RNA–Protein interactions for RNA: ENST00000547394.6

CUX1-212, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-212ENST00000547394 QPRTQ15274 297 aa10.07□□□□□ -0.8
CUX1-212ENST00000547394 NR0B2Q15466 257 aa10.07□□□□□ -0.8
CUX1-212ENST00000547394 ETFDHQ16134 617 aa10.07□□□□□ -0.8
CUX1-212ENST00000547394 ARMC4Q5T2S8 1044 aa10.07□□□□□ -0.8
CUX1-212ENST00000547394 ARSKQ6UWY0 536 aa10.07□□□□□ -0.8
CUX1-212ENST00000547394 PRSS42Q7Z5A4 293 aa10.07□□□□□ -0.8
CUX1-212ENST00000547394 JAZF1Q86VZ6 243 aa10.07□□□□□ -0.8
CUX1-212ENST00000547394 APCDD1LQ8NCL9 501 aa10.07□□□□□ -0.8
CUX1-212ENST00000547394 ABHD4Q8TB40 342 aa10.07□□□□□ -0.8
CUX1-212ENST00000547394 MVB12AQ96EY5 273 aa10.07□□□□□ -0.8
CUX1-212ENST00000547394 PGLYRP3Q96LB9 341 aa10.07□□□□□ -0.8
CUX1-212ENST00000547394 TSPAN32Q96QS1 320 aa10.07□□□□□ -0.8
CUX1-212ENST00000547394 OR14A2Q96R54 314 aa10.07□□□□□ -0.8
CUX1-212ENST00000547394 SLC25A18Q9H1K4 315 aa10.07□□□□□ -0.8
CUX1-212ENST00000547394 WDR76Q9H967 626 aa10.07□□□□□ -0.8
CUX1-212ENST00000547394 IQCMA0A1B0GVH7 501 aa10.06□□□□□ -0.8
CUX1-212ENST00000547394 ACOD1A6NK06 481 aa10.06□□□□□ -0.8
CUX1-212ENST00000547394 TTC36A6NLP5 189 aa10.06□□□□□ -0.8
CUX1-212ENST00000547394 FAM25AB3EWG3 89 aa10.06□□□□□ -0.8
CUX1-212ENST00000547394 FAM25CB3EWG5 89 aa10.06□□□□□ -0.8
CUX1-212ENST00000547394 FAM25GB3EWG6 89 aa10.06□□□□□ -0.8
CUX1-212ENST00000547394 CSF3P09919 207 aa10.06□□□□□ -0.8
CUX1-212ENST00000547394 SNTA1Q13424 505 aa10.06□□□□□ -0.8
CUX1-212ENST00000547394 ACSM3Q53FZ2 586 aa10.06□□□□□ -0.8
CUX1-212ENST00000547394 MESTQ5EB52 335 aa10.06□□□□□ -0.8
CUX1-212ENST00000547394 PAPD4Q6PIY7 484 aaKnown RBP10.06□□□□□ -0.8
CUX1-212ENST00000547394 DPY19L2P2Q6ZN68 376 aa10.06□□□□□ -0.8
CUX1-212ENST00000547394 PM20D2Q8IYS1 436 aa10.06□□□□□ -0.8
CUX1-212ENST00000547394 OR14A16Q8NHC5 309 aa10.06□□□□□ -0.8
CUX1-212ENST00000547394 ALG12Q9BV10 488 aa10.06□□□□□ -0.8
CUX1-212ENST00000547394 TSPAN10Q9H1Z9 355 aaPredicted RBP10.06□□□□□ -0.8
CUX1-212ENST00000547394 RASD1Q9Y272 281 aa10.06□□□□□ -0.8
CUX1-212ENST00000547394 H3BML4 177 aa10.06□□□□□ -0.8
CUX1-212ENST00000547394 IFI6P09912 130 aa10.06□□□□□ -0.8
CUX1-212ENST00000547394 FREM3P0C091 2139 aa10.06□□□□□ -0.8
CUX1-212ENST00000547394 HLA-DOBP13765 273 aa10.06□□□□□ -0.8
CUX1-212ENST00000547394 EDNRAP25101 427 aa10.06□□□□□ -0.8
CUX1-212ENST00000547394 FGF9P31371 208 aaPredicted RBP10.06□□□□□ -0.8
CUX1-212ENST00000547394 RFX2P48378 723 aa10.06□□□□□ -0.8
CUX1-212ENST00000547394 RPS4XP62701 263 aaKnown RBP10.06□□□□□ -0.8
CUX1-212ENST00000547394 C19orf57Q0VDD7 668 aa10.06□□□□□ -0.8
CUX1-212ENST00000547394 COL28A1Q2UY09 1125 aa10.06□□□□□ -0.8
CUX1-212ENST00000547394 RHBDD2Q6NTF9 364 aa10.06□□□□□ -0.8
CUX1-212ENST00000547394 TUBA3EQ6PEY2 450 aa10.06□□□□□ -0.8
CUX1-212ENST00000547394 ANKRD37Q7Z713 158 aa10.06□□□□□ -0.8
CUX1-212ENST00000547394 RDH10Q8IZV5 341 aa10.06□□□□□ -0.8
CUX1-212ENST00000547394 OR6V1Q8N148 313 aa10.06□□□□□ -0.8
CUX1-212ENST00000547394 OR4D9Q8NGE8 314 aa10.06□□□□□ -0.8
CUX1-212ENST00000547394 IFI44Q8TCB0 444 aa10.06□□□□□ -0.8
CUX1-212ENST00000547394 EDAQ92838 391 aa10.06□□□□□ -0.8
CUX1-212ENST00000547394 CHRNA10Q9GZZ6 450 aa10.06□□□□□ -0.8
CUX1-212ENST00000547394 NCDNQ9UBB6 729 aa10.06□□□□□ -0.8
CUX1-212ENST00000547394 GRHPRQ9UBQ7 328 aa10.06□□□□□ -0.8
CUX1-212ENST00000547394 RARRES3Q9UL19 164 aa10.06□□□□□ -0.8
CUX1-212ENST00000547394 FAM186AA6NE01 2351 aa10.06□□□□□ -0.8
CUX1-212ENST00000547394 SNPHO15079 494 aa10.05□□□□□ -0.8
CUX1-212ENST00000547394 SUSD5O60279 629 aa10.05□□□□□ -0.8
CUX1-212ENST00000547394 ELK1P19419 428 aa10.05□□□□□ -0.8
CUX1-212ENST00000547394 NANOS3P60323 173 aaKnown RBP10.05□□□□□ -0.8
CUX1-212ENST00000547394 MEP1BQ16820 701 aa10.05□□□□□ -0.8
CUX1-212ENST00000547394 GLYR1Q49A26 553 aaPredicted RBP10.05□□□□□ -0.8
CUX1-212ENST00000547394 TRIM61Q5EBN2 209 aa10.05□□□□□ -0.8
CUX1-212ENST00000547394 SLC6A19Q695T7 634 aa10.05□□□□□ -0.8
CUX1-212ENST00000547394 SLC35D2Q76EJ3 337 aa10.05□□□□□ -0.8
CUX1-212ENST00000547394 WDFY1Q8IWB7 410 aa10.05□□□□□ -0.8
CUX1-212ENST00000547394 MAML2Q8IZL2 1156 aaPredicted RBP10.05□□□□□ -0.8
CUX1-212ENST00000547394 ARL5BQ96KC2 179 aa10.05□□□□□ -0.8
CUX1-212ENST00000547394 AK6Q9Y3D8 172 aaKnown RBP10.05□□□□□ -0.8
CUX1-212ENST00000547394 TRBV2A0A0J9YWF9 115 aa10.05□□□□□ -0.8
CUX1-212ENST00000547394 PMS2P1A4D2B8 440 aa10.05□□□□□ -0.8
CUX1-212ENST00000547394 LAMTOR5O43504 91 aa10.05□□□□□ -0.8
CUX1-212ENST00000547394 PPM1BO75688 479 aa10.05□□□□□ -0.8
CUX1-212ENST00000547394 HLA-DQA2P01906 255 aa10.05□□□□□ -0.8
CUX1-212ENST00000547394 CD14P08571 375 aa10.05□□□□□ -0.8
CUX1-212ENST00000547394 ASAH2BP0C7U1 165 aa10.05□□□□□ -0.8
CUX1-212ENST00000547394 ETV6P41212 452 aa10.05□□□□□ -0.8
CUX1-212ENST00000547394 DIO1P49895 249 aa10.05□□□□□ -0.8
CUX1-212ENST00000547394 GDI2P50395 445 aaKnown RBP10.05□□□□□ -0.8
CUX1-212ENST00000547394 LINC01590Q5TEZ4 76 aa10.05□□□□□ -0.8
CUX1-212ENST00000547394 FAM122BQ7Z309 247 aa10.05□□□□□ -0.8
CUX1-212ENST00000547394 SAMD12Q8N8I0 201 aa10.05□□□□□ -0.8
CUX1-212ENST00000547394 OR8K3Q8NH51 312 aa10.05□□□□□ -0.8
CUX1-212ENST00000547394 THAP4Q8WY91 577 aa10.05□□□□□ -0.8
CUX1-212ENST00000547394 TMCO6Q96DC7 493 aa10.05□□□□□ -0.8
CUX1-212ENST00000547394 AMELYQ99218 206 aa10.05□□□□□ -0.8
CUX1-212ENST00000547394 DDOQ99489 341 aa10.05□□□□□ -0.8
CUX1-212ENST00000547394 CRB3Q9BUF7 120 aa10.05□□□□□ -0.8
CUX1-212ENST00000547394 ULBP3Q9BZM4 244 aa10.05□□□□□ -0.8
CUX1-212ENST00000547394 FKRPQ9H9S5 495 aa10.05□□□□□ -0.8
CUX1-212ENST00000547394 SUSD2Q9UGT4 822 aa10.05□□□□□ -0.8
CUX1-212ENST00000547394 ST6GALNAC2Q9UJ37 374 aa10.05□□□□□ -0.8
CUX1-212ENST00000547394 NPFFR2Q9Y5X5 522 aa10.05□□□□□ -0.8
CUX1-212ENST00000547394 A0A0G2JMP0 313 aa10.04□□□□□ -0.8
CUX1-212ENST00000547394 A0A0X1KG70 313 aa10.04□□□□□ -0.8
CUX1-212ENST00000547394 G3V3Y1 287 aa10.04□□□□□ -0.8
CUX1-212ENST00000547394 SLC25A12O75746 678 aa10.04□□□□□ -0.8
CUX1-212ENST00000547394 HIST1H2ABP04908 130 aa10.04□□□□□ -0.8
CUX1-212ENST00000547394 PNMTP11086 282 aa10.04□□□□□ -0.8
CUX1-212ENST00000547394 SOX2P48431 317 aa10.04□□□□□ -0.8
CUX1-212ENST00000547394 TMED10P49755 219 aaKnown RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms