RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 ZNF426Q9BUY5 554 aa5.67□□□□□ -1.5
PRKDC-211ENST00000546304 AMBRA1Q9C0C7 1298 aa5.67□□□□□ -1.5
PRKDC-211ENST00000546304 MAGIXQ9H6Y5 334 aa5.67□□□□□ -1.5
PRKDC-211ENST00000546304 MAN2C1Q9NTJ4 1040 aa5.67□□□□□ -1.5
PRKDC-211ENST00000546304 NDUFAF4Q9P032 175 aa5.67□□□□□ -1.5
PRKDC-211ENST00000546304 CLCF1Q9UBD9 225 aa5.67□□□□□ -1.5
PRKDC-211ENST00000546304 SLC7A7Q9UM01 511 aa5.67□□□□□ -1.5
PRKDC-211ENST00000546304 A4GNTQ9UNA3 340 aa5.67□□□□□ -1.5
PRKDC-211ENST00000546304 OSGIN2Q9Y236 505 aa5.67□□□□□ -1.5
PRKDC-211ENST00000546304 FAM215AQ9Y5M1 114 aa5.67□□□□□ -1.5
PRKDC-211ENST00000546304 ENPP4Q9Y6X5 453 aa5.67□□□□□ -1.5
PRKDC-211ENST00000546304 X6R8D5 127 aa5.67□□□□□ -1.5
PRKDC-211ENST00000546304 UTP20O75691 2785 aaKnown RBP5.67□□□□□ -1.5
PRKDC-211ENST00000546304 CENPEQ02224 2701 aa5.66□□□□□ -1.5
PRKDC-211ENST00000546304 A0A087WUJ7 227 aa5.66□□□□□ -1.5
PRKDC-211ENST00000546304 A0A0J9YW62 118 aa5.66□□□□□ -1.5
PRKDC-211ENST00000546304 TCRBV3S1A0A5B6 114 aa5.66□□□□□ -1.5
PRKDC-211ENST00000546304 SLC22A20A6NK97 555 aa5.66□□□□□ -1.5
PRKDC-211ENST00000546304 KRTAP9-7A8MTY7 169 aa5.66□□□□□ -1.5
PRKDC-211ENST00000546304 A8MVM7 634 aa5.66□□□□□ -1.5
PRKDC-211ENST00000546304 C22orf46C9J442 243 aa5.66□□□□□ -1.5
PRKDC-211ENST00000546304 PYCARD-AS1I3L0S3 204 aa5.66□□□□□ -1.5
PRKDC-211ENST00000546304 J3KTA2 159 aa5.66□□□□□ -1.5
PRKDC-211ENST00000546304 KPNA4O00629 521 aaPredicted RBP5.66□□□□□ -1.5
PRKDC-211ENST00000546304 FFAR1O14842 300 aa5.66□□□□□ -1.5
PRKDC-211ENST00000546304 EFNA2O43921 213 aa5.66□□□□□ -1.5
PRKDC-211ENST00000546304 CXCL13O43927 109 aa5.66□□□□□ -1.5
PRKDC-211ENST00000546304 NPIPB7O75200 414 aa5.66□□□□□ -1.5
PRKDC-211ENST00000546304 DIRAS1O95057 198 aa5.66□□□□□ -1.5
PRKDC-211ENST00000546304 LYPD3O95274 346 aa5.66□□□□□ -1.5
PRKDC-211ENST00000546304 AHSA1O95433 338 aa5.66□□□□□ -1.5
PRKDC-211ENST00000546304 RAP2AP10114 183 aa5.66□□□□□ -1.5
PRKDC-211ENST00000546304 FCGR2AP12318 317 aa5.66□□□□□ -1.5
PRKDC-211ENST00000546304 ITGA2P17301 1181 aa5.66□□□□□ -1.5
PRKDC-211ENST00000546304 HOXB6P17509 224 aaKnown RBP5.66□□□□□ -1.5
PRKDC-211ENST00000546304 RHCEP18577 417 aa5.66□□□□□ -1.5
PRKDC-211ENST00000546304 FKBP2P26885 142 aaKnown RBP5.66□□□□□ -1.5
PRKDC-211ENST00000546304 IFNA8P32881 189 aa5.66□□□□□ -1.5
PRKDC-211ENST00000546304 IDUAP35475 653 aa5.66□□□□□ -1.5
PRKDC-211ENST00000546304 ECI1P42126 302 aa5.66□□□□□ -1.5
PRKDC-211ENST00000546304 RBM34P42696 430 aaKnown RBP5.66□□□□□ -1.5
PRKDC-211ENST00000546304 YAP1P46937 504 aaKnown RBP5.66□□□□□ -1.5
PRKDC-211ENST00000546304 DIO1P49895 249 aa5.66□□□□□ -1.5
PRKDC-211ENST00000546304 SUCLG1P53597 346 aaKnown RBP5.66□□□□□ -1.5
PRKDC-211ENST00000546304 CLDN15P56746 228 aa5.66□□□□□ -1.5
PRKDC-211ENST00000546304 CSNK2A1P68400 391 aaPredicted RBP5.66□□□□□ -1.5
PRKDC-211ENST00000546304 SPIBQ01892 262 aa5.66□□□□□ -1.5
PRKDC-211ENST00000546304 CHRNB3Q05901 458 aa5.66□□□□□ -1.5
PRKDC-211ENST00000546304 ST3GAL3Q11203 375 aa5.66□□□□□ -1.5
PRKDC-211ENST00000546304 PON3Q15166 354 aa5.66□□□□□ -1.5
PRKDC-211ENST00000546304 SF3B4Q15427 424 aaKnown RBP eCLIP5.66□□□□□ -1.5
PRKDC-211ENST00000546304 TMEM176BQ3YBM2 270 aaPredicted RBP5.66□□□□□ -1.5
PRKDC-211ENST00000546304 GXYLT1Q4G148 440 aa5.66□□□□□ -1.5
PRKDC-211ENST00000546304 FGD3Q5JSP0 725 aa5.66□□□□□ -1.5
PRKDC-211ENST00000546304 SLC35F1Q5T1Q4 408 aa5.66□□□□□ -1.5
PRKDC-211ENST00000546304 PDSS1Q5T2R2 415 aa5.66□□□□□ -1.5
PRKDC-211ENST00000546304 C1orf140Q5VVS0 124 aa5.66□□□□□ -1.5
PRKDC-211ENST00000546304 NSUN5P2Q63ZY6 315 aa5.66□□□□□ -1.5
PRKDC-211ENST00000546304 PPP4R4Q6NUP7 873 aa5.66□□□□□ -1.5
PRKDC-211ENST00000546304 C5orf46Q6UWT4 87 aa5.66□□□□□ -1.5
PRKDC-211ENST00000546304 B3GNT6Q6ZMB0 384 aa5.66□□□□□ -1.5
PRKDC-211ENST00000546304 CHMP1BQ7LBR1 199 aa5.66□□□□□ -1.5
PRKDC-211ENST00000546304 GDF7Q7Z4P5 450 aa5.66□□□□□ -1.5
PRKDC-211ENST00000546304 TSEN54Q7Z6J9 526 aaKnown RBP5.66□□□□□ -1.5
PRKDC-211ENST00000546304 ADGRE4PQ86SQ3 457 aa5.66□□□□□ -1.5
PRKDC-211ENST00000546304 DOLPP1Q86YN1 238 aa5.66□□□□□ -1.5
PRKDC-211ENST00000546304 ZDHHC21Q8IVQ6 265 aa5.66□□□□□ -1.5
PRKDC-211ENST00000546304 RPRMLQ8N4K4 120 aa5.66□□□□□ -1.5
PRKDC-211ENST00000546304 FNDC9Q8TBE3 224 aa5.66□□□□□ -1.5
PRKDC-211ENST00000546304 ZPLD1Q8TCW7 415 aa5.66□□□□□ -1.5
PRKDC-211ENST00000546304 CANT1Q8WVQ1 401 aa5.66□□□□□ -1.5
PRKDC-211ENST00000546304 SLC38A4Q969I6 547 aa5.66□□□□□ -1.5
PRKDC-211ENST00000546304 CPNE4Q96A23 557 aaPredicted RBP5.66□□□□□ -1.5
PRKDC-211ENST00000546304 DNAJA3Q96EY1 480 aa5.66□□□□□ -1.5
PRKDC-211ENST00000546304 ZNF845Q96IR2 970 aaPredicted RBP5.66□□□□□ -1.5
PRKDC-211ENST00000546304 MPP4Q96JB8 637 aa5.66□□□□□ -1.5
PRKDC-211ENST00000546304 ARL5BQ96KC2 179 aa5.66□□□□□ -1.5
PRKDC-211ENST00000546304 RAB3IPQ96QF0 476 aaPredicted RBP5.66□□□□□ -1.5
PRKDC-211ENST00000546304 ZNF300Q96RE9 604 aaPredicted RBP5.66□□□□□ -1.5
PRKDC-211ENST00000546304 TRIB1Q96RU8 372 aa5.66□□□□□ -1.5
PRKDC-211ENST00000546304 EPYCQ99645 322 aa5.66□□□□□ -1.5
PRKDC-211ENST00000546304 PIP5K1AQ99755 562 aa5.66□□□□□ -1.5
PRKDC-211ENST00000546304 TMEM43Q9BTV4 400 aa5.66□□□□□ -1.5
PRKDC-211ENST00000546304 PTDSS2Q9BVG9 487 aa5.66□□□□□ -1.5
PRKDC-211ENST00000546304 FNDC11Q9BVV2 318 aa5.66□□□□□ -1.5
PRKDC-211ENST00000546304 SRXN1Q9BYN0 137 aa5.66□□□□□ -1.5
PRKDC-211ENST00000546304 SLC19A3Q9BZV2 496 aa5.66□□□□□ -1.5
PRKDC-211ENST00000546304 IL1RAPQ9NPH3 570 aa5.66□□□□□ -1.5
PRKDC-211ENST00000546304 PAQR5Q9NXK6 330 aaPredicted RBP5.66□□□□□ -1.5
PRKDC-211ENST00000546304 ALKBH4Q9NXW9 302 aa5.66□□□□□ -1.5
PRKDC-211ENST00000546304 RHCGQ9UBD6 479 aa5.66□□□□□ -1.5
PRKDC-211ENST00000546304 TMEFF2Q9UIK5 374 aaPredicted RBP5.66□□□□□ -1.5
PRKDC-211ENST00000546304 RIMS3Q9UJD0 308 aa5.66□□□□□ -1.5
PRKDC-211ENST00000546304 MCTS1Q9ULC4 181 aaKnown RBP5.66□□□□□ -1.5
PRKDC-211ENST00000546304 AURKCQ9UQB9 309 aa5.66□□□□□ -1.5
PRKDC-211ENST00000546304 HDGFL3Q9Y3E1 203 aa5.66□□□□□ -1.5
PRKDC-211ENST00000546304 FAM32AQ9Y421 112 aaKnown RBP5.66□□□□□ -1.5
PRKDC-211ENST00000546304 ZNF175Q9Y473 711 aa5.66□□□□□ -1.5
PRKDC-211ENST00000546304 ALPK2Q86TB3 2170 aa5.66□□□□□ -1.5
PRKDC-211ENST00000546304 ICE1Q9Y2F5 2266 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms