RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-217ENST00000546164 FAPQ12884 760 aa10.46□□□□□ -0.73
YBX3-217ENST00000546164 TSPO2Q5TGU0 170 aa10.46□□□□□ -0.73
YBX3-217ENST00000546164 OR7E24Q6IFN5 339 aa10.46□□□□□ -0.73
YBX3-217ENST00000546164 SPNS3Q6ZMD2 512 aa10.46□□□□□ -0.73
YBX3-217ENST00000546164 WDR88Q6ZMY6 472 aa10.46□□□□□ -0.73
YBX3-217ENST00000546164 H1FNTQ75WM6 255 aaPredicted RBP10.46□□□□□ -0.73
YBX3-217ENST00000546164 AAED1Q7RTV5 226 aa10.46□□□□□ -0.73
YBX3-217ENST00000546164 CARM1Q86X55 608 aa10.46□□□□□ -0.73
YBX3-217ENST00000546164 P3H2Q8IVL5 708 aa10.46□□□□□ -0.73
YBX3-217ENST00000546164 UBE2J2Q8N2K1 259 aa10.46□□□□□ -0.73
YBX3-217ENST00000546164 POMGNT2Q8NAT1 580 aa10.46□□□□□ -0.73
YBX3-217ENST00000546164 C1orf162Q8NEQ5 155 aaPredicted RBP10.46□□□□□ -0.73
YBX3-217ENST00000546164 ZNF417Q8TAU3 575 aa10.46□□□□□ -0.73
YBX3-217ENST00000546164 BOD1Q96IK1 185 aa10.46□□□□□ -0.73
YBX3-217ENST00000546164 MUS81Q96NY9 551 aa10.46□□□□□ -0.73
YBX3-217ENST00000546164 OXGR1Q96P68 337 aa10.46□□□□□ -0.73
YBX3-217ENST00000546164 ZNF587Q96SQ5 575 aaPredicted RBP10.46□□□□□ -0.73
YBX3-217ENST00000546164 FOXC2Q99958 501 aa10.46□□□□□ -0.73
YBX3-217ENST00000546164 CXXC4Q9H2H0 198 aa10.46□□□□□ -0.73
YBX3-217ENST00000546164 SLCO5A1Q9H2Y9 848 aa10.46□□□□□ -0.73
YBX3-217ENST00000546164 ALG2Q9H553 416 aa10.46□□□□□ -0.73
YBX3-217ENST00000546164 SLC7A10Q9NS82 523 aa10.46□□□□□ -0.73
YBX3-217ENST00000546164 MRPL39Q9NYK5 338 aaKnown RBP10.46□□□□□ -0.73
YBX3-217ENST00000546164 SEC14L4Q9UDX3 406 aa10.46□□□□□ -0.73
YBX3-217ENST00000546164 SH3GLB1Q9Y371 365 aa10.46□□□□□ -0.73
YBX3-217ENST00000546164 CADP27708 2225 aa10.46□□□□□ -0.74
YBX3-217ENST00000546164 TEP1Q99973 2627 aaKnown RBP10.45□□□□□ -0.74
YBX3-217ENST00000546164 ZNF432O94892 652 aa10.45□□□□□ -0.74
YBX3-217ENST00000546164 OR5F1O95221 314 aa10.45□□□□□ -0.74
YBX3-217ENST00000546164 IGF2P01344 180 aa10.45□□□□□ -0.74
YBX3-217ENST00000546164 ITGA5P08648 1049 aa10.45□□□□□ -0.74
YBX3-217ENST00000546164 THRBP10828 461 aa10.45□□□□□ -0.74
YBX3-217ENST00000546164 ZNF43P17038 809 aa10.45□□□□□ -0.74
YBX3-217ENST00000546164 MPGP29372 298 aa10.45□□□□□ -0.74
YBX3-217ENST00000546164 PSME3P61289 254 aa10.45□□□□□ -0.74
YBX3-217ENST00000546164 SELENOWP63302 87 aa10.45□□□□□ -0.74
YBX3-217ENST00000546164 GABRA6Q16445 453 aa10.45□□□□□ -0.74
YBX3-217ENST00000546164 LRRC23Q53EV4 343 aaPredicted RBP10.45□□□□□ -0.74
YBX3-217ENST00000546164 LURAP1LQ8IV03 231 aa10.45□□□□□ -0.74
YBX3-217ENST00000546164 C17orf78Q8N4C9 275 aa10.45□□□□□ -0.74
YBX3-217ENST00000546164 ANKS4BQ8N8V4 417 aa10.45□□□□□ -0.74
YBX3-217ENST00000546164 RNF217Q8TC41 542 aa10.45□□□□□ -0.74
YBX3-217ENST00000546164 PLPPR2Q96GM1 343 aa10.45□□□□□ -0.74
YBX3-217ENST00000546164 LRRC37BQ96QE4 947 aa10.45□□□□□ -0.74
YBX3-217ENST00000546164 PRSS27Q9BQR3 290 aa10.45□□□□□ -0.74
YBX3-217ENST00000546164 LINC00470Q9BZP3 86 aa10.45□□□□□ -0.74
YBX3-217ENST00000546164 SPAG4Q9NPE6 437 aa10.45□□□□□ -0.74
YBX3-217ENST00000546164 GMPR2Q9P2T1 348 aaKnown RBP10.45□□□□□ -0.74
YBX3-217ENST00000546164 UPB1Q9UBR1 384 aa10.45□□□□□ -0.74
YBX3-217ENST00000546164 PLEKHA6Q9Y2H5 1048 aa10.45□□□□□ -0.74
YBX3-217ENST00000546164 CXCR6O00574 342 aa10.44□□□□□ -0.74
YBX3-217ENST00000546164 TRAF3IP2O43734 574 aaPredicted RBP10.44□□□□□ -0.74
YBX3-217ENST00000546164 DCTN3O75935 186 aa10.44□□□□□ -0.74
YBX3-217ENST00000546164 CD53P19397 219 aa10.44□□□□□ -0.74
YBX3-217ENST00000546164 TNFRSF1BP20333 461 aa10.44□□□□□ -0.74
YBX3-217ENST00000546164 RBM34P42696 430 aaKnown RBP10.44□□□□□ -0.74
YBX3-217ENST00000546164 SELENOPP49908 381 aa10.44□□□□□ -0.74
YBX3-217ENST00000546164 FOXG1P55316 489 aaPredicted RBP10.44□□□□□ -0.74
YBX3-217ENST00000546164 TGFBR3Q03167 851 aa10.44□□□□□ -0.74
YBX3-217ENST00000546164 PPA1Q15181 289 aa10.44□□□□□ -0.74
YBX3-217ENST00000546164 ZNF74Q16587 644 aa10.44□□□□□ -0.74
YBX3-217ENST00000546164 NCMAPQ5T1S8 102 aa10.44□□□□□ -0.74
YBX3-217ENST00000546164 DMRTA1Q5VZB9 504 aa10.44□□□□□ -0.74
YBX3-217ENST00000546164 ADAM5Q6NVV9 412 aa10.44□□□□□ -0.74
YBX3-217ENST00000546164 TTC33Q6PID6 262 aaPredicted RBP10.44□□□□□ -0.74
YBX3-217ENST00000546164 NHLRC1Q6VVB1 395 aa10.44□□□□□ -0.74
YBX3-217ENST00000546164 ZNF704Q6ZNC4 412 aaPredicted RBP10.44□□□□□ -0.74
YBX3-217ENST00000546164 ABHD12BQ7Z5M8 362 aaPredicted RBP10.44□□□□□ -0.74
YBX3-217ENST00000546164 KDM8Q8N371 416 aa10.44□□□□□ -0.74
YBX3-217ENST00000546164 ANKK1Q8NFD2 765 aa10.44□□□□□ -0.74
YBX3-217ENST00000546164 LZICQ8WZA0 190 aa10.44□□□□□ -0.74
YBX3-217ENST00000546164 MUCL1Q96DR8 90 aa10.44□□□□□ -0.74
YBX3-217ENST00000546164 MOGAT1Q96PD6 335 aa10.44□□□□□ -0.74
YBX3-217ENST00000546164 ALPK1Q96QP1 1244 aa10.44□□□□□ -0.74
YBX3-217ENST00000546164 ASPNQ9BXN1 380 aa10.44□□□□□ -0.74
YBX3-217ENST00000546164 ESRP2Q9H6T0 727 aaKnown RBP10.44□□□□□ -0.74
YBX3-217ENST00000546164 FKRPQ9H9S5 495 aa10.44□□□□□ -0.74
YBX3-217ENST00000546164 CCM2LQ9NUG4 571 aaPredicted RBP10.44□□□□□ -0.74
YBX3-217ENST00000546164 FAM53CQ9NYF3 392 aa10.44□□□□□ -0.74
YBX3-217ENST00000546164 ITGB1BP2Q9UKP3 347 aa10.44□□□□□ -0.74
YBX3-217ENST00000546164 SLC7A7Q9UM01 511 aa10.44□□□□□ -0.74
YBX3-217ENST00000546164 MTORP42345 2549 aa10.44□□□□□ -0.74
YBX3-217ENST00000546164 PRRC2AP48634 2157 aaKnown RBP10.43□□□□□ -0.74
YBX3-217ENST00000546164 ALPK2Q86TB3 2170 aa10.43□□□□□ -0.74
YBX3-217ENST00000546164 CIB4A0PJX0 185 aa10.43□□□□□ -0.74
YBX3-217ENST00000546164 LRRN3E7EW58 273 aa10.43□□□□□ -0.74
YBX3-217ENST00000546164 MS4A18H0YCH9 400 aa10.43□□□□□ -0.74
YBX3-217ENST00000546164 RPL36A-HNRNPH2H7BZ11 118 aa10.43□□□□□ -0.74
YBX3-217ENST00000546164 PLPP3O14495 311 aa10.43□□□□□ -0.74
YBX3-217ENST00000546164 AKAP8O43823 692 aaKnown RBP10.43□□□□□ -0.74
YBX3-217ENST00000546164 RAD51DO75771 328 aa10.43□□□□□ -0.74
YBX3-217ENST00000546164 HPRP00739 348 aa10.43□□□□□ -0.74
YBX3-217ENST00000546164 NQO1P15559 274 aaKnown RBP10.43□□□□□ -0.74
YBX3-217ENST00000546164 OR1E2P47887 323 aa10.43□□□□□ -0.74
YBX3-217ENST00000546164 ART1P52961 327 aa10.43□□□□□ -0.74
YBX3-217ENST00000546164 CLDN17P56750 224 aa10.43□□□□□ -0.74
YBX3-217ENST00000546164 TAS2R41P59536 307 aa10.43□□□□□ -0.74
YBX3-217ENST00000546164 PUDPQ08623 228 aa10.43□□□□□ -0.74
YBX3-217ENST00000546164 PMS2P3Q13401 168 aa10.43□□□□□ -0.74
YBX3-217ENST00000546164 PIN1Q13526 163 aaPredicted RBP10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms