RNA–Protein interactions for RNA: ENST00000549414.6

CUX1-213, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-213ENST00000549414 EFCAB7A8K855 629 aa14.98□□□□□ -0.01
CUX1-213ENST00000549414 RLN2P04090 185 aa14.98□□□□□ -0.01
CUX1-213ENST00000549414 HBQ1P09105 142 aa14.98□□□□□ -0.01
CUX1-213ENST00000549414 FOLR3P41439 243 aa14.98□□□□□ -0.01
CUX1-213ENST00000549414 RBM34P42696 430 aaKnown RBP14.98□□□□□ -0.01
CUX1-213ENST00000549414 EFR3AQ14156 821 aa14.98□□□□□ -0.01
CUX1-213ENST00000549414 HBMQ6B0K9 141 aa14.98□□□□□ -0.01
CUX1-213ENST00000549414 ABHD12BQ7Z5M8 362 aaPredicted RBP14.98□□□□□ -0.01
CUX1-213ENST00000549414 NOXA1Q86UR1 476 aa14.98□□□□□ -0.01
CUX1-213ENST00000549414 CCDC36Q8IYA8 594 aa14.98□□□□□ -0.01
CUX1-213ENST00000549414 GPR137CQ8N3F9 429 aa14.98□□□□□ -0.01
CUX1-213ENST00000549414 HAVCR1Q96D42 359 aa14.98□□□□□ -0.01
CUX1-213ENST00000549414 TMED7Q9Y3B3 224 aa14.98□□□□□ -0.01
CUX1-213ENST00000549414 TRDV1A0A1B0GX56 115 aa14.98□□□□□ -0.01
CUX1-213ENST00000549414 TMEM129A0AVI4 362 aa14.98□□□□□ -0.01
CUX1-213ENST00000549414 THBS1P07996 1170 aa14.98□□□□□ -0.01
CUX1-213ENST00000549414 CAMK2DQ13557 499 aa14.98□□□□□ -0.01
CUX1-213ENST00000549414 MANEAQ5SRI9 462 aa14.98□□□□□ -0.01
CUX1-213ENST00000549414 PM20D2Q8IYS1 436 aa14.98□□□□□ -0.01
CUX1-213ENST00000549414 OR13C5Q8NGS8 318 aa14.98□□□□□ -0.01
CUX1-213ENST00000549414 OR2A14Q96R47 310 aa14.98□□□□□ -0.01
CUX1-213ENST00000549414 URM1Q9BTM9 101 aaKnown RBP14.98□□□□□ -0.01
CUX1-213ENST00000549414 PRDM9Q9NQV7 894 aa14.98□□□□□ -0.01
CUX1-213ENST00000549414 OSGIN1Q9UJX0 560 aa14.98□□□□□ -0.01
CUX1-213ENST00000549414 SFTPBP07988 381 aa14.98□□□□□ -0.01
CUX1-213ENST00000549414 DAP3P51398 398 aaKnown RBP14.98□□□□□ -0.01
CUX1-213ENST00000549414 DEFA5Q01523 94 aa14.98□□□□□ -0.01
CUX1-213ENST00000549414 FGL2Q14314 439 aa14.98□□□□□ -0.01
CUX1-213ENST00000549414 ZMAT1Q5H9K5 638 aa14.98□□□□□ -0.01
CUX1-213ENST00000549414 OR4C15Q8NGM1 316 aa14.98□□□□□ -0.01
CUX1-213ENST00000549414 OR52N1Q8NH53 320 aa14.98□□□□□ -0.01
CUX1-213ENST00000549414 DHRS1Q96LJ7 313 aa14.98□□□□□ -0.01
CUX1-213ENST00000549414 CCNL2Q96S94 520 aaPredicted RBP14.98□□□□□ -0.01
CUX1-213ENST00000549414 OR51J1Q9H342 316 aa14.98□□□□□ -0.01
CUX1-213ENST00000549414 RANBP3Q9H6Z4 567 aaPredicted RBP14.98□□□□□ -0.01
CUX1-213ENST00000549414 FBXO34Q9NWN3 711 aa14.98□□□□□ -0.01
CUX1-213ENST00000549414 MYO16Q9Y6X6 1858 aa14.97□□□□□ -0.01
CUX1-213ENST00000549414 SPTY2D1-AS1A0A0U1RR47 76 aa14.97□□□□□ -0.01
CUX1-213ENST00000549414 PIPP12273 146 aaPredicted RBP14.97□□□□□ -0.01
CUX1-213ENST00000549414 AMY2BP19961 511 aa14.97□□□□□ -0.01
CUX1-213ENST00000549414 HLA-DMAP28067 261 aa14.97□□□□□ -0.01
CUX1-213ENST00000549414 EMDP50402 254 aa14.97□□□□□ -0.01
CUX1-213ENST00000549414 DCAF7P61962 342 aa14.97□□□□□ -0.01
CUX1-213ENST00000549414 GLYR1Q49A26 553 aaPredicted RBP14.97□□□□□ -0.01
CUX1-213ENST00000549414 RNF165Q6ZSG1 346 aa14.97□□□□□ -0.01
CUX1-213ENST00000549414 BCORP1Q8N888 145 aa14.97□□□□□ -0.01
CUX1-213ENST00000549414 OR2S2Q9NQN1 319 aa14.97□□□□□ -0.01
CUX1-213ENST00000549414 GPATCH2Q9NW75 528 aa14.97□□□□□ -0.01
CUX1-213ENST00000549414 ACAD8Q9UKU7 415 aa14.97□□□□□ -0.01
CUX1-213ENST00000549414 HHLA2Q9UM44 414 aa14.97□□□□□ -0.01
CUX1-213ENST00000549414 CHST2Q9Y4C5 530 aa14.97□□□□□ -0.01
CUX1-213ENST00000549414 EEF1E1-BLOC1S5C9J1V9 151 aa14.97□□□□□ -0.01
CUX1-213ENST00000549414 M0R082 166 aa14.97□□□□□ -0.01
CUX1-213ENST00000549414 TMEM225BP0DP42 221 aa14.97□□□□□ -0.01
CUX1-213ENST00000549414 FABP5Q01469 135 aa14.97□□□□□ -0.01
CUX1-213ENST00000549414 DBPQ10586 325 aaPredicted RBP14.97□□□□□ -0.01
CUX1-213ENST00000549414 FAM27D1Q5T7N8 215 aa14.97□□□□□ -0.01
CUX1-213ENST00000549414 AGAP7PQ5VUJ5 663 aa14.97□□□□□ -0.01
CUX1-213ENST00000549414 GARNL3Q5VVW2 1013 aa14.97□□□□□ -0.01
CUX1-213ENST00000549414 TMEM205Q6UW68 189 aa14.97□□□□□ -0.01
CUX1-213ENST00000549414 VN1R4Q7Z5H5 301 aa14.97□□□□□ -0.01
CUX1-213ENST00000549414 NAA11Q9BSU3 229 aaPredicted RBP14.97□□□□□ -0.01
CUX1-213ENST00000549414 HRO43593 1189 aa14.97□□□□□ -0.01
CUX1-213ENST00000549414 EML2O95834 649 aa14.97□□□□□ -0.01
CUX1-213ENST00000549414 MEP1BQ16820 701 aa14.97□□□□□ -0.01
CUX1-213ENST00000549414 NDUFAF7Q7L592 441 aa14.97□□□□□ -0.01
CUX1-213ENST00000549414 OR4M1Q8NGD0 313 aa14.97□□□□□ -0.01
CUX1-213ENST00000549414 WDR34Q96EX3 536 aa14.97□□□□□ -0.01
CUX1-213ENST00000549414 ZNF717Q9BY31 904 aaPredicted RBP14.97□□□□□ -0.01
CUX1-213ENST00000549414 ACOXLQ9NUZ1 547 aa14.97□□□□□ -0.01
CUX1-213ENST00000549414 PLEK2Q9NYT0 353 aa14.97□□□□□ -0.01
CUX1-213ENST00000549414 COPZ2Q9P299 210 aa14.97□□□□□ -0.01
CUX1-213ENST00000549414 SLC6A5Q9Y345 797 aa14.97□□□□□ -0.01
CUX1-213ENST00000549414 MAB21L2Q9Y586 359 aa14.97□□□□□ -0.01
CUX1-213ENST00000549414 NTN1O95631 604 aa14.96□□□□□ -0.01
CUX1-213ENST00000549414 IFNA21P01568 189 aa14.96□□□□□ -0.01
CUX1-213ENST00000549414 SRFP11831 508 aa14.96□□□□□ -0.01
CUX1-213ENST00000549414 CSRP3P50461 194 aa14.96□□□□□ -0.01
CUX1-213ENST00000549414 PLP2Q04941 152 aa14.96□□□□□ -0.01
CUX1-213ENST00000549414 FAM205BPQ63HN1 556 aa14.96□□□□□ -0.01
CUX1-213ENST00000549414 LYPD4Q6UWN0 246 aa14.96□□□□□ -0.01
CUX1-213ENST00000549414 DPY19L2P2Q6ZN68 376 aa14.96□□□□□ -0.01
CUX1-213ENST00000549414 OR5J2Q8NH18 312 aa14.96□□□□□ -0.01
CUX1-213ENST00000549414 ADAMTS14Q8WXS8 1223 aa14.96□□□□□ -0.01
CUX1-213ENST00000549414 ZNF350Q9GZX5 532 aa14.96□□□□□ -0.01
CUX1-213ENST00000549414 NXF5Q9H1B4 397 aaKnown RBP14.96□□□□□ -0.01
CUX1-213ENST00000549414 ANKRD10Q9NXR5 420 aa14.96□□□□□ -0.01
CUX1-213ENST00000549414 C14orf166Q9Y224 244 aaKnown RBP14.96□□□□□ -0.01
CUX1-213ENST00000549414 LCTP09848 1927 aa14.96□□□□□ -0.01
CUX1-213ENST00000549414 A0A0G2JMP0 313 aa14.96□□□□□ -0.01
CUX1-213ENST00000549414 A6NIZ1 184 aa14.96□□□□□ -0.01
CUX1-213ENST00000549414 CENPBD1B2RD01 187 aa14.96□□□□□ -0.01
CUX1-213ENST00000549414 RAB3DO95716 219 aa14.96□□□□□ -0.01
CUX1-213ENST00000549414 ERCC1P07992 297 aaPredicted RBP14.96□□□□□ -0.01
CUX1-213ENST00000549414 ARSBP15848 533 aa14.96□□□□□ -0.01
CUX1-213ENST00000549414 RAP1BP61224 184 aa14.96□□□□□ -0.01
CUX1-213ENST00000549414 RAP1AP62834 184 aa14.96□□□□□ -0.01
CUX1-213ENST00000549414 SRSF5Q13243 272 aaKnown RBP14.96□□□□□ -0.01
CUX1-213ENST00000549414 GPR50Q13585 617 aa14.96□□□□□ -0.01
CUX1-213ENST00000549414 GRK1Q15835 563 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms