RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 FIS1Q9Y3D6 152 aa12.63□□□□□ -0.39
RTN3-214ENST00000545432 TRIM13O60858 407 aa12.62□□□□□ -0.39
RTN3-214ENST00000545432 CHRNGP07510 517 aa12.62□□□□□ -0.39
RTN3-214ENST00000545432 ARAFP10398 606 aa12.62□□□□□ -0.39
RTN3-214ENST00000545432 UQCRC2P22695 453 aa12.62□□□□□ -0.39
RTN3-214ENST00000545432 SOAT1P35610 550 aa12.62□□□□□ -0.39
RTN3-214ENST00000545432 PCLAFQ15004 111 aa12.62□□□□□ -0.39
RTN3-214ENST00000545432 MMEL1Q495T6 779 aa12.62□□□□□ -0.39
RTN3-214ENST00000545432 NIPAL3Q6P499 406 aa12.62□□□□□ -0.39
RTN3-214ENST00000545432 ZNF627Q7L945 461 aa12.62□□□□□ -0.39
RTN3-214ENST00000545432 GPAT4Q86UL3 456 aa12.62□□□□□ -0.39
RTN3-214ENST00000545432 DDIASQ8IXT1 998 aa12.62□□□□□ -0.39
RTN3-214ENST00000545432 SYT14Q8NB59 555 aa12.62□□□□□ -0.39
RTN3-214ENST00000545432 RAB8BQ92930 207 aa12.62□□□□□ -0.39
RTN3-214ENST00000545432 LRRC58Q96CX6 371 aa12.62□□□□□ -0.39
RTN3-214ENST00000545432 ZNF837Q96EG3 531 aaPredicted RBP12.62□□□□□ -0.39
RTN3-214ENST00000545432 NEURL3Q96EH8 262 aa12.62□□□□□ -0.39
RTN3-214ENST00000545432 SLC6A7Q99884 636 aa12.62□□□□□ -0.39
RTN3-214ENST00000545432 ZNF416Q9BWM5 594 aa12.62□□□□□ -0.39
RTN3-214ENST00000545432 SLC38A1Q9H2H9 487 aa12.62□□□□□ -0.39
RTN3-214ENST00000545432 NTN4Q9HB63 628 aa12.62□□□□□ -0.39
RTN3-214ENST00000545432 ASIC5Q9NY37 505 aa12.62□□□□□ -0.39
RTN3-214ENST00000545432 CFAP73A6NFT4 308 aa12.61□□□□□ -0.39
RTN3-214ENST00000545432 A8MVM7 634 aa12.61□□□□□ -0.39
RTN3-214ENST00000545432 FTCDNL1E5RQL4 147 aa12.61□□□□□ -0.39
RTN3-214ENST00000545432 FRS3O43559 492 aa12.61□□□□□ -0.39
RTN3-214ENST00000545432 PLPP2O43688 288 aa12.61□□□□□ -0.39
RTN3-214ENST00000545432 NPHS1O60500 1241 aa12.61□□□□□ -0.39
RTN3-214ENST00000545432 BCL10O95999 233 aa12.61□□□□□ -0.39
RTN3-214ENST00000545432 TFPTP0C1Z6 253 aa12.61□□□□□ -0.39
RTN3-214ENST00000545432 ADRA2CP18825 462 aa12.61□□□□□ -0.39
RTN3-214ENST00000545432 ACAA2P42765 397 aaKnown RBP12.61□□□□□ -0.39
RTN3-214ENST00000545432 SEC24CP53992 1094 aa12.61□□□□□ -0.39
RTN3-214ENST00000545432 OR4F3Q6IEY1 312 aa12.61□□□□□ -0.39
RTN3-214ENST00000545432 SYT10Q6XYQ8 523 aa12.61□□□□□ -0.39
RTN3-214ENST00000545432 MDP1Q86V88 176 aa12.61□□□□□ -0.39
RTN3-214ENST00000545432 NANPQ8TBE9 248 aa12.61□□□□□ -0.39
RTN3-214ENST00000545432 RNF217Q8TC41 542 aa12.61□□□□□ -0.39
RTN3-214ENST00000545432 TRNT1Q96Q11 434 aaKnown RBP12.61□□□□□ -0.39
RTN3-214ENST00000545432 C1orf50Q9BV19 199 aa12.61□□□□□ -0.39
RTN3-214ENST00000545432 SLITRK2Q9H156 845 aa12.61□□□□□ -0.39
RTN3-214ENST00000545432 ZNF665Q9H7R5 613 aa12.61□□□□□ -0.39
RTN3-214ENST00000545432 MTHFD2LQ9H903 347 aaPredicted RBP12.61□□□□□ -0.39
RTN3-214ENST00000545432 CRLF2Q9HC73 371 aa12.61□□□□□ -0.39
RTN3-214ENST00000545432 GPR35Q9HC97 309 aa12.61□□□□□ -0.39
RTN3-214ENST00000545432 TBK1Q9UHD2 729 aa12.61□□□□□ -0.39
RTN3-214ENST00000545432 OPN4Q9UHM6 478 aa12.61□□□□□ -0.39
RTN3-214ENST00000545432 ZNF281Q9Y2X9 895 aa12.61□□□□□ -0.39
RTN3-214ENST00000545432 DSPPQ9NZW4 1301 aa12.61□□□□□ -0.39
RTN3-214ENST00000545432 A0A0G2JMP0 313 aa12.6□□□□□ -0.39
RTN3-214ENST00000545432 A0A0X1KG70 313 aa12.6□□□□□ -0.39
RTN3-214ENST00000545432 LOC102725191A0A1B0GVB3 256 aa12.6□□□□□ -0.39
RTN3-214ENST00000545432 PRSS51A0A1B0GVH4 220 aa12.6□□□□□ -0.39
RTN3-214ENST00000545432 POM121CA8CG34 1229 aa12.6□□□□□ -0.39
RTN3-214ENST00000545432 HMGN4O00479 90 aa12.6□□□□□ -0.39
RTN3-214ENST00000545432 NCR1O76036 304 aa12.6□□□□□ -0.39
RTN3-214ENST00000545432 G6PDP11413 515 aa12.6□□□□□ -0.39
RTN3-214ENST00000545432 ZNF14P17017 642 aaPredicted RBP12.6□□□□□ -0.39
RTN3-214ENST00000545432 GATA3P23771 443 aa12.6□□□□□ -0.39
RTN3-214ENST00000545432 EMX2Q04743 252 aa12.6□□□□□ -0.39
RTN3-214ENST00000545432 SMU1Q2TAY7 513 aa12.6□□□□□ -0.39
RTN3-214ENST00000545432 KRT80Q6KB66 452 aa12.6□□□□□ -0.39
RTN3-214ENST00000545432 TNFAIP8L2Q6P589 184 aaPredicted RBP12.6□□□□□ -0.39
RTN3-214ENST00000545432 LRRC74BQ6ZQY2 392 aa12.6□□□□□ -0.39
RTN3-214ENST00000545432 ZNF440Q8IYI8 595 aa12.6□□□□□ -0.39
RTN3-214ENST00000545432 NOA1Q8NC60 698 aaKnown RBP12.6□□□□□ -0.39
RTN3-214ENST00000545432 OR4M2Q8NGB6 313 aa12.6□□□□□ -0.39
RTN3-214ENST00000545432 MFSD8Q8NHS3 518 aa12.6□□□□□ -0.39
RTN3-214ENST00000545432 TAPBPLQ9BX59 468 aa12.6□□□□□ -0.39
RTN3-214ENST00000545432 DENND2DQ9H6A0 471 aaPredicted RBP12.6□□□□□ -0.39
RTN3-214ENST00000545432 NARFLQ9H6Q4 476 aa12.6□□□□□ -0.39
RTN3-214ENST00000545432 B3GAT1Q9P2W7 334 aa12.6□□□□□ -0.39
RTN3-214ENST00000545432 NOTCH1P46531 2555 aa12.6□□□□□ -0.39
RTN3-214ENST00000545432 VWFP04275 2813 aa12.59□□□□□ -0.39
RTN3-214ENST00000545432 ZNF99A8MXY4 864 aaPredicted RBP12.59□□□□□ -0.39
RTN3-214ENST00000545432 SKAP2O75563 359 aaPredicted RBP12.59□□□□□ -0.39
RTN3-214ENST00000545432 MPZL1O95297 269 aa12.59□□□□□ -0.39
RTN3-214ENST00000545432 CHRM4P08173 479 aa12.59□□□□□ -0.39
RTN3-214ENST00000545432 CXCR1P25024 350 aa12.59□□□□□ -0.39
RTN3-214ENST00000545432 ALDH3B1P43353 468 aa12.59□□□□□ -0.39
RTN3-214ENST00000545432 TXNL4AP83876 142 aaKnown RBP12.59□□□□□ -0.39
RTN3-214ENST00000545432 MRPL2Q5T653 305 aaKnown RBP12.59□□□□□ -0.39
RTN3-214ENST00000545432 C1orf140Q5VVS0 124 aa12.59□□□□□ -0.39
RTN3-214ENST00000545432 HMGN2P46Q86SG4 172 aa12.59□□□□□ -0.39
RTN3-214ENST00000545432 LRP11Q86VZ4 500 aa12.59□□□□□ -0.39
RTN3-214ENST00000545432 FNDC5Q8NAU1 212 aa12.59□□□□□ -0.39
RTN3-214ENST00000545432 STK35Q8TDR2 534 aa12.59□□□□□ -0.39
RTN3-214ENST00000545432 DDX28Q9NUL7 540 aaKnown RBP12.59□□□□□ -0.39
RTN3-214ENST00000545432 NKIRAS2Q9NYR9 191 aa12.59□□□□□ -0.39
RTN3-214ENST00000545432 MYEF2Q9P2K5 600 aaKnown RBP12.59□□□□□ -0.39
RTN3-214ENST00000545432 MID2Q9UJV3 735 aa12.59□□□□□ -0.39
RTN3-214ENST00000545432 A0A096LPI6 279 aa12.58□□□□□ -0.4
RTN3-214ENST00000545432 CDHR4A6H8M9 788 aa12.58□□□□□ -0.4
RTN3-214ENST00000545432 PPIHO43447 177 aaKnown RBP12.58□□□□□ -0.4
RTN3-214ENST00000545432 PRSS23O95084 383 aa12.58□□□□□ -0.4
RTN3-214ENST00000545432 UQCRBP14927 111 aa12.58□□□□□ -0.4
RTN3-214ENST00000545432 TCN1P20061 433 aaPredicted RBP12.58□□□□□ -0.4
RTN3-214ENST00000545432 PRTN3P24158 256 aa12.58□□□□□ -0.4
RTN3-214ENST00000545432 FPR2P25090 351 aa12.58□□□□□ -0.4
RTN3-214ENST00000545432 ARRB2P32121 409 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms