RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 LRRC23Q53EV4 343 aaPredicted RBP15.17■□□□□ 0.02
CHMP1A-208ENST00000550102 H1FNTQ75WM6 255 aaPredicted RBP15.17■□□□□ 0.02
CHMP1A-208ENST00000550102 CARM1Q86X55 608 aa15.17■□□□□ 0.02
CHMP1A-208ENST00000550102 TREML1Q86YW5 311 aa15.17■□□□□ 0.02
CHMP1A-208ENST00000550102 RBM45Q8IUH3 476 aaKnown RBP15.17■□□□□ 0.02
CHMP1A-208ENST00000550102 C17orf78Q8N4C9 275 aa15.17■□□□□ 0.02
CHMP1A-208ENST00000550102 C10orf53Q8N6V4 93 aa15.17■□□□□ 0.02
CHMP1A-208ENST00000550102 SCAIQ8N9R8 606 aa15.17■□□□□ 0.02
CHMP1A-208ENST00000550102 OXGR1Q96P68 337 aa15.17■□□□□ 0.02
CHMP1A-208ENST00000550102 CCL19Q99731 98 aa15.17■□□□□ 0.02
CHMP1A-208ENST00000550102 AMBRA1Q9C0C7 1298 aa15.17■□□□□ 0.02
CHMP1A-208ENST00000550102 EFCAB1Q9HAE3 211 aa15.17■□□□□ 0.02
CHMP1A-208ENST00000550102 SLC7A7Q9UM01 511 aa15.17■□□□□ 0.02
CHMP1A-208ENST00000550102 ELOVL7A1L3X0 281 aa15.16■□□□□ 0.02
CHMP1A-208ENST00000550102 GMNCA6NCL1 334 aa15.16■□□□□ 0.02
CHMP1A-208ENST00000550102 ZNF587BE7ETH6 402 aa15.16■□□□□ 0.02
CHMP1A-208ENST00000550102 HS3ST1O14792 307 aa15.16■□□□□ 0.02
CHMP1A-208ENST00000550102 AKAP8O43823 692 aaKnown RBP15.16■□□□□ 0.02
CHMP1A-208ENST00000550102 BGLAPP02818 100 aa15.16■□□□□ 0.02
CHMP1A-208ENST00000550102 CBLP22681 906 aa15.16■□□□□ 0.02
CHMP1A-208ENST00000550102 MPGP29372 298 aa15.16■□□□□ 0.02
CHMP1A-208ENST00000550102 HOXC12P31275 282 aa15.16■□□□□ 0.02
CHMP1A-208ENST00000550102 SLC7A2P52569 658 aa15.16■□□□□ 0.02
CHMP1A-208ENST00000550102 GNGT1P63211 74 aa15.16■□□□□ 0.02
CHMP1A-208ENST00000550102 BSPH1Q075Z2 132 aa15.16■□□□□ 0.02
CHMP1A-208ENST00000550102 C1DQ13901 141 aaKnown RBP15.16■□□□□ 0.02
CHMP1A-208ENST00000550102 GABRA6Q16445 453 aa15.16■□□□□ 0.02
CHMP1A-208ENST00000550102 CYBRD1Q53TN4 286 aa15.16■□□□□ 0.02
CHMP1A-208ENST00000550102 NCMAPQ5T1S8 102 aa15.16■□□□□ 0.02
CHMP1A-208ENST00000550102 C9orf135Q5VTT2 229 aa15.16■□□□□ 0.02
CHMP1A-208ENST00000550102 NIPAL3Q6P499 406 aa15.16■□□□□ 0.02
CHMP1A-208ENST00000550102 HACD2Q6Y1H2 254 aa15.16■□□□□ 0.02
CHMP1A-208ENST00000550102 EPHX4Q8IUS5 362 aa15.16■□□□□ 0.02
CHMP1A-208ENST00000550102 PIGTQ969N2 578 aa15.16■□□□□ 0.02
CHMP1A-208ENST00000550102 CMTM5Q96DZ9 223 aa15.16■□□□□ 0.02
CHMP1A-208ENST00000550102 MPP4Q96JB8 637 aa15.16■□□□□ 0.02
CHMP1A-208ENST00000550102 ALKBH3Q96Q83 286 aaPredicted RBP15.16■□□□□ 0.02
CHMP1A-208ENST00000550102 MYLK2Q9H1R3 596 aa15.16■□□□□ 0.02
CHMP1A-208ENST00000550102 CMTM6Q9NX76 183 aa15.16■□□□□ 0.02
CHMP1A-208ENST00000550102 B3GAT1Q9P2W7 334 aa15.16■□□□□ 0.02
CHMP1A-208ENST00000550102 SH3GLB1Q9Y371 365 aa15.16■□□□□ 0.02
CHMP1A-208ENST00000550102 HEATR1Q9H583 2144 aaKnown RBP15.16■□□□□ 0.02
CHMP1A-208ENST00000550102 CLOCKO15516 846 aa15.15■□□□□ 0.02
CHMP1A-208ENST00000550102 PLAUP00749 431 aa15.15■□□□□ 0.02
CHMP1A-208ENST00000550102 MT-ATP6P00846 226 aa15.15■□□□□ 0.02
CHMP1A-208ENST00000550102 KDELR2P33947 212 aa15.15■□□□□ 0.02
CHMP1A-208ENST00000550102 SELENOPP49908 381 aa15.15■□□□□ 0.02
CHMP1A-208ENST00000550102 GYS2P54840 703 aa15.15■□□□□ 0.02
CHMP1A-208ENST00000550102 FOXG1P55316 489 aaPredicted RBP15.15■□□□□ 0.02
CHMP1A-208ENST00000550102 CLDN17P56750 224 aa15.15■□□□□ 0.02
CHMP1A-208ENST00000550102 KLHL24Q6TFL4 600 aa15.15■□□□□ 0.02
CHMP1A-208ENST00000550102 WDR88Q6ZMY6 472 aa15.15■□□□□ 0.02
CHMP1A-208ENST00000550102 TSPYL5Q86VY4 417 aaPredicted RBP15.15■□□□□ 0.02
CHMP1A-208ENST00000550102 SLC15A3Q8IY34 581 aa15.15■□□□□ 0.02
CHMP1A-208ENST00000550102 KDM8Q8N371 416 aa15.15■□□□□ 0.02
CHMP1A-208ENST00000550102 OR52N5Q8NH56 324 aa15.15■□□□□ 0.02
CHMP1A-208ENST00000550102 SLC41A3Q96GZ6 507 aa15.15■□□□□ 0.02
CHMP1A-208ENST00000550102 MUS81Q96NY9 551 aa15.15■□□□□ 0.02
CHMP1A-208ENST00000550102 MOGAT1Q96PD6 335 aa15.15■□□□□ 0.02
CHMP1A-208ENST00000550102 PIP5K1AQ99755 562 aa15.15■□□□□ 0.02
CHMP1A-208ENST00000550102 HOPXQ9BPY8 73 aaPredicted RBP15.15■□□□□ 0.02
CHMP1A-208ENST00000550102 POLR2J2Q9GZM3 115 aaKnown RBP15.15■□□□□ 0.02
CHMP1A-208ENST00000550102 POLR2J3Q9H1A7 115 aaKnown RBP15.15■□□□□ 0.02
CHMP1A-208ENST00000550102 MRPL39Q9NYK5 338 aaKnown RBP15.15■□□□□ 0.02
CHMP1A-208ENST00000550102 NPAP1Q9NZP6 1156 aa15.15■□□□□ 0.02
CHMP1A-208ENST00000550102 MTORP42345 2549 aa15.14■□□□□ 0.01
CHMP1A-208ENST00000550102 LOC102725191A0A1B0GVB3 256 aa15.14■□□□□ 0.01
CHMP1A-208ENST00000550102 NME4O00746 187 aa15.14■□□□□ 0.01
CHMP1A-208ENST00000550102 NDUFAB1O14561 156 aa15.14■□□□□ 0.01
CHMP1A-208ENST00000550102 DYNC1I1O14576 645 aa15.14■□□□□ 0.01
CHMP1A-208ENST00000550102 TRAF3IP2O43734 574 aaPredicted RBP15.14■□□□□ 0.01
CHMP1A-208ENST00000550102 LYPD3O95274 346 aa15.14■□□□□ 0.01
CHMP1A-208ENST00000550102 THY1P04216 161 aa15.14■□□□□ 0.01
CHMP1A-208ENST00000550102 TNFRSF1BP20333 461 aa15.14■□□□□ 0.01
CHMP1A-208ENST00000550102 PRDX6P30041 224 aa15.14■□□□□ 0.01
CHMP1A-208ENST00000550102 TAS2R41P59536 307 aa15.14■□□□□ 0.01
CHMP1A-208ENST00000550102 LIPEQ05469 1076 aa15.14■□□□□ 0.01
CHMP1A-208ENST00000550102 PUDPQ08623 228 aa15.14■□□□□ 0.01
CHMP1A-208ENST00000550102 PMS2P3Q13401 168 aa15.14■□□□□ 0.01
CHMP1A-208ENST00000550102 C1QTNF12Q5T7M4 302 aa15.14■□□□□ 0.01
CHMP1A-208ENST00000550102 C8orf82Q6P1X6 216 aaPredicted RBP15.14■□□□□ 0.01
CHMP1A-208ENST00000550102 TTC33Q6PID6 262 aaPredicted RBP15.14■□□□□ 0.01
CHMP1A-208ENST00000550102 KLHL17Q6TDP4 642 aa15.14■□□□□ 0.01
CHMP1A-208ENST00000550102 LINC00114Q6XXX2 140 aa15.14■□□□□ 0.01
CHMP1A-208ENST00000550102 DEF8Q6ZN54 512 aa15.14■□□□□ 0.01
CHMP1A-208ENST00000550102 UEVLDQ8IX04 471 aa15.14■□□□□ 0.01
CHMP1A-208ENST00000550102 AKAP1Q92667 903 aaKnown RBP eCLIP15.14■□□□□ 0.013e-10■■■■■ 35.1
CHMP1A-208ENST00000550102 ZNF426Q9BUY5 554 aa15.14■□□□□ 0.01
CHMP1A-208ENST00000550102 LINC00470Q9BZP3 86 aa15.14■□□□□ 0.01
CHMP1A-208ENST00000550102 SLC19A3Q9BZV2 496 aa15.14■□□□□ 0.01
CHMP1A-208ENST00000550102 ALG2Q9H553 416 aa15.14■□□□□ 0.01
CHMP1A-208ENST00000550102 AMDHD2Q9Y303 409 aa15.14■□□□□ 0.01
CHMP1A-208ENST00000550102 SLC25A15Q9Y619 301 aa15.14■□□□□ 0.01
CHMP1A-208ENST00000550102 ACANP16112 2415 aa15.13■□□□□ 0.01
CHMP1A-208ENST00000550102 SMPD2O60906 423 aa15.13■□□□□ 0.01
CHMP1A-208ENST00000550102 SLC43A1O75387 559 aa15.13■□□□□ 0.01
CHMP1A-208ENST00000550102 OR5F1O95221 314 aa15.13■□□□□ 0.01
CHMP1A-208ENST00000550102 CDH2P19022 906 aaPredicted RBP15.13■□□□□ 0.01
CHMP1A-208ENST00000550102 SH3BGRP55822 239 aaPredicted RBP15.13■□□□□ 0.01
CHMP1A-208ENST00000550102 POU3F1Q03052 451 aaPredicted RBP15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms