RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 IGKV1D-42A0A075B6H8 117 aa15.15■□□□□ 0.02
CHMP1A-205ENST00000548650 ZNF432O94892 652 aa15.15■□□□□ 0.02
CHMP1A-205ENST00000548650 CSF3P09919 207 aa15.15■□□□□ 0.02
CHMP1A-205ENST00000548650 BMP4P12644 408 aa15.15■□□□□ 0.02
CHMP1A-205ENST00000548650 ETS2P15036 469 aa15.15■□□□□ 0.02
CHMP1A-205ENST00000548650 PRKAR1BP31321 381 aa15.15■□□□□ 0.02
CHMP1A-205ENST00000548650 STX1BP61266 288 aa15.15■□□□□ 0.02
CHMP1A-205ENST00000548650 TUBA1BP68363 451 aa15.15■□□□□ 0.02
CHMP1A-205ENST00000548650 TUBA4AP68366 448 aa15.15■□□□□ 0.02
CHMP1A-205ENST00000548650 GCNT6Q5T4J0 391 aa15.15■□□□□ 0.02
CHMP1A-205ENST00000548650 TUBA1AQ71U36 451 aa15.15■□□□□ 0.02
CHMP1A-205ENST00000548650 KDM8Q8N371 416 aa15.15■□□□□ 0.02
CHMP1A-205ENST00000548650 NFKBIDQ8NI38 313 aa15.15■□□□□ 0.02
CHMP1A-205ENST00000548650 MAGEE2Q8TD90 523 aaPredicted RBP15.15■□□□□ 0.02
CHMP1A-205ENST00000548650 SLC25A36Q96CQ1 311 aa15.15■□□□□ 0.02
CHMP1A-205ENST00000548650 ZNF317Q96PQ6 595 aaPredicted RBP15.15■□□□□ 0.02
CHMP1A-205ENST00000548650 EBF4Q9BQW3 602 aa15.15■□□□□ 0.02
CHMP1A-205ENST00000548650 KATNB1Q9BVA0 655 aa15.15■□□□□ 0.02
CHMP1A-205ENST00000548650 SEC61A2Q9H9S3 476 aa15.15■□□□□ 0.02
CHMP1A-205ENST00000548650 C12orf10Q9HB07 376 aa15.15■□□□□ 0.02
CHMP1A-205ENST00000548650 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.15■□□□□ 0.028e-9■■■□□ 16
CHMP1A-205ENST00000548650 TRBV5-3A0A0A0MS03 114 aa15.14■□□□□ 0.01
CHMP1A-205ENST00000548650 A0A1B0GWA3 101 aa15.14■□□□□ 0.01
CHMP1A-205ENST00000548650 C5orf58C9J3I9 102 aa15.14■□□□□ 0.01
CHMP1A-205ENST00000548650 NR5A2O00482 541 aa15.14■□□□□ 0.01
CHMP1A-205ENST00000548650 POLR3GO15318 223 aaPredicted RBP15.14■□□□□ 0.01
CHMP1A-205ENST00000548650 IGLV1-44P01699 117 aa15.14■□□□□ 0.01
CHMP1A-205ENST00000548650 CECR9P0C854 216 aa15.14■□□□□ 0.01
CHMP1A-205ENST00000548650 GTF2E2P29084 291 aaKnown RBP15.14■□□□□ 0.01
CHMP1A-205ENST00000548650 SH3BGRP55822 239 aaPredicted RBP15.14■□□□□ 0.01
CHMP1A-205ENST00000548650 CLDN17P56750 224 aa15.14■□□□□ 0.01
CHMP1A-205ENST00000548650 ROR2Q01974 943 aaKnown RBP15.14■□□□□ 0.01
CHMP1A-205ENST00000548650 DHRS4L2Q6PKH6 230 aa15.14■□□□□ 0.01
CHMP1A-205ENST00000548650 BLOC1S3Q6QNY0 202 aa15.14■□□□□ 0.01
CHMP1A-205ENST00000548650 LSMEM1Q8N8F7 131 aa15.14■□□□□ 0.01
CHMP1A-205ENST00000548650 SPATA3Q8NHX4 192 aa15.14■□□□□ 0.01
CHMP1A-205ENST00000548650 FBXO17Q96EF6 278 aa15.14■□□□□ 0.01
CHMP1A-205ENST00000548650 SORCS2Q96PQ0 1159 aa15.14■□□□□ 0.01
CHMP1A-205ENST00000548650 IKZF5Q9H5V7 419 aa15.14■□□□□ 0.01
CHMP1A-205ENST00000548650 SLCO1B3Q9NPD5 702 aa15.14■□□□□ 0.01
CHMP1A-205ENST00000548650 SLC52A3Q9NQ40 469 aa15.14■□□□□ 0.01
CHMP1A-205ENST00000548650 CA10Q9NS85 328 aa15.14■□□□□ 0.01
CHMP1A-205ENST00000548650 SLAMF8Q9P0V8 285 aa15.14■□□□□ 0.01
CHMP1A-205ENST00000548650 GMEB1Q9Y692 573 aa15.14■□□□□ 0.01
CHMP1A-205ENST00000548650 PMF1-BGLAPU3KQ54 211 aa15.14■□□□□ 0.01
CHMP1A-205ENST00000548650 A0A096LPE4 126 aa15.13■□□□□ 0.01
CHMP1A-205ENST00000548650 A0A1W2PPZ6 126 aa15.13■□□□□ 0.01
CHMP1A-205ENST00000548650 RPL36A-HNRNPH2H7BZ11 118 aa15.13■□□□□ 0.01
CHMP1A-205ENST00000548650 M0R082 166 aa15.13■□□□□ 0.01
CHMP1A-205ENST00000548650 ERLIN1O75477 346 aa15.13■□□□□ 0.01
CHMP1A-205ENST00000548650 ZNF16P17020 682 aaPredicted RBP15.13■□□□□ 0.01
CHMP1A-205ENST00000548650 ZNF43P17038 809 aa15.13■□□□□ 0.01
CHMP1A-205ENST00000548650 IDH3AP50213 366 aa15.13■□□□□ 0.01
CHMP1A-205ENST00000548650 UBE2NP61088 152 aaKnown RBP15.13■□□□□ 0.01
CHMP1A-205ENST00000548650 SNRPD2P62316 118 aaKnown RBP15.13■□□□□ 0.01
CHMP1A-205ENST00000548650 NAAAQ02083 359 aa15.13■□□□□ 0.01
CHMP1A-205ENST00000548650 C3orf36Q3SXR2 165 aa15.13■□□□□ 0.01
CHMP1A-205ENST00000548650 CHRFAM7AQ494W8 412 aa15.13■□□□□ 0.01
CHMP1A-205ENST00000548650 PAGE3Q5JUK9 113 aa15.13■□□□□ 0.01
CHMP1A-205ENST00000548650 FAM69AQ5T7M9 428 aa15.13■□□□□ 0.01
CHMP1A-205ENST00000548650 HMBOX1Q6NT76 420 aa15.13■□□□□ 0.01
CHMP1A-205ENST00000548650 ANKRD16Q6P6B7 361 aa15.13■□□□□ 0.01
CHMP1A-205ENST00000548650 C5orf46Q6UWT4 87 aa15.13■□□□□ 0.01
CHMP1A-205ENST00000548650 MYPOPQ86VE0 399 aaPredicted RBP15.13■□□□□ 0.01
CHMP1A-205ENST00000548650 ANKK1Q8NFD2 765 aa15.13■□□□□ 0.01
CHMP1A-205ENST00000548650 ZNF417Q8TAU3 575 aa15.13■□□□□ 0.01
CHMP1A-205ENST00000548650 SLC38A4Q969I6 547 aa15.13■□□□□ 0.01
CHMP1A-205ENST00000548650 TAAR8Q969N4 342 aa15.13■□□□□ 0.01
CHMP1A-205ENST00000548650 SPDL1Q96EA4 605 aa15.13■□□□□ 0.01
CHMP1A-205ENST00000548650 ZNF587Q96SQ5 575 aaPredicted RBP15.13■□□□□ 0.01
CHMP1A-205ENST00000548650 VAPAQ9P0L0 249 aa15.13■□□□□ 0.01
CHMP1A-205ENST00000548650 KLHL14Q9P2G3 628 aa15.13■□□□□ 0.01
CHMP1A-205ENST00000548650 RPS6KB2Q9UBS0 482 aa15.13■□□□□ 0.01
CHMP1A-205ENST00000548650 ZNF503-AS2A6NEH8 195 aa15.12■□□□□ 0.01
CHMP1A-205ENST00000548650 VWC2LB2RUY7 222 aa15.12■□□□□ 0.01
CHMP1A-205ENST00000548650 AIM2O14862 343 aa15.12■□□□□ 0.01
CHMP1A-205ENST00000548650 TRAF3IP2O43734 574 aaPredicted RBP15.12■□□□□ 0.01
CHMP1A-205ENST00000548650 TPST1O60507 370 aa15.12■□□□□ 0.01
CHMP1A-205ENST00000548650 PDE5AO76074 875 aa15.12■□□□□ 0.01
CHMP1A-205ENST00000548650 TGDSO95455 350 aa15.12■□□□□ 0.01
CHMP1A-205ENST00000548650 F12P00748 615 aaPredicted RBP15.12■□□□□ 0.01
CHMP1A-205ENST00000548650 IGKV3-15P01624 115 aa15.12■□□□□ 0.01
CHMP1A-205ENST00000548650 CRYAAP02489 173 aa15.12■□□□□ 0.01
CHMP1A-205ENST00000548650 IGHV4-31P0DP07 118 aa15.12■□□□□ 0.01
CHMP1A-205ENST00000548650 PAX7P23759 505 aa15.12■□□□□ 0.01
CHMP1A-205ENST00000548650 GRPRP30550 384 aa15.12■□□□□ 0.01
CHMP1A-205ENST00000548650 CALCRP30988 508 aa15.12■□□□□ 0.01
CHMP1A-205ENST00000548650 CDK6Q00534 326 aa15.12■□□□□ 0.01
CHMP1A-205ENST00000548650 GLIPR1L2Q4G1C9 344 aa15.12■□□□□ 0.01
CHMP1A-205ENST00000548650 AGBL2Q5U5Z8 902 aa15.12■□□□□ 0.01
CHMP1A-205ENST00000548650 TMEM123Q8N131 208 aa15.12■□□□□ 0.01
CHMP1A-205ENST00000548650 FAM169BQ8N8A8 192 aa15.12■□□□□ 0.01
CHMP1A-205ENST00000548650 ADPRHL1Q8NDY3 354 aa15.12■□□□□ 0.01
CHMP1A-205ENST00000548650 PROX1Q92786 737 aa15.12■□□□□ 0.01
CHMP1A-205ENST00000548650 OXGR1Q96P68 337 aa15.12■□□□□ 0.01
CHMP1A-205ENST00000548650 KCNS3Q9BQ31 491 aa15.12■□□□□ 0.01
CHMP1A-205ENST00000548650 CCDC167Q9P0B6 97 aa15.12■□□□□ 0.01
CHMP1A-205ENST00000548650 TESQ9UGI8 421 aaKnown RBP15.12■□□□□ 0.01
CHMP1A-205ENST00000548650 FKBP7Q9Y680 259 aa15.12■□□□□ 0.01
CHMP1A-205ENST00000548650 TRAV36DV7A0A075B6V5 113 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms