RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 ZNF432O94892 652 aa8.5□□□□□ -1.05
TRAFD1-207ENST00000550051 ADRA2AP08913 450 aa8.5□□□□□ -1.05
TRAFD1-207ENST00000550051 S100A3P33764 101 aa8.5□□□□□ -1.05
TRAFD1-207ENST00000550051 TUBA1BP68363 451 aa8.5□□□□□ -1.05
TRAFD1-207ENST00000550051 TUBA4AP68366 448 aa8.5□□□□□ -1.05
TRAFD1-207ENST00000550051 ARF1P84077 181 aaKnown RBP8.5□□□□□ -1.05
TRAFD1-207ENST00000550051 SCGB2A2Q13296 93 aa8.5□□□□□ -1.05
TRAFD1-207ENST00000550051 TRIP10Q15642 601 aa8.5□□□□□ -1.05
TRAFD1-207ENST00000550051 FAM174BQ3ZCQ3 159 aa8.5□□□□□ -1.05
TRAFD1-207ENST00000550051 SLC9B1Q4ZJI4 515 aa8.5□□□□□ -1.05
TRAFD1-207ENST00000550051 SPANXN4Q5MJ08 99 aa8.5□□□□□ -1.05
TRAFD1-207ENST00000550051 C1orf140Q5VVS0 124 aa8.5□□□□□ -1.05
TRAFD1-207ENST00000550051 TUBA1AQ71U36 451 aa8.5□□□□□ -1.05
TRAFD1-207ENST00000550051 RNF130Q86XS8 419 aa8.5□□□□□ -1.05
TRAFD1-207ENST00000550051 PEX5LQ8IYB4 626 aa8.5□□□□□ -1.05
TRAFD1-207ENST00000550051 TRIML2Q8N7C3 387 aa8.5□□□□□ -1.05
TRAFD1-207ENST00000550051 MFSD8Q8NHS3 518 aa8.5□□□□□ -1.05
TRAFD1-207ENST00000550051 KIF18AQ8NI77 898 aa8.5□□□□□ -1.05
TRAFD1-207ENST00000550051 STK35Q8TDR2 534 aa8.5□□□□□ -1.05
TRAFD1-207ENST00000550051 FAM216AQ8WUB2 273 aa8.5□□□□□ -1.05
TRAFD1-207ENST00000550051 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.5□□□□□ -1.05
TRAFD1-207ENST00000550051 ZMYND19Q96E35 227 aaPredicted RBP8.5□□□□□ -1.05
TRAFD1-207ENST00000550051 MS4A5Q9H3V2 200 aa8.5□□□□□ -1.05
TRAFD1-207ENST00000550051 ADPRHL2Q9NX46 363 aa8.5□□□□□ -1.05
TRAFD1-207ENST00000550051 B3GNT2Q9NY97 397 aa8.5□□□□□ -1.05
TRAFD1-207ENST00000550051 RCE1Q9Y256 329 aa8.5□□□□□ -1.05
TRAFD1-207ENST00000550051 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.5□□□□□ -1.05
TRAFD1-207ENST00000550051 CMAHPQ9Y471 501 aa8.5□□□□□ -1.05
TRAFD1-207ENST00000550051 SPEF1Q9Y4P9 236 aa8.5□□□□□ -1.05
TRAFD1-207ENST00000550051 FTCDNL1E5RQL4 147 aa8.49□□□□□ -1.05
TRAFD1-207ENST00000550051 LYNX1G3V0Z9 82 aa8.49□□□□□ -1.05
TRAFD1-207ENST00000550051 SYNGR3O43761 229 aa8.49□□□□□ -1.05
TRAFD1-207ENST00000550051 FZD7O75084 574 aa8.49□□□□□ -1.05
TRAFD1-207ENST00000550051 SPAG7O75391 227 aa8.49□□□□□ -1.05
TRAFD1-207ENST00000550051 CELA3BP08861 270 aa8.49□□□□□ -1.05
TRAFD1-207ENST00000550051 MYZAPP0CAP1 466 aa8.49□□□□□ -1.05
TRAFD1-207ENST00000550051 GKN3PP0CG01 181 aa8.49□□□□□ -1.05
TRAFD1-207ENST00000550051 LYNX1P0DP58 116 aa8.49□□□□□ -1.05
TRAFD1-207ENST00000550051 NR2F1P10589 423 aa8.49□□□□□ -1.05
TRAFD1-207ENST00000550051 NR4A1P22736 598 aa8.49□□□□□ -1.05
TRAFD1-207ENST00000550051 ETV4P43268 484 aa8.49□□□□□ -1.05
TRAFD1-207ENST00000550051 CLNS1AP54105 237 aaKnown RBP8.49□□□□□ -1.05
TRAFD1-207ENST00000550051 TMEM33P57088 247 aa8.49□□□□□ -1.05
TRAFD1-207ENST00000550051 COPZ1P61923 177 aa8.49□□□□□ -1.05
TRAFD1-207ENST00000550051 LRRC74AQ0VAA2 488 aa8.49□□□□□ -1.05
TRAFD1-207ENST00000550051 BNIP2Q12982 314 aa8.49□□□□□ -1.05
TRAFD1-207ENST00000550051 MAPK11Q15759 364 aa8.49□□□□□ -1.05
TRAFD1-207ENST00000550051 ELFN2Q5R3F8 820 aa8.49□□□□□ -1.05
TRAFD1-207ENST00000550051 PRAMEF8Q5VWM4 474 aa8.49□□□□□ -1.05
TRAFD1-207ENST00000550051 PRAMEF7Q5VXH5 474 aa8.49□□□□□ -1.05
TRAFD1-207ENST00000550051 USP43Q70EL4 1123 aa8.49□□□□□ -1.05
TRAFD1-207ENST00000550051 MYPOPQ86VE0 399 aaPredicted RBP8.49□□□□□ -1.05
TRAFD1-207ENST00000550051 GLCCI1Q86VQ1 547 aa8.49□□□□□ -1.05
TRAFD1-207ENST00000550051 GSPT2Q8IYD1 628 aaKnown RBP8.49□□□□□ -1.05
TRAFD1-207ENST00000550051 CDK20Q8IZL9 346 aa8.49□□□□□ -1.05
TRAFD1-207ENST00000550051 OR52P1PQ8NH57 321 aa8.49□□□□□ -1.05
TRAFD1-207ENST00000550051 TMEM186Q96B77 213 aa8.49□□□□□ -1.05
TRAFD1-207ENST00000550051 OXGR1Q96P68 337 aa8.49□□□□□ -1.05
TRAFD1-207ENST00000550051 ALKBH3Q96Q83 286 aaPredicted RBP8.49□□□□□ -1.05
TRAFD1-207ENST00000550051 METTL17Q9H7H0 456 aaPredicted RBP8.49□□□□□ -1.05
TRAFD1-207ENST00000550051 GPR35Q9HC97 309 aa8.49□□□□□ -1.05
TRAFD1-207ENST00000550051 DYNLRB1Q9NP97 96 aa8.49□□□□□ -1.05
TRAFD1-207ENST00000550051 HIF1ANQ9NWT6 349 aa8.49□□□□□ -1.05
TRAFD1-207ENST00000550051 REV1Q9UBZ9 1251 aa8.49□□□□□ -1.05
TRAFD1-207ENST00000550051 LGALS13Q9UHV8 139 aa8.49□□□□□ -1.05
TRAFD1-207ENST00000550051 ZNF232Q9UNY5 417 aa8.49□□□□□ -1.05
TRAFD1-207ENST00000550051 DSPPQ9NZW4 1301 aa8.49□□□□□ -1.05
TRAFD1-207ENST00000550051 ZNF503-AS2A6NEH8 195 aa8.48□□□□□ -1.05
TRAFD1-207ENST00000550051 E9PBE3 544 aa8.48□□□□□ -1.05
TRAFD1-207ENST00000550051 FRS3O43559 492 aa8.48□□□□□ -1.05
TRAFD1-207ENST00000550051 ITM2AO43736 263 aa8.48□□□□□ -1.05
TRAFD1-207ENST00000550051 TYROBPO43914 113 aa8.48□□□□□ -1.05
TRAFD1-207ENST00000550051 SLC43A1O75387 559 aa8.48□□□□□ -1.05
TRAFD1-207ENST00000550051 KRT75O95678 551 aa8.48□□□□□ -1.05
TRAFD1-207ENST00000550051 MSMBP08118 114 aa8.48□□□□□ -1.05
TRAFD1-207ENST00000550051 ZNF35P13682 527 aa8.48□□□□□ -1.05
TRAFD1-207ENST00000550051 ZNF43P17038 809 aa8.48□□□□□ -1.05
TRAFD1-207ENST00000550051 LBPP18428 481 aa8.48□□□□□ -1.05
TRAFD1-207ENST00000550051 COL8A2P25067 703 aa8.48□□□□□ -1.05
TRAFD1-207ENST00000550051 GLRXP35754 106 aa8.48□□□□□ -1.05
TRAFD1-207ENST00000550051 ARFIP2P53365 341 aa8.48□□□□□ -1.05
TRAFD1-207ENST00000550051 CLDN17P56750 224 aa8.48□□□□□ -1.05
TRAFD1-207ENST00000550051 MRPS11P82912 194 aaKnown RBP8.48□□□□□ -1.05
TRAFD1-207ENST00000550051 PRR20EP86478 221 aa8.48□□□□□ -1.05
TRAFD1-207ENST00000550051 PRR20CP86479 221 aa8.48□□□□□ -1.05
TRAFD1-207ENST00000550051 PRR20DP86480 221 aa8.48□□□□□ -1.05
TRAFD1-207ENST00000550051 PRR20BP86481 221 aa8.48□□□□□ -1.05
TRAFD1-207ENST00000550051 PRR20AP86496 221 aa8.48□□□□□ -1.05
TRAFD1-207ENST00000550051 IL1RL1Q01638 556 aa8.48□□□□□ -1.05
TRAFD1-207ENST00000550051 DAG1Q14118 895 aa8.48□□□□□ -1.05
TRAFD1-207ENST00000550051 PDCD2Q16342 344 aaPredicted RBP8.48□□□□□ -1.05
TRAFD1-207ENST00000550051 COX20Q5RI15 118 aa8.48□□□□□ -1.05
TRAFD1-207ENST00000550051 RNF220Q5VTB9 566 aa8.48□□□□□ -1.05
TRAFD1-207ENST00000550051 REP15Q6BDI9 236 aa8.48□□□□□ -1.05
TRAFD1-207ENST00000550051 RINLQ6ZS11 566 aa8.48□□□□□ -1.05
TRAFD1-207ENST00000550051 ZNF621Q6ZSS3 439 aa8.48□□□□□ -1.05
TRAFD1-207ENST00000550051 ZNF627Q7L945 461 aa8.48□□□□□ -1.05
TRAFD1-207ENST00000550051 LSRQ86X29 649 aaPredicted RBP8.48□□□□□ -1.05
TRAFD1-207ENST00000550051 VRK2Q86Y07 508 aa8.48□□□□□ -1.05
TRAFD1-207ENST00000550051 NUDCD3Q8IVD9 361 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms