RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 LACC1Q8IV20 430 aa7.96□□□□□ -1.14
CLIP1-218ENST00000545889 TOMM5Q8N4H5 51 aa7.96□□□□□ -1.14
CLIP1-218ENST00000545889 OR11G2Q8NGC1 345 aa7.96□□□□□ -1.14
CLIP1-218ENST00000545889 CDS1Q92903 461 aa7.96□□□□□ -1.14
CLIP1-218ENST00000545889 APH1AQ96BI3 265 aa7.96□□□□□ -1.14
CLIP1-218ENST00000545889 GPR78Q96P69 363 aa7.96□□□□□ -1.14
CLIP1-218ENST00000545889 C1QTNF2Q9BXJ5 285 aa7.96□□□□□ -1.14
CLIP1-218ENST00000545889 CHST8Q9H2A9 424 aa7.96□□□□□ -1.14
CLIP1-218ENST00000545889 ZNF768Q9H5H4 540 aaKnown RBP7.96□□□□□ -1.14
CLIP1-218ENST00000545889 NIT2Q9NQR4 276 aa7.96□□□□□ -1.14
CLIP1-218ENST00000545889 ENAMQ9NRM1 1142 aa7.96□□□□□ -1.14
CLIP1-218ENST00000545889 VSX1Q9NZR4 365 aaPredicted RBP7.96□□□□□ -1.14
CLIP1-218ENST00000545889 TP53TG5Q9Y2B4 290 aa7.96□□□□□ -1.14
CLIP1-218ENST00000545889 FAM96BQ9Y3D0 163 aa7.96□□□□□ -1.14
CLIP1-218ENST00000545889 MAB21L2Q9Y586 359 aa7.96□□□□□ -1.14
CLIP1-218ENST00000545889 FAM230AA0A1W2PPH8 454 aa7.96□□□□□ -1.14
CLIP1-218ENST00000545889 A0A1W2PPK0 400 aa7.96□□□□□ -1.14
CLIP1-218ENST00000545889 DCDC2BA2VCK2 349 aa7.96□□□□□ -1.14
CLIP1-218ENST00000545889 RAB3AP20336 220 aa7.96□□□□□ -1.14
CLIP1-218ENST00000545889 CLDN17P56750 224 aa7.96□□□□□ -1.14
CLIP1-218ENST00000545889 WBP2NLQ6ICG8 309 aa7.96□□□□□ -1.14
CLIP1-218ENST00000545889 KLBQ86Z14 1044 aa7.96□□□□□ -1.14
CLIP1-218ENST00000545889 ZNF584Q8IVC4 421 aa7.96□□□□□ -1.14
CLIP1-218ENST00000545889 CYB561A3Q8NBI2 242 aa7.96□□□□□ -1.14
CLIP1-218ENST00000545889 INO80EQ8NBZ0 244 aaPredicted RBP7.96□□□□□ -1.14
CLIP1-218ENST00000545889 C11orf40Q8WZ69 217 aa7.96□□□□□ -1.14
CLIP1-218ENST00000545889 TMEM80Q96HE8 168 aa7.96□□□□□ -1.14
CLIP1-218ENST00000545889 BOD1Q96IK1 185 aa7.96□□□□□ -1.14
CLIP1-218ENST00000545889 B3GNT2Q9NY97 397 aa7.96□□□□□ -1.14
CLIP1-218ENST00000545889 WSB2Q9NYS7 404 aaPredicted RBP7.96□□□□□ -1.14
CLIP1-218ENST00000545889 TBC1D29Q9UFV1 150 aa7.96□□□□□ -1.14
CLIP1-218ENST00000545889 KLHL21Q9UJP4 597 aa7.96□□□□□ -1.14
CLIP1-218ENST00000545889 ASB1Q9Y576 335 aa7.96□□□□□ -1.14
CLIP1-218ENST00000545889 TNFSF14O43557 240 aa7.95□□□□□ -1.14
CLIP1-218ENST00000545889 CTNSO60931 367 aa7.95□□□□□ -1.14
CLIP1-218ENST00000545889 IL2RGP31785 369 aa7.95□□□□□ -1.14
CLIP1-218ENST00000545889 PPIAP62937 165 aaKnown RBP7.95□□□□□ -1.14
CLIP1-218ENST00000545889 HES1Q14469 280 aa7.95□□□□□ -1.14
CLIP1-218ENST00000545889 ATP6AP1Q15904 470 aa7.95□□□□□ -1.14
CLIP1-218ENST00000545889 KIAA1614Q5VZ46 1190 aa7.95□□□□□ -1.14
CLIP1-218ENST00000545889 PIGCQ92535 297 aa7.95□□□□□ -1.14
CLIP1-218ENST00000545889 L3HYPDHQ96EM0 354 aa7.95□□□□□ -1.14
CLIP1-218ENST00000545889 HYLS1Q96M11 299 aa7.95□□□□□ -1.14
CLIP1-218ENST00000545889 KLHL15Q96M94 604 aa7.95□□□□□ -1.14
CLIP1-218ENST00000545889 CHIAQ9BZP6 476 aa7.95□□□□□ -1.14
CLIP1-218ENST00000545889 ATG5Q9H1Y0 275 aa7.95□□□□□ -1.14
CLIP1-218ENST00000545889 NLKQ9UBE8 527 aa7.95□□□□□ -1.14
CLIP1-218ENST00000545889 SLC7A7Q9UM01 511 aa7.95□□□□□ -1.14
CLIP1-218ENST00000545889 PROCRQ9UNN8 238 aa7.95□□□□□ -1.14
CLIP1-218ENST00000545889 POM121CA8CG34 1229 aa7.95□□□□□ -1.14
CLIP1-218ENST00000545889 LGALS8O00214 317 aa7.95□□□□□ -1.14
CLIP1-218ENST00000545889 TO15178 435 aa7.95□□□□□ -1.14
CLIP1-218ENST00000545889 PLRG1O43660 514 aaKnown RBP7.95□□□□□ -1.14
CLIP1-218ENST00000545889 SLC16A7O60669 478 aa7.95□□□□□ -1.14
CLIP1-218ENST00000545889 C1QAP02745 245 aa7.95□□□□□ -1.14
CLIP1-218ENST00000545889 RPS17P08708 135 aaKnown RBP7.95□□□□□ -1.14
CLIP1-218ENST00000545889 BCL6P41182 706 aa7.95□□□□□ -1.14
CLIP1-218ENST00000545889 CDKN2CP42773 168 aa7.95□□□□□ -1.14
CLIP1-218ENST00000545889 ACTA2P62736 377 aa7.95□□□□□ -1.14
CLIP1-218ENST00000545889 GNB2P62879 340 aa7.95□□□□□ -1.14
CLIP1-218ENST00000545889 ACTG2P63267 376 aa7.95□□□□□ -1.14
CLIP1-218ENST00000545889 OR8B8Q15620 311 aa7.95□□□□□ -1.14
CLIP1-218ENST00000545889 PAN3Q58A45 887 aaKnown RBP7.95□□□□□ -1.14
CLIP1-218ENST00000545889 TMEM71Q6P5X7 295 aa7.95□□□□□ -1.14
CLIP1-218ENST00000545889 MFSD4AQ8N468 514 aa7.95□□□□□ -1.14
CLIP1-218ENST00000545889 ZNF740Q8NDX6 193 aa7.95□□□□□ -1.14
CLIP1-218ENST00000545889 OR10Z1Q8NGY1 313 aa7.95□□□□□ -1.14
CLIP1-218ENST00000545889 C8orf44Q96CB5 159 aa7.95□□□□□ -1.14
CLIP1-218ENST00000545889 FAM46AQ96IP4 442 aaKnown RBP7.95□□□□□ -1.14
CLIP1-218ENST00000545889 CCDC74BQ96LY2 380 aa7.95□□□□□ -1.14
CLIP1-218ENST00000545889 C3orf30Q96M34 536 aa7.95□□□□□ -1.14
CLIP1-218ENST00000545889 ITPAQ9BY32 194 aa7.95□□□□□ -1.14
CLIP1-218ENST00000545889 TMEM45AQ9NWC5 275 aa7.95□□□□□ -1.14
CLIP1-218ENST00000545889 KLHL9Q9P2J3 617 aa7.95□□□□□ -1.14
CLIP1-218ENST00000545889 IER3IP1Q9Y5U9 82 aa7.95□□□□□ -1.14
CLIP1-218ENST00000545889 DOCK8Q8NF50 2099 aa7.95□□□□□ -1.14
CLIP1-218ENST00000545889 H0YAE9 185 aa7.95□□□□□ -1.14
CLIP1-218ENST00000545889 STK17BO94768 372 aa7.95□□□□□ -1.14
CLIP1-218ENST00000545889 CRYBA1P05813 215 aa7.95□□□□□ -1.14
CLIP1-218ENST00000545889 MAGEA12P43365 314 aa7.95□□□□□ -1.14
CLIP1-218ENST00000545889 ERVK-25P63136 954 aa7.95□□□□□ -1.14
CLIP1-218ENST00000545889 EIF2B1Q14232 305 aaKnown RBP7.95□□□□□ -1.14
CLIP1-218ENST00000545889 LEXMQ3ZCV2 418 aa7.95□□□□□ -1.14
CLIP1-218ENST00000545889 HES3Q5TGS1 186 aa7.95□□□□□ -1.14
CLIP1-218ENST00000545889 EIF5AL1Q6IS14 154 aaKnown RBP7.95□□□□□ -1.14
CLIP1-218ENST00000545889 CREB3L2Q70SY1 520 aa7.95□□□□□ -1.14
CLIP1-218ENST00000545889 KCTD9Q7L273 389 aa7.95□□□□□ -1.14
CLIP1-218ENST00000545889 YRDCQ86U90 279 aaKnown RBP7.95□□□□□ -1.14
CLIP1-218ENST00000545889 HS3ST5Q8IZT8 346 aa7.95□□□□□ -1.14
CLIP1-218ENST00000545889 OR5D16Q8NGK9 328 aa7.95□□□□□ -1.14
CLIP1-218ENST00000545889 DPH1Q9BZG8 443 aa7.95□□□□□ -1.14
CLIP1-218ENST00000545889 RNF32Q9H0A6 362 aa7.95□□□□□ -1.14
CLIP1-218ENST00000545889 BDP1A6H8Y1 2624 aa7.95□□□□□ -1.14
CLIP1-218ENST00000545889 TDRD6O60522 2096 aaKnown RBP7.95□□□□□ -1.14
CLIP1-218ENST00000545889 NUP214P35658 2090 aaPredicted RBP7.95□□□□□ -1.14
CLIP1-218ENST00000545889 PIGBOS1A0A0B4J2F0 54 aa7.94□□□□□ -1.14
CLIP1-218ENST00000545889 A0A1W2PPC1 479 aa7.94□□□□□ -1.14
CLIP1-218ENST00000545889 A0A1W2PPH5 198 aa7.94□□□□□ -1.14
CLIP1-218ENST00000545889 MEGF11A6BM72 1044 aa7.94□□□□□ -1.14
CLIP1-218ENST00000545889 M0R3H8 397 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms