RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 LYPD3O95274 346 aa13.88□□□□□ -0.19
DDX54-205ENST00000548786 CNOT4O95628 575 aaKnown RBP13.88□□□□□ -0.19
DDX54-205ENST00000548786 HPRP00739 348 aa13.88□□□□□ -0.19
DDX54-205ENST00000548786 BGLAPP02818 100 aa13.88□□□□□ -0.19
DDX54-205ENST00000548786 ZNF43P17038 809 aa13.88□□□□□ -0.19
DDX54-205ENST00000548786 KDELR2P33947 212 aa13.88□□□□□ -0.19
DDX54-205ENST00000548786 ZNF83P51522 516 aa13.88□□□□□ -0.19
DDX54-205ENST00000548786 NR1H2P55055 460 aa13.88□□□□□ -0.19
DDX54-205ENST00000548786 PMS2P3Q13401 168 aa13.88□□□□□ -0.19
DDX54-205ENST00000548786 VEZF1Q14119 521 aa13.88□□□□□ -0.19
DDX54-205ENST00000548786 ACKR1Q16570 336 aa13.88□□□□□ -0.19
DDX54-205ENST00000548786 DEFB113Q30KQ7 82 aa13.88□□□□□ -0.19
DDX54-205ENST00000548786 SWT1Q5T5J6 900 aaKnown RBP13.88□□□□□ -0.19
DDX54-205ENST00000548786 CARD17Q5XLA6 110 aa13.88□□□□□ -0.19
DDX54-205ENST00000548786 ADAM5Q6NVV9 412 aa13.88□□□□□ -0.19
DDX54-205ENST00000548786 C5orf46Q6UWT4 87 aa13.88□□□□□ -0.19
DDX54-205ENST00000548786 SEZ6L2Q6UXD5 910 aa13.88□□□□□ -0.19
DDX54-205ENST00000548786 H1FNTQ75WM6 255 aaPredicted RBP13.88□□□□□ -0.19
DDX54-205ENST00000548786 ARPINQ7Z6K5 226 aa13.88□□□□□ -0.19
DDX54-205ENST00000548786 KBTBD8Q8NFY9 601 aa13.88□□□□□ -0.19
DDX54-205ENST00000548786 NEUROG1Q92886 237 aa13.88□□□□□ -0.19
DDX54-205ENST00000548786 CCL19Q99731 98 aa13.88□□□□□ -0.19
DDX54-205ENST00000548786 ASPNQ9BXN1 380 aa13.88□□□□□ -0.19
DDX54-205ENST00000548786 NGBQ9NPG2 151 aa13.88□□□□□ -0.19
DDX54-205ENST00000548786 NPAP1Q9NZP6 1156 aa13.88□□□□□ -0.19
DDX54-205ENST00000548786 B3GAT1Q9P2W7 334 aa13.88□□□□□ -0.19
DDX54-205ENST00000548786 BAG5Q9UL15 447 aa13.88□□□□□ -0.19
DDX54-205ENST00000548786 PRRC2AP48634 2157 aaKnown RBP13.88□□□□□ -0.19
DDX54-205ENST00000548786 DPRXA6NFQ7 191 aa13.87□□□□□ -0.19
DDX54-205ENST00000548786 DYNC1I1O14576 645 aa13.87□□□□□ -0.19
DDX54-205ENST00000548786 UPK3AO75631 287 aa13.87□□□□□ -0.19
DDX54-205ENST00000548786 IFNA14P01570 189 aa13.87□□□□□ -0.19
DDX54-205ENST00000548786 CD3EP07766 207 aa13.87□□□□□ -0.19
DDX54-205ENST00000548786 HLA-DOBP13765 273 aa13.87□□□□□ -0.19
DDX54-205ENST00000548786 GSK3BP49841 420 aa13.87□□□□□ -0.19
DDX54-205ENST00000548786 TAS2R41P59536 307 aa13.87□□□□□ -0.19
DDX54-205ENST00000548786 GABRA6Q16445 453 aa13.87□□□□□ -0.19
DDX54-205ENST00000548786 HIKESHIQ53FT3 197 aa13.87□□□□□ -0.19
DDX54-205ENST00000548786 TIMM23BQ5SRD1 257 aa13.87□□□□□ -0.19
DDX54-205ENST00000548786 NCMAPQ5T1S8 102 aa13.87□□□□□ -0.19
DDX54-205ENST00000548786 TTC33Q6PID6 262 aaPredicted RBP13.87□□□□□ -0.19
DDX54-205ENST00000548786 LINGO2Q7L985 606 aa13.87□□□□□ -0.19
DDX54-205ENST00000548786 AKAP1Q92667 903 aaKnown RBP eCLIP13.87□□□□□ -0.19
DDX54-205ENST00000548786 CMTM5Q96DZ9 223 aa13.87□□□□□ -0.19
DDX54-205ENST00000548786 SLC41A3Q96GZ6 507 aa13.87□□□□□ -0.19
DDX54-205ENST00000548786 OXGR1Q96P68 337 aa13.87□□□□□ -0.19
DDX54-205ENST00000548786 FOXC2Q99958 501 aa13.87□□□□□ -0.19
DDX54-205ENST00000548786 TMEM43Q9BTV4 400 aa13.87□□□□□ -0.19
DDX54-205ENST00000548786 ESRP2Q9H6T0 727 aaKnown RBP13.87□□□□□ -0.19
DDX54-205ENST00000548786 B3GALT5Q9Y2C3 310 aa13.87□□□□□ -0.19
DDX54-205ENST00000548786 RNF115Q9Y4L5 304 aa13.87□□□□□ -0.19
DDX54-205ENST00000548786 ZNF587BE7ETH6 402 aa13.86□□□□□ -0.19
DDX54-205ENST00000548786 C11orf98E9PRG8 122 aa13.86□□□□□ -0.19
DDX54-205ENST00000548786 M0R1B8 84 aa13.86□□□□□ -0.19
DDX54-205ENST00000548786 PDLIM1O00151 329 aa13.86□□□□□ -0.19
DDX54-205ENST00000548786 CXCR6O00574 342 aa13.86□□□□□ -0.19
DDX54-205ENST00000548786 ZNF682O95780 498 aa13.86□□□□□ -0.19
DDX54-205ENST00000548786 CH25HO95992 272 aa13.86□□□□□ -0.19
DDX54-205ENST00000548786 NCK1P16333 377 aa13.86□□□□□ -0.19
DDX54-205ENST00000548786 AHCYP23526 432 aa13.86□□□□□ -0.19
DDX54-205ENST00000548786 YAP1P46937 504 aaKnown RBP13.86□□□□□ -0.19
DDX54-205ENST00000548786 PSME3P61289 254 aa13.86□□□□□ -0.19
DDX54-205ENST00000548786 SLC25A3Q00325 362 aa13.86□□□□□ -0.19
DDX54-205ENST00000548786 POU3F1Q03052 451 aaPredicted RBP13.86□□□□□ -0.19
DDX54-205ENST00000548786 SPOCK1Q08629 439 aa13.86□□□□□ -0.19
DDX54-205ENST00000548786 PIN1Q13526 163 aaPredicted RBP13.86□□□□□ -0.19
DDX54-205ENST00000548786 VTCN1Q7Z7D3 282 aa13.86□□□□□ -0.19
DDX54-205ENST00000548786 UEVLDQ8IX04 471 aa13.86□□□□□ -0.19
DDX54-205ENST00000548786 LRRC17Q8N6Y2 441 aa13.86□□□□□ -0.19
DDX54-205ENST00000548786 RNF148Q8N7C7 305 aa13.86□□□□□ -0.19
DDX54-205ENST00000548786 POMGNT2Q8NAT1 580 aa13.86□□□□□ -0.19
DDX54-205ENST00000548786 TMEM255BQ8WV15 326 aa13.86□□□□□ -0.19
DDX54-205ENST00000548786 HOPXQ9BPY8 73 aaPredicted RBP13.86□□□□□ -0.19
DDX54-205ENST00000548786 KCTD14Q9BQ13 255 aaPredicted RBP13.86□□□□□ -0.19
DDX54-205ENST00000548786 EMC6Q9BV81 110 aa13.86□□□□□ -0.19
DDX54-205ENST00000548786 ALG2Q9H553 416 aa13.86□□□□□ -0.19
DDX54-205ENST00000548786 MS4A18H0YCH9 400 aa13.85□□□□□ -0.19
DDX54-205ENST00000548786 ABCD4O14678 606 aa13.85□□□□□ -0.19
DDX54-205ENST00000548786 HS3ST1O14792 307 aa13.85□□□□□ -0.19
DDX54-205ENST00000548786 TRAF3IP2O43734 574 aaPredicted RBP13.85□□□□□ -0.19
DDX54-205ENST00000548786 UMPSP11172 480 aa13.85□□□□□ -0.19
DDX54-205ENST00000548786 MPGP29372 298 aa13.85□□□□□ -0.19
DDX54-205ENST00000548786 HOXC12P31275 282 aa13.85□□□□□ -0.19
DDX54-205ENST00000548786 MS4A18Q3C1V0 323 aa13.85□□□□□ -0.19
DDX54-205ENST00000548786 OR7E24Q6IFN5 339 aa13.85□□□□□ -0.19
DDX54-205ENST00000548786 C8orf82Q6P1X6 216 aaPredicted RBP13.85□□□□□ -0.19
DDX54-205ENST00000548786 LINC00114Q6XXX2 140 aa13.85□□□□□ -0.19
DDX54-205ENST00000548786 SPNS3Q6ZMD2 512 aa13.85□□□□□ -0.19
DDX54-205ENST00000548786 NKAIN4Q8IVV8 208 aa13.85□□□□□ -0.19
DDX54-205ENST00000548786 WDFY1Q8IWB7 410 aa13.85□□□□□ -0.19
DDX54-205ENST00000548786 PIAS4Q8N2W9 510 aaPredicted RBP13.85□□□□□ -0.19
DDX54-205ENST00000548786 PFN4Q8NHR9 129 aa13.85□□□□□ -0.19
DDX54-205ENST00000548786 MBD6Q96DN6 1003 aa13.85□□□□□ -0.19
DDX54-205ENST00000548786 ALPK1Q96QP1 1244 aa13.85□□□□□ -0.19
DDX54-205ENST00000548786 USB1Q9BQ65 265 aaKnown RBP13.85□□□□□ -0.19
DDX54-205ENST00000548786 TMEM204Q9BSN7 226 aa13.85□□□□□ -0.19
DDX54-205ENST00000548786 PCDHAC1Q9H158 963 aa13.85□□□□□ -0.19
DDX54-205ENST00000548786 MED29Q9NX70 200 aa13.85□□□□□ -0.19
DDX54-205ENST00000548786 ADA2Q9NZK5 511 aa13.85□□□□□ -0.19
DDX54-205ENST00000548786 CORINQ9Y5Q5 1042 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms