RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 ZNF35P13682 527 aa8.01□□□□□ -1.13
CHD4-212ENST00000545083 GCH1P30793 250 aa8.01□□□□□ -1.13
CHD4-212ENST00000545083 GLRXP35754 106 aa8.01□□□□□ -1.13
CHD4-212ENST00000545083 CAPZA2P47755 286 aa8.01□□□□□ -1.13
CHD4-212ENST00000545083 BNIP2Q12982 314 aa8.01□□□□□ -1.13
CHD4-212ENST00000545083 FXNQ16595 210 aa8.01□□□□□ -1.13
CHD4-212ENST00000545083 CEACAM16Q2WEN9 425 aa8.01□□□□□ -1.13
CHD4-212ENST00000545083 ALKBH6Q3KRA9 238 aa8.01□□□□□ -1.13
CHD4-212ENST00000545083 LSM12Q3MHD2 195 aaKnown RBP8.01□□□□□ -1.13
CHD4-212ENST00000545083 FAM153CQ494X1 144 aa8.01□□□□□ -1.13
CHD4-212ENST00000545083 CFAP157Q5JU67 520 aa8.01□□□□□ -1.13
CHD4-212ENST00000545083 REP15Q6BDI9 236 aa8.01□□□□□ -1.13
CHD4-212ENST00000545083 TNFAIP8L2Q6P589 184 aaPredicted RBP8.01□□□□□ -1.13
CHD4-212ENST00000545083 RBMS3Q6XE24 437 aaKnown RBP8.01□□□□□ -1.13
CHD4-212ENST00000545083 RNF165Q6ZSG1 346 aa8.01□□□□□ -1.13
CHD4-212ENST00000545083 C16orf62Q7Z3J2 963 aa8.01□□□□□ -1.13
CHD4-212ENST00000545083 C1QL4Q86Z23 238 aa8.01□□□□□ -1.13
CHD4-212ENST00000545083 CLECL1Q8IZS7 167 aa8.01□□□□□ -1.13
CHD4-212ENST00000545083 KDM8Q8N371 416 aa8.01□□□□□ -1.13
CHD4-212ENST00000545083 XAGE5Q8WWM1 108 aa8.01□□□□□ -1.13
CHD4-212ENST00000545083 RAB39BQ96DA2 213 aa8.01□□□□□ -1.13
CHD4-212ENST00000545083 CCDC126Q96EE4 140 aa8.01□□□□□ -1.13
CHD4-212ENST00000545083 SLC35G5Q96KT7 338 aa8.01□□□□□ -1.13
CHD4-212ENST00000545083 ZNF75AQ96N20 296 aa8.01□□□□□ -1.13
CHD4-212ENST00000545083 C1orf50Q9BV19 199 aa8.01□□□□□ -1.13
CHD4-212ENST00000545083 GPR35Q9HC97 309 aa8.01□□□□□ -1.13
CHD4-212ENST00000545083 B3GNT2Q9NY97 397 aa8.01□□□□□ -1.13
CHD4-212ENST00000545083 WIPI2Q9Y4P8 454 aa8.01□□□□□ -1.13
CHD4-212ENST00000545083 DNAJC15Q9Y5T4 150 aa8.01□□□□□ -1.13
CHD4-212ENST00000545083 CACNG2Q9Y698 323 aa8.01□□□□□ -1.13
CHD4-212ENST00000545083 A0A087WUV0 522 aaPredicted RBP8□□□□□ -1.13
CHD4-212ENST00000545083 RNF103-CHMP3A0A140T963 221 aa8□□□□□ -1.13
CHD4-212ENST00000545083 EXOC1LA0A1B0GW35 172 aa8□□□□□ -1.13
CHD4-212ENST00000545083 TMEM233B4DJY2 109 aa8□□□□□ -1.13
CHD4-212ENST00000545083 FRS3O43559 492 aa8□□□□□ -1.13
CHD4-212ENST00000545083 ZNF432O94892 652 aa8□□□□□ -1.13
CHD4-212ENST00000545083 C1QCP02747 245 aa8□□□□□ -1.13
CHD4-212ENST00000545083 CHRM4P08173 479 aa8□□□□□ -1.13
CHD4-212ENST00000545083 GUSBP08236 651 aa8□□□□□ -1.13
CHD4-212ENST00000545083 ZNF14P17017 642 aaPredicted RBP8□□□□□ -1.13
CHD4-212ENST00000545083 OMGP23515 440 aa8□□□□□ -1.13
CHD4-212ENST00000545083 RPL3P39023 403 aaKnown RBP8□□□□□ -1.13
CHD4-212ENST00000545083 CLDN17P56750 224 aa8□□□□□ -1.13
CHD4-212ENST00000545083 DNAJB13P59910 316 aa8□□□□□ -1.13
CHD4-212ENST00000545083 LCN2P80188 198 aa8□□□□□ -1.13
CHD4-212ENST00000545083 BAMBIQ13145 260 aa8□□□□□ -1.13
CHD4-212ENST00000545083 KLF17Q5JT82 389 aaPredicted RBP8□□□□□ -1.13
CHD4-212ENST00000545083 PHYHD1Q5SRE7 291 aa8□□□□□ -1.13
CHD4-212ENST00000545083 PRAMEF8Q5VWM4 474 aa8□□□□□ -1.13
CHD4-212ENST00000545083 PRAMEF7Q5VXH5 474 aa8□□□□□ -1.13
CHD4-212ENST00000545083 KANK2Q63ZY3 851 aa8□□□□□ -1.13
CHD4-212ENST00000545083 ZNF771Q7L3S4 317 aaPredicted RBP8□□□□□ -1.13
CHD4-212ENST00000545083 RIMKLAQ8IXN7 391 aa8□□□□□ -1.13
CHD4-212ENST00000545083 GSPT2Q8IYD1 628 aaKnown RBP8□□□□□ -1.13
CHD4-212ENST00000545083 SYT14Q8NB59 555 aa8□□□□□ -1.13
CHD4-212ENST00000545083 DEFB108BQ8NET1 73 aa8□□□□□ -1.13
CHD4-212ENST00000545083 IL17RDQ8NFM7 739 aa8□□□□□ -1.13
CHD4-212ENST00000545083 MIPOL1Q8TD10 442 aa8□□□□□ -1.13
CHD4-212ENST00000545083 MZB1Q8WU39 189 aa8□□□□□ -1.13
CHD4-212ENST00000545083 OIT3Q8WWZ8 545 aa8□□□□□ -1.13
CHD4-212ENST00000545083 ROPN1LQ96C74 230 aa8□□□□□ -1.13
CHD4-212ENST00000545083 TSPAN32Q96QS1 320 aa8□□□□□ -1.13
CHD4-212ENST00000545083 DUSP26Q9BV47 211 aa8□□□□□ -1.13
CHD4-212ENST00000545083 ZNF385DQ9H6B1 395 aa8□□□□□ -1.13
CHD4-212ENST00000545083 ZMAT3Q9HA38 289 aaKnown RBP8□□□□□ -1.13
CHD4-212ENST00000545083 POLE3Q9NRF9 147 aa8□□□□□ -1.13
CHD4-212ENST00000545083 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8□□□□□ -1.13
CHD4-212ENST00000545083 EXD2Q9NVH0 621 aa8□□□□□ -1.13
CHD4-212ENST00000545083 ATAD3AQ9NVI7 634 aa8□□□□□ -1.13
CHD4-212ENST00000545083 DUSP13Q9UII6 198 aa8□□□□□ -1.13
CHD4-212ENST00000545083 SOX21Q9Y651 276 aaPredicted RBP8□□□□□ -1.13
CHD4-212ENST00000545083 A0A1W2PPW3 197 aa7.99□□□□□ -1.13
CHD4-212ENST00000545083 TMEM114B3SHH9 223 aa7.99□□□□□ -1.13
CHD4-212ENST00000545083 FAAHO00519 579 aa7.99□□□□□ -1.13
CHD4-212ENST00000545083 PEX11AO75192 247 aa7.99□□□□□ -1.13
CHD4-212ENST00000545083 ALX3O95076 343 aa7.99□□□□□ -1.13
CHD4-212ENST00000545083 VAMP5O95183 116 aa7.99□□□□□ -1.13
CHD4-212ENST00000545083 CLPTM1O96005 669 aa7.99□□□□□ -1.13
CHD4-212ENST00000545083 GATA3P23771 443 aa7.99□□□□□ -1.13
CHD4-212ENST00000545083 ECHS1P30084 290 aa7.99□□□□□ -1.13
CHD4-212ENST00000545083 MAP2K6P52564 334 aa7.99□□□□□ -1.13
CHD4-212ENST00000545083 NAA20P61599 178 aa7.99□□□□□ -1.13
CHD4-212ENST00000545083 CCL8P80075 99 aa7.99□□□□□ -1.13
CHD4-212ENST00000545083 PIGFQ07326 219 aa7.99□□□□□ -1.13
CHD4-212ENST00000545083 EPS8Q12929 822 aa7.99□□□□□ -1.13
CHD4-212ENST00000545083 SLC9A3R2Q15599 337 aa7.99□□□□□ -1.13
CHD4-212ENST00000545083 UGT3A2Q3SY77 523 aa7.99□□□□□ -1.13
CHD4-212ENST00000545083 GLIPR1L2Q4G1C9 344 aa7.99□□□□□ -1.13
CHD4-212ENST00000545083 RHOUQ7L0Q8 258 aa7.99□□□□□ -1.13
CHD4-212ENST00000545083 WDFY1Q8IWB7 410 aa7.99□□□□□ -1.13
CHD4-212ENST00000545083 DDIASQ8IXT1 998 aa7.99□□□□□ -1.13
CHD4-212ENST00000545083 NATD1Q8N6N6 113 aa7.99□□□□□ -1.13
CHD4-212ENST00000545083 ANKK1Q8NFD2 765 aa7.99□□□□□ -1.13
CHD4-212ENST00000545083 TWIST2Q8WVJ9 160 aa7.99□□□□□ -1.13
CHD4-212ENST00000545083 WFDC12Q8WWY7 111 aa7.99□□□□□ -1.13
CHD4-212ENST00000545083 GTF3AQ92664 365 aaKnown RBP7.99□□□□□ -1.13
CHD4-212ENST00000545083 TMIGD2Q96BF3 282 aa7.99□□□□□ -1.13
CHD4-212ENST00000545083 TAPBPLQ9BX59 468 aa7.99□□□□□ -1.13
CHD4-212ENST00000545083 MMP26Q9NRE1 261 aa7.99□□□□□ -1.13
CHD4-212ENST00000545083 ZNF224Q9NZL3 707 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms