RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 CRYAAP02489 173 aa8.19□□□□□ -1.1
YBX3-218ENST00000546298 PTNP21246 168 aa8.19□□□□□ -1.1
YBX3-218ENST00000546298 SELENOPP49908 381 aa8.19□□□□□ -1.1
YBX3-218ENST00000546298 CLDN17P56750 224 aa8.19□□□□□ -1.1
YBX3-218ENST00000546298 EGR4Q05215 589 aa8.19□□□□□ -1.1
YBX3-218ENST00000546298 DMTNQ08495 405 aa8.19□□□□□ -1.1
YBX3-218ENST00000546298 RBBP4Q09028 425 aa8.19□□□□□ -1.1
YBX3-218ENST00000546298 HIKESHIQ53FT3 197 aa8.19□□□□□ -1.1
YBX3-218ENST00000546298 TTMPQ5BVD1 217 aa8.19□□□□□ -1.1
YBX3-218ENST00000546298 ALG10BQ5I7T1 473 aa8.19□□□□□ -1.1
YBX3-218ENST00000546298 ANKRD16Q6P6B7 361 aa8.19□□□□□ -1.1
YBX3-218ENST00000546298 CLEC2AQ6UVW9 174 aa8.19□□□□□ -1.1
YBX3-218ENST00000546298 H1FNTQ75WM6 255 aaPredicted RBP8.19□□□□□ -1.1
YBX3-218ENST00000546298 RANBP3LQ86VV4 465 aaPredicted RBP8.19□□□□□ -1.1
YBX3-218ENST00000546298 ARMC8Q8IUR7 673 aa8.19□□□□□ -1.1
YBX3-218ENST00000546298 CCDC36Q8IYA8 594 aa8.19□□□□□ -1.1
YBX3-218ENST00000546298 FAM169BQ8N8A8 192 aa8.19□□□□□ -1.1
YBX3-218ENST00000546298 C11orf65Q8NCR3 313 aa8.19□□□□□ -1.1
YBX3-218ENST00000546298 OR1K1Q8NGR3 316 aa8.19□□□□□ -1.1
YBX3-218ENST00000546298 RNF217Q8TC41 542 aa8.19□□□□□ -1.1
YBX3-218ENST00000546298 MAGEE2Q8TD90 523 aaPredicted RBP8.19□□□□□ -1.1
YBX3-218ENST00000546298 CKAP2Q8WWK9 683 aa8.19□□□□□ -1.1
YBX3-218ENST00000546298 BCL2L2Q92843 193 aaPredicted RBP8.19□□□□□ -1.1
YBX3-218ENST00000546298 KTI12Q96EK9 354 aaPredicted RBP8.19□□□□□ -1.1
YBX3-218ENST00000546298 MAGEB18Q96M61 343 aa8.19□□□□□ -1.1
YBX3-218ENST00000546298 SIKE1Q9BRV8 207 aa8.19□□□□□ -1.1
YBX3-218ENST00000546298 PTDSS2Q9BVG9 487 aa8.19□□□□□ -1.1
YBX3-218ENST00000546298 ASPNQ9BXN1 380 aa8.19□□□□□ -1.1
YBX3-218ENST00000546298 VIPAS39Q9H9C1 493 aa8.19□□□□□ -1.1
YBX3-218ENST00000546298 SLC52A3Q9NQ40 469 aa8.19□□□□□ -1.1
YBX3-218ENST00000546298 SLAMF8Q9P0V8 285 aa8.19□□□□□ -1.1
YBX3-218ENST00000546298 GDF2Q9UK05 429 aaPredicted RBP8.19□□□□□ -1.1
YBX3-218ENST00000546298 NDUFAF1Q9Y375 327 aa8.19□□□□□ -1.1
YBX3-218ENST00000546298 CORINQ9Y5Q5 1042 aa8.19□□□□□ -1.1
YBX3-218ENST00000546298 HEATR5AQ86XA9 2040 aa8.19□□□□□ -1.1
YBX3-218ENST00000546298 TRBV5-3A0A0A0MS03 114 aa8.18□□□□□ -1.1
YBX3-218ENST00000546298 ARPC4-TTLL3A0A0A6YYG9 625 aa8.18□□□□□ -1.1
YBX3-218ENST00000546298 ATP6V1G2-DDX39BF2Z307 99 aa8.18□□□□□ -1.1
YBX3-218ENST00000546298 RPL36A-HNRNPH2H7BZ11 118 aa8.18□□□□□ -1.1
YBX3-218ENST00000546298 M0R082 166 aa8.18□□□□□ -1.1
YBX3-218ENST00000546298 TLX2O43763 284 aaPredicted RBP8.18□□□□□ -1.1
YBX3-218ENST00000546298 TPST1O60507 370 aa8.18□□□□□ -1.1
YBX3-218ENST00000546298 FZD7O75084 574 aa8.18□□□□□ -1.1
YBX3-218ENST00000546298 NDUFS7O75251 213 aa8.18□□□□□ -1.1
YBX3-218ENST00000546298 UPK3AO75631 287 aa8.18□□□□□ -1.1
YBX3-218ENST00000546298 CSF3P09919 207 aa8.18□□□□□ -1.1
YBX3-218ENST00000546298 HTR2AP28223 471 aa8.18□□□□□ -1.1
YBX3-218ENST00000546298 GRPRP30550 384 aa8.18□□□□□ -1.1
YBX3-218ENST00000546298 EFNA4P52798 201 aa8.18□□□□□ -1.1
YBX3-218ENST00000546298 IL1RL1Q01638 556 aa8.18□□□□□ -1.1
YBX3-218ENST00000546298 ROR2Q01974 943 aaKnown RBP8.18□□□□□ -1.1
YBX3-218ENST00000546298 SPOCK1Q08629 439 aa8.18□□□□□ -1.1
YBX3-218ENST00000546298 CYP51A1Q16850 503 aa8.18□□□□□ -1.1
YBX3-218ENST00000546298 C3orf36Q3SXR2 165 aa8.18□□□□□ -1.1
YBX3-218ENST00000546298 RUNDC3AQ59EK9 446 aa8.18□□□□□ -1.1
YBX3-218ENST00000546298 SWT1Q5T5J6 900 aaKnown RBP8.18□□□□□ -1.1
YBX3-218ENST00000546298 METTL21CQ5VZV1 264 aa8.18□□□□□ -1.1
YBX3-218ENST00000546298 C11orf71Q6IPW1 123 aa8.18□□□□□ -1.1
YBX3-218ENST00000546298 DLEU7Q6UYE1 221 aa8.18□□□□□ -1.1
YBX3-218ENST00000546298 DNM1P46Q6ZS02 220 aa8.18□□□□□ -1.1
YBX3-218ENST00000546298 SNX32Q86XE0 403 aa8.18□□□□□ -1.1
YBX3-218ENST00000546298 SLC30A8Q8IWU4 369 aa8.18□□□□□ -1.1
YBX3-218ENST00000546298 KDM8Q8N371 416 aa8.18□□□□□ -1.1
YBX3-218ENST00000546298 GPR137CQ8N3F9 429 aa8.18□□□□□ -1.1
YBX3-218ENST00000546298 DPP10Q8N608 796 aa8.18□□□□□ -1.1
YBX3-218ENST00000546298 ADPRHL1Q8NDY3 354 aa8.18□□□□□ -1.1
YBX3-218ENST00000546298 PIK3C3Q8NEB9 887 aa8.18□□□□□ -1.1
YBX3-218ENST00000546298 ZNF417Q8TAU3 575 aa8.18□□□□□ -1.1
YBX3-218ENST00000546298 TAAR8Q969N4 342 aa8.18□□□□□ -1.1
YBX3-218ENST00000546298 ALKBH3Q96Q83 286 aaPredicted RBP8.18□□□□□ -1.1
YBX3-218ENST00000546298 SLC38A2Q96QD8 506 aa8.18□□□□□ -1.1
YBX3-218ENST00000546298 ZNF587Q96SQ5 575 aaPredicted RBP8.18□□□□□ -1.1
YBX3-218ENST00000546298 CGREF1Q99674 301 aa8.18□□□□□ -1.1
YBX3-218ENST00000546298 KATNB1Q9BVA0 655 aa8.18□□□□□ -1.1
YBX3-218ENST00000546298 B3GAT2Q9NPZ5 323 aa8.18□□□□□ -1.1
YBX3-218ENST00000546298 MRGBPQ9NV56 204 aa8.18□□□□□ -1.1
YBX3-218ENST00000546298 FBXO9Q9UK97 447 aaPredicted RBP8.18□□□□□ -1.1
YBX3-218ENST00000546298 MOKQ9UQ07 419 aa8.18□□□□□ -1.1
YBX3-218ENST00000546298 PRR14LQ5THK1 2151 aa8.18□□□□□ -1.1
YBX3-218ENST00000546298 CADP27708 2225 aa8.18□□□□□ -1.1
YBX3-218ENST00000546298 A0A087WUJ7 227 aa8.17□□□□□ -1.1
YBX3-218ENST00000546298 A0A0B4J2E0 115 aa8.17□□□□□ -1.1
YBX3-218ENST00000546298 A0A1B0GX12 115 aa8.17□□□□□ -1.1
YBX3-218ENST00000546298 M0QX08 132 aa8.17□□□□□ -1.1
YBX3-218ENST00000546298 CD5LO43866 347 aa8.17□□□□□ -1.1
YBX3-218ENST00000546298 FMO6PO60774 539 aa8.17□□□□□ -1.1
YBX3-218ENST00000546298 CRLF1O75462 422 aa8.17□□□□□ -1.1
YBX3-218ENST00000546298 ZNF432O94892 652 aa8.17□□□□□ -1.1
YBX3-218ENST00000546298 MFN2O95140 757 aa8.17□□□□□ -1.1
YBX3-218ENST00000546298 MT-ATP6P00846 226 aa8.17□□□□□ -1.1
YBX3-218ENST00000546298 C8BP07358 591 aa8.17□□□□□ -1.1
YBX3-218ENST00000546298 NQO1P15559 274 aaKnown RBP8.17□□□□□ -1.1
YBX3-218ENST00000546298 CBR1P16152 277 aa8.17□□□□□ -1.1
YBX3-218ENST00000546298 SLC25A16P16260 332 aa8.17□□□□□ -1.1
YBX3-218ENST00000546298 AQP1P29972 269 aa8.17□□□□□ -1.1
YBX3-218ENST00000546298 SNRPD2P62316 118 aaKnown RBP8.17□□□□□ -1.1
YBX3-218ENST00000546298 ARF1P84077 181 aaKnown RBP8.17□□□□□ -1.1
YBX3-218ENST00000546298 SLC25A3Q00325 362 aa8.17□□□□□ -1.1
YBX3-218ENST00000546298 PMS2P3Q13401 168 aa8.17□□□□□ -1.1
YBX3-218ENST00000546298 NFYCQ13952 458 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms