RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 GPRIN2O60269 458 aa5.86□□□□□ -1.47
SCAF11-211ENST00000547950 TPST1O60507 370 aa5.86□□□□□ -1.47
SCAF11-211ENST00000547950 NPIPB7O75200 414 aa5.86□□□□□ -1.47
SCAF11-211ENST00000547950 UPK3AO75631 287 aa5.86□□□□□ -1.47
SCAF11-211ENST00000547950 VAMP5O95183 116 aa5.86□□□□□ -1.47
SCAF11-211ENST00000547950 TGDSO95455 350 aa5.86□□□□□ -1.47
SCAF11-211ENST00000547950 WNT11O96014 354 aa5.86□□□□□ -1.47
SCAF11-211ENST00000547950 ETS2P15036 469 aa5.86□□□□□ -1.47
SCAF11-211ENST00000547950 GTF2E2P29084 291 aaKnown RBP5.86□□□□□ -1.47
SCAF11-211ENST00000547950 AQP1P29972 269 aa5.86□□□□□ -1.47
SCAF11-211ENST00000547950 P2RY4P51582 365 aa5.86□□□□□ -1.47
SCAF11-211ENST00000547950 CLDN17P56750 224 aa5.86□□□□□ -1.47
SCAF11-211ENST00000547950 UBE2NP61088 152 aaKnown RBP5.86□□□□□ -1.47
SCAF11-211ENST00000547950 TUBA1BP68363 451 aa5.86□□□□□ -1.47
SCAF11-211ENST00000547950 TUBA4AP68366 448 aa5.86□□□□□ -1.47
SCAF11-211ENST00000547950 CDK6Q00534 326 aa5.86□□□□□ -1.47
SCAF11-211ENST00000547950 CHRNB3Q05901 458 aa5.86□□□□□ -1.47
SCAF11-211ENST00000547950 DMTNQ08495 405 aa5.86□□□□□ -1.47
SCAF11-211ENST00000547950 FADDQ13158 208 aa5.86□□□□□ -1.47
SCAF11-211ENST00000547950 C1DQ13901 141 aaKnown RBP5.86□□□□□ -1.47
SCAF11-211ENST00000547950 NRF1Q16656 503 aa5.86□□□□□ -1.47
SCAF11-211ENST00000547950 PAGE3Q5JUK9 113 aa5.86□□□□□ -1.47
SCAF11-211ENST00000547950 GCNT6Q5T4J0 391 aa5.86□□□□□ -1.47
SCAF11-211ENST00000547950 AGBL2Q5U5Z8 902 aa5.86□□□□□ -1.47
SCAF11-211ENST00000547950 HMBOX1Q6NT76 420 aa5.86□□□□□ -1.47
SCAF11-211ENST00000547950 REEP3Q6NUK4 255 aa5.86□□□□□ -1.47
SCAF11-211ENST00000547950 TUBA1AQ71U36 451 aa5.86□□□□□ -1.47
SCAF11-211ENST00000547950 ABHD12BQ7Z5M8 362 aaPredicted RBP5.86□□□□□ -1.47
SCAF11-211ENST00000547950 EPHX4Q8IUS5 362 aa5.86□□□□□ -1.47
SCAF11-211ENST00000547950 FUNDC1Q8IVP5 155 aa5.86□□□□□ -1.47
SCAF11-211ENST00000547950 MSRB3Q8IXL7 192 aa5.86□□□□□ -1.47
SCAF11-211ENST00000547950 C17orf78Q8N4C9 275 aa5.86□□□□□ -1.47
SCAF11-211ENST00000547950 C1orf162Q8NEQ5 155 aaPredicted RBP5.86□□□□□ -1.47
SCAF11-211ENST00000547950 MFSD8Q8NHS3 518 aa5.86□□□□□ -1.47
SCAF11-211ENST00000547950 BBS10Q8TAM1 723 aa5.86□□□□□ -1.47
SCAF11-211ENST00000547950 STK35Q8TDR2 534 aa5.86□□□□□ -1.47
SCAF11-211ENST00000547950 DYDC1Q8WWB3 177 aa5.86□□□□□ -1.47
SCAF11-211ENST00000547950 FBXO17Q96EF6 278 aa5.86□□□□□ -1.47
SCAF11-211ENST00000547950 THOC1Q96FV9 657 aaKnown RBP5.86□□□□□ -1.47
SCAF11-211ENST00000547950 C7orf26Q96N11 449 aa5.86□□□□□ -1.47
SCAF11-211ENST00000547950 KCNS3Q9BQ31 491 aa5.86□□□□□ -1.47
SCAF11-211ENST00000547950 CCDC28BQ9BUN5 200 aa5.86□□□□□ -1.47
SCAF11-211ENST00000547950 RSPO3Q9BXY4 272 aaPredicted RBP5.86□□□□□ -1.47
SCAF11-211ENST00000547950 BCL2L10Q9HD36 194 aa5.86□□□□□ -1.47
SCAF11-211ENST00000547950 SLC25A37Q9NYZ2 338 aa5.86□□□□□ -1.47
SCAF11-211ENST00000547950 VAPAQ9P0L0 249 aa5.86□□□□□ -1.47
SCAF11-211ENST00000547950 SEC14L4Q9UDX3 406 aa5.86□□□□□ -1.47
SCAF11-211ENST00000547950 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.86□□□□□ -1.47
SCAF11-211ENST00000547950 ADAM21Q9UKJ8 722 aa5.86□□□□□ -1.47
SCAF11-211ENST00000547950 PRDM4Q9UKN5 801 aa5.86□□□□□ -1.47
SCAF11-211ENST00000547950 RASD1Q9Y272 281 aa5.86□□□□□ -1.47
SCAF11-211ENST00000547950 PMF1-BGLAPU3KQ54 211 aa5.86□□□□□ -1.47
SCAF11-211ENST00000547950 ZNF469Q96JG9 3925 aaPredicted RBP5.86□□□□□ -1.47
SCAF11-211ENST00000547950 VPS13CQ709C8 3753 aa5.85□□□□□ -1.47
SCAF11-211ENST00000547950 ROS1P08922 2347 aa5.85□□□□□ -1.47
SCAF11-211ENST00000547950 IGHV1-18A0A0C4DH31 117 aa5.85□□□□□ -1.47
SCAF11-211ENST00000547950 A0A1B0GWA3 101 aa5.85□□□□□ -1.47
SCAF11-211ENST00000547950 EVPLLA8MZ36 301 aa5.85□□□□□ -1.47
SCAF11-211ENST00000547950 FTCDNL1E5RQL4 147 aa5.85□□□□□ -1.47
SCAF11-211ENST00000547950 ATP6V1G2-DDX39BF2Z307 99 aa5.85□□□□□ -1.47
SCAF11-211ENST00000547950 OR2T1O43869 369 aa5.85□□□□□ -1.47
SCAF11-211ENST00000547950 SLC43A1O75387 559 aa5.85□□□□□ -1.47
SCAF11-211ENST00000547950 CRLF1O75462 422 aa5.85□□□□□ -1.47
SCAF11-211ENST00000547950 LY6HO94772 140 aa5.85□□□□□ -1.47
SCAF11-211ENST00000547950 PNMTP11086 282 aa5.85□□□□□ -1.47
SCAF11-211ENST00000547950 ZNF43P17038 809 aa5.85□□□□□ -1.47
SCAF11-211ENST00000547950 PPIBP23284 216 aaKnown RBP5.85□□□□□ -1.47
SCAF11-211ENST00000547950 SLC6A2P23975 617 aa5.85□□□□□ -1.47
SCAF11-211ENST00000547950 APOBEC3AP31941 199 aaPredicted RBP5.85□□□□□ -1.47
SCAF11-211ENST00000547950 DSCR9P59020 149 aa5.85□□□□□ -1.47
SCAF11-211ENST00000547950 ARF1P84077 181 aaKnown RBP5.85□□□□□ -1.47
SCAF11-211ENST00000547950 ROR2Q01974 943 aaKnown RBP5.85□□□□□ -1.47
SCAF11-211ENST00000547950 EGR4Q05215 589 aa5.85□□□□□ -1.47
SCAF11-211ENST00000547950 KRTAP1-1Q07627 177 aa5.85□□□□□ -1.47
SCAF11-211ENST00000547950 TBRG1Q3YBR2 411 aa5.85□□□□□ -1.47
SCAF11-211ENST00000547950 GLIPR1L2Q4G1C9 344 aa5.85□□□□□ -1.47
SCAF11-211ENST00000547950 ALG10BQ5I7T1 473 aa5.85□□□□□ -1.47
SCAF11-211ENST00000547950 LRIF1Q5T3J3 769 aa5.85□□□□□ -1.47
SCAF11-211ENST00000547950 C11orf71Q6IPW1 123 aa5.85□□□□□ -1.47
SCAF11-211ENST00000547950 ZNF544Q6NX49 715 aa5.85□□□□□ -1.47
SCAF11-211ENST00000547950 ANKRD16Q6P6B7 361 aa5.85□□□□□ -1.47
SCAF11-211ENST00000547950 VHLLQ6RSH7 139 aa5.85□□□□□ -1.47
SCAF11-211ENST00000547950 CLEC2AQ6UVW9 174 aa5.85□□□□□ -1.47
SCAF11-211ENST00000547950 DNM1P46Q6ZS02 220 aa5.85□□□□□ -1.47
SCAF11-211ENST00000547950 H1FNTQ75WM6 255 aaPredicted RBP5.85□□□□□ -1.47
SCAF11-211ENST00000547950 LINGO2Q7L985 606 aa5.85□□□□□ -1.47
SCAF11-211ENST00000547950 COMTD1Q86VU5 262 aa5.85□□□□□ -1.47
SCAF11-211ENST00000547950 KRT73Q86Y46 540 aa5.85□□□□□ -1.47
SCAF11-211ENST00000547950 C10orf111Q8N326 155 aa5.85□□□□□ -1.47
SCAF11-211ENST00000547950 GPR137CQ8N3F9 429 aa5.85□□□□□ -1.47
SCAF11-211ENST00000547950 C10orf53Q8N6V4 93 aa5.85□□□□□ -1.47
SCAF11-211ENST00000547950 ZNF525Q8N782 197 aa5.85□□□□□ -1.47
SCAF11-211ENST00000547950 OR1K1Q8NGR3 316 aa5.85□□□□□ -1.47
SCAF11-211ENST00000547950 BCL2L2Q92843 193 aaPredicted RBP5.85□□□□□ -1.47
SCAF11-211ENST00000547950 TAAR8Q969N4 342 aa5.85□□□□□ -1.47
SCAF11-211ENST00000547950 ATP6V1G3Q96LB4 118 aa5.85□□□□□ -1.47
SCAF11-211ENST00000547950 OXGR1Q96P68 337 aa5.85□□□□□ -1.47
SCAF11-211ENST00000547950 ALKBH3Q96Q83 286 aaPredicted RBP5.85□□□□□ -1.47
SCAF11-211ENST00000547950 PTDSS2Q9BVG9 487 aa5.85□□□□□ -1.47
SCAF11-211ENST00000547950 SPATA5L1Q9BVQ7 753 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms