RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 OR5J2Q8NH18 312 aa12.83□□□□□ -0.36
DDX54-203ENST00000546869 ACOT11Q8WXI4 607 aaPredicted RBP12.83□□□□□ -0.36
DDX54-203ENST00000546869 CLPTM1LQ96KA5 538 aa12.83□□□□□ -0.36
DDX54-203ENST00000546869 ZNF347Q96SE7 839 aa12.83□□□□□ -0.36
DDX54-203ENST00000546869 PIP5K1AQ99755 562 aa12.83□□□□□ -0.36
DDX54-203ENST00000546869 USB1Q9BQ65 265 aaKnown RBP12.83□□□□□ -0.36
DDX54-203ENST00000546869 HDHD5Q9BXW7 423 aa12.83□□□□□ -0.36
DDX54-203ENST00000546869 CADM1Q9BY67 442 aaKnown RBP12.83□□□□□ -0.36
DDX54-203ENST00000546869 NANSQ9NR45 359 aa12.83□□□□□ -0.36
DDX54-203ENST00000546869 B3GAT1Q9P2W7 334 aa12.83□□□□□ -0.36
DDX54-203ENST00000546869 KCNN3Q9UGI6 736 aa12.83□□□□□ -0.36
DDX54-203ENST00000546869 HECTD1Q9ULT8 2610 aa12.82□□□□□ -0.36
DDX54-203ENST00000546869 A0A087WUU8 490 aa12.82□□□□□ -0.36
DDX54-203ENST00000546869 OR6C65A6NJZ3 312 aa12.82□□□□□ -0.36
DDX54-203ENST00000546869 C16orf97H3BN30 126 aa12.82□□□□□ -0.36
DDX54-203ENST00000546869 CH25HO95992 272 aa12.82□□□□□ -0.36
DDX54-203ENST00000546869 FABP3P05413 133 aa12.82□□□□□ -0.36
DDX54-203ENST00000546869 H1F0P07305 194 aaKnown RBP12.82□□□□□ -0.36
DDX54-203ENST00000546869 UMPSP11172 480 aa12.82□□□□□ -0.36
DDX54-203ENST00000546869 POU2F1P14859 743 aa12.82□□□□□ -0.36
DDX54-203ENST00000546869 ZNF43P17038 809 aa12.82□□□□□ -0.36
DDX54-203ENST00000546869 PSMB1P20618 241 aaKnown RBP12.82□□□□□ -0.36
DDX54-203ENST00000546869 PRKCDQ05655 676 aa12.82□□□□□ -0.36
DDX54-203ENST00000546869 PUDPQ08623 228 aa12.82□□□□□ -0.36
DDX54-203ENST00000546869 FAM27E3Q08E93 113 aa12.82□□□□□ -0.36
DDX54-203ENST00000546869 PMS2P3Q13401 168 aa12.82□□□□□ -0.36
DDX54-203ENST00000546869 ANKDD1AQ495B1 522 aa12.82□□□□□ -0.36
DDX54-203ENST00000546869 FBXW9Q5XUX1 488 aa12.82□□□□□ -0.36
DDX54-203ENST00000546869 MEX3BQ6ZN04 569 aaKnown RBP12.82□□□□□ -0.36
DDX54-203ENST00000546869 MBOAT2Q6ZWT7 520 aa12.82□□□□□ -0.36
DDX54-203ENST00000546869 SLC46A3Q7Z3Q1 461 aa12.82□□□□□ -0.36
DDX54-203ENST00000546869 GPAT4Q86UL3 456 aa12.82□□□□□ -0.36
DDX54-203ENST00000546869 LSRQ86X29 649 aaPredicted RBP12.82□□□□□ -0.36
DDX54-203ENST00000546869 ZNF100Q8IYN0 542 aa12.82□□□□□ -0.36
DDX54-203ENST00000546869 C10orf53Q8N6V4 93 aa12.82□□□□□ -0.36
DDX54-203ENST00000546869 APH1AQ96BI3 265 aa12.82□□□□□ -0.36
DDX54-203ENST00000546869 ZNF775Q96BV0 537 aaPredicted RBP12.82□□□□□ -0.36
DDX54-203ENST00000546869 SGTBQ96EQ0 304 aa12.82□□□□□ -0.36
DDX54-203ENST00000546869 ZNF385AQ96PM9 386 aaKnown RBP12.82□□□□□ -0.36
DDX54-203ENST00000546869 TRIM15Q9C019 465 aa12.82□□□□□ -0.36
DDX54-203ENST00000546869 LRMDAQ9H2I8 198 aa12.82□□□□□ -0.36
DDX54-203ENST00000546869 C12orf49Q9H741 205 aa12.82□□□□□ -0.36
DDX54-203ENST00000546869 C6orf203Q9P0P8 240 aaPredicted RBP12.82□□□□□ -0.36
DDX54-203ENST00000546869 RHCGQ9UBD6 479 aa12.82□□□□□ -0.36
DDX54-203ENST00000546869 RCE1Q9Y256 329 aa12.82□□□□□ -0.36
DDX54-203ENST00000546869 GPR52Q9Y2T5 361 aa12.82□□□□□ -0.36
DDX54-203ENST00000546869 HCFC1P51610 2035 aa12.82□□□□□ -0.36
DDX54-203ENST00000546869 CACNA1CQ13936 2221 aa12.82□□□□□ -0.36
DDX54-203ENST00000546869 ENO4A6NNW6 628 aa12.81□□□□□ -0.36
DDX54-203ENST00000546869 LRRN3E7EW58 273 aa12.81□□□□□ -0.36
DDX54-203ENST00000546869 hCG_2039718K7EN88 272 aa12.81□□□□□ -0.36
DDX54-203ENST00000546869 OR7A10O76100 309 aa12.81□□□□□ -0.36
DDX54-203ENST00000546869 HIST1H2ABP04908 130 aa12.81□□□□□ -0.36
DDX54-203ENST00000546869 PPP3CBP16298 524 aa12.81□□□□□ -0.36
DDX54-203ENST00000546869 FUT1P19526 365 aa12.81□□□□□ -0.36
DDX54-203ENST00000546869 FUT4P22083 530 aa12.81□□□□□ -0.36
DDX54-203ENST00000546869 UGT2B10P36537 528 aa12.81□□□□□ -0.36
DDX54-203ENST00000546869 HMGA2P52926 109 aa12.81□□□□□ -0.36
DDX54-203ENST00000546869 STAC2Q6ZMT1 411 aa12.81□□□□□ -0.36
DDX54-203ENST00000546869 HIST3H2AQ7L7L0 130 aa12.81□□□□□ -0.36
DDX54-203ENST00000546869 ZDHHC21Q8IVQ6 265 aa12.81□□□□□ -0.36
DDX54-203ENST00000546869 ANKK1Q8NFD2 765 aa12.81□□□□□ -0.36
DDX54-203ENST00000546869 PFN4Q8NHR9 129 aa12.81□□□□□ -0.36
DDX54-203ENST00000546869 SLC7A13Q8TCU3 470 aa12.81□□□□□ -0.36
DDX54-203ENST00000546869 FAM222BQ8WU58 562 aa12.81□□□□□ -0.36
DDX54-203ENST00000546869 HIST1H2ACQ93077 130 aa12.81□□□□□ -0.36
DDX54-203ENST00000546869 BPIFA2Q96DR5 249 aa12.81□□□□□ -0.36
DDX54-203ENST00000546869 C14orf79Q96F83 325 aa12.81□□□□□ -0.36
DDX54-203ENST00000546869 LRGUKQ96M69 825 aa12.81□□□□□ -0.36
DDX54-203ENST00000546869 DACH2Q96NX9 599 aa12.81□□□□□ -0.36
DDX54-203ENST00000546869 FUZQ9BT04 418 aa12.81□□□□□ -0.36
DDX54-203ENST00000546869 C20orf141Q9NUB4 165 aa12.81□□□□□ -0.36
DDX54-203ENST00000546869 TAS2R5Q9NYW4 299 aa12.81□□□□□ -0.36
DDX54-203ENST00000546869 SEC14L4Q9UDX3 406 aa12.81□□□□□ -0.36
DDX54-203ENST00000546869 MALT1Q9UDY8 824 aa12.81□□□□□ -0.36
DDX54-203ENST00000546869 NOX1Q9Y5S8 564 aa12.81□□□□□ -0.36
DDX54-203ENST00000546869 UTP20O75691 2785 aaKnown RBP12.81□□□□□ -0.36
DDX54-203ENST00000546869 FLNBO75369 2602 aaKnown RBP12.8□□□□□ -0.36
DDX54-203ENST00000546869 TUBAL3A6NHL2 446 aa12.8□□□□□ -0.36
DDX54-203ENST00000546869 EBAG9O00559 213 aa12.8□□□□□ -0.36
DDX54-203ENST00000546869 KPNA4O00629 521 aaPredicted RBP12.8□□□□□ -0.36
DDX54-203ENST00000546869 KRT36O76013 467 aa12.8□□□□□ -0.36
DDX54-203ENST00000546869 ZNF432O94892 652 aa12.8□□□□□ -0.36
DDX54-203ENST00000546869 GOSR1O95249 250 aa12.8□□□□□ -0.36
DDX54-203ENST00000546869 NQO1P15559 274 aaKnown RBP12.8□□□□□ -0.36
DDX54-203ENST00000546869 CBLP22681 906 aa12.8□□□□□ -0.36
DDX54-203ENST00000546869 KIR2DL3P43628 341 aa12.8□□□□□ -0.36
DDX54-203ENST00000546869 CBX1P83916 185 aa12.8□□□□□ -0.36
DDX54-203ENST00000546869 CHRNB3Q05901 458 aa12.8□□□□□ -0.36
DDX54-203ENST00000546869 ITGADQ13349 1161 aa12.8□□□□□ -0.36
DDX54-203ENST00000546869 DAZAP2Q15038 168 aaPredicted RBP12.8□□□□□ -0.36
DDX54-203ENST00000546869 FAM98BQ52LJ0 330 aaKnown RBP12.8□□□□□ -0.36
DDX54-203ENST00000546869 SFRP5Q5T4F7 317 aa12.8□□□□□ -0.36
DDX54-203ENST00000546869 C1QTNF12Q5T7M4 302 aa12.8□□□□□ -0.36
DDX54-203ENST00000546869 TMPRSS11FQ6ZWK6 438 aa12.8□□□□□ -0.36
DDX54-203ENST00000546869 ASRGL1Q7L266 308 aa12.8□□□□□ -0.36
DDX54-203ENST00000546869 AAED1Q7RTV5 226 aa12.8□□□□□ -0.36
DDX54-203ENST00000546869 UEVLDQ8IX04 471 aa12.8□□□□□ -0.36
DDX54-203ENST00000546869 CDK20Q8IZL9 346 aa12.8□□□□□ -0.36
DDX54-203ENST00000546869 POMGNT2Q8NAT1 580 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms