RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 TTC33Q6PID6 262 aaPredicted RBP13.85□□□□□ -0.19
CCDC78-216ENST00000544996 LINC00114Q6XXX2 140 aa13.85□□□□□ -0.19
CCDC78-216ENST00000544996 C20orf204Q6ZNR8 217 aa13.85□□□□□ -0.19
CCDC78-216ENST00000544996 SCAIQ8N9R8 606 aa13.85□□□□□ -0.19
CCDC78-216ENST00000544996 ADPRHL1Q8NDY3 354 aa13.85□□□□□ -0.19
CCDC78-216ENST00000544996 C1orf162Q8NEQ5 155 aaPredicted RBP13.85□□□□□ -0.19
CCDC78-216ENST00000544996 OR4D11Q8NGI4 311 aa13.85□□□□□ -0.19
CCDC78-216ENST00000544996 PIGTQ969N2 578 aa13.85□□□□□ -0.19
CCDC78-216ENST00000544996 TPD52L3Q96J77 140 aa13.85□□□□□ -0.19
CCDC78-216ENST00000544996 MUS81Q96NY9 551 aa13.85□□□□□ -0.19
CCDC78-216ENST00000544996 ALPK1Q96QP1 1244 aa13.85□□□□□ -0.19
CCDC78-216ENST00000544996 POLR2J2Q9GZM3 115 aaKnown RBP13.85□□□□□ -0.19
CCDC78-216ENST00000544996 POLR2J3Q9H1A7 115 aaKnown RBP13.85□□□□□ -0.19
CCDC78-216ENST00000544996 SEC14L4Q9UDX3 406 aa13.85□□□□□ -0.19
CCDC78-216ENST00000544996 SLC7A7Q9UM01 511 aa13.85□□□□□ -0.19
CCDC78-216ENST00000544996 RNF115Q9Y4L5 304 aa13.85□□□□□ -0.19
CCDC78-216ENST00000544996 SPG11Q96JI7 2443 aa13.85□□□□□ -0.19
CCDC78-216ENST00000544996 OTOGQ6ZRI0 2925 aa13.84□□□□□ -0.19
CCDC78-216ENST00000544996 ZNF587BE7ETH6 402 aa13.84□□□□□ -0.19
CCDC78-216ENST00000544996 PDLIM1O00151 329 aa13.84□□□□□ -0.19
CCDC78-216ENST00000544996 CLOCKO15516 846 aa13.84□□□□□ -0.19
CCDC78-216ENST00000544996 AKAP8O43823 692 aaKnown RBP13.84□□□□□ -0.19
CCDC78-216ENST00000544996 BGLAPP02818 100 aa13.84□□□□□ -0.19
CCDC78-216ENST00000544996 ITGA5P08648 1049 aa13.84□□□□□ -0.19
CCDC78-216ENST00000544996 CD53P19397 219 aa13.84□□□□□ -0.19
CCDC78-216ENST00000544996 PTNP21246 168 aa13.84□□□□□ -0.19
CCDC78-216ENST00000544996 SELENOPP49908 381 aa13.84□□□□□ -0.19
CCDC78-216ENST00000544996 CLDN17P56750 224 aa13.84□□□□□ -0.19
CCDC78-216ENST00000544996 TAS2R41P59536 307 aa13.84□□□□□ -0.19
CCDC78-216ENST00000544996 SELENOWP63302 87 aa13.84□□□□□ -0.19
CCDC78-216ENST00000544996 GABRA6Q16445 453 aa13.84□□□□□ -0.19
CCDC78-216ENST00000544996 NCMAPQ5T1S8 102 aa13.84□□□□□ -0.19
CCDC78-216ENST00000544996 C9orf135Q5VTT2 229 aa13.84□□□□□ -0.19
CCDC78-216ENST00000544996 DEF8Q6ZN54 512 aa13.84□□□□□ -0.19
CCDC78-216ENST00000544996 UEVLDQ8IX04 471 aa13.84□□□□□ -0.19
CCDC78-216ENST00000544996 OR52N5Q8NH56 324 aa13.84□□□□□ -0.19
CCDC78-216ENST00000544996 SLC41A3Q96GZ6 507 aa13.84□□□□□ -0.19
CCDC78-216ENST00000544996 TMEM204Q9BSN7 226 aa13.84□□□□□ -0.19
CCDC78-216ENST00000544996 SLC19A3Q9BZV2 496 aa13.84□□□□□ -0.19
CCDC78-216ENST00000544996 CXXC4Q9H2H0 198 aa13.84□□□□□ -0.19
CCDC78-216ENST00000544996 ALG2Q9H553 416 aa13.84□□□□□ -0.19
CCDC78-216ENST00000544996 BEX4Q9NWD9 120 aaPredicted RBP13.84□□□□□ -0.19
CCDC78-216ENST00000544996 MRPL39Q9NYK5 338 aaKnown RBP13.84□□□□□ -0.19
CCDC78-216ENST00000544996 B3GAT1Q9P2W7 334 aa13.84□□□□□ -0.19
CCDC78-216ENST00000544996 RCE1Q9Y256 329 aa13.84□□□□□ -0.19
CCDC78-216ENST00000544996 ARL2BPQ9Y2Y0 163 aa13.84□□□□□ -0.19
CCDC78-216ENST00000544996 CCDC168Q8NDH2 2452 aa13.83□□□□□ -0.2
CCDC78-216ENST00000544996 NME4O00746 187 aa13.83□□□□□ -0.2
CCDC78-216ENST00000544996 SLC43A1O75387 559 aa13.83□□□□□ -0.2
CCDC78-216ENST00000544996 OR6A2O95222 327 aa13.83□□□□□ -0.2
CCDC78-216ENST00000544996 IFNA8P32881 189 aa13.83□□□□□ -0.2
CCDC78-216ENST00000544996 OR1E2P47887 323 aa13.83□□□□□ -0.2
CCDC78-216ENST00000544996 BSPH1Q075Z2 132 aa13.83□□□□□ -0.2
CCDC78-216ENST00000544996 C1QTNF12Q5T7M4 302 aa13.83□□□□□ -0.2
CCDC78-216ENST00000544996 C8orf82Q6P1X6 216 aaPredicted RBP13.83□□□□□ -0.2
CCDC78-216ENST00000544996 KLHL17Q6TDP4 642 aa13.83□□□□□ -0.2
CCDC78-216ENST00000544996 C17orf78Q8N4C9 275 aa13.83□□□□□ -0.2
CCDC78-216ENST00000544996 MOGAT1Q96PD6 335 aa13.83□□□□□ -0.2
CCDC78-216ENST00000544996 LRRC37BQ96QE4 947 aa13.83□□□□□ -0.2
CCDC78-216ENST00000544996 MS4A18H0YCH9 400 aa13.82□□□□□ -0.2
CCDC78-216ENST00000544996 CXCR6O00574 342 aa13.82□□□□□ -0.2
CCDC78-216ENST00000544996 HS3ST1O14792 307 aa13.82□□□□□ -0.2
CCDC78-216ENST00000544996 DCTN3O75935 186 aa13.82□□□□□ -0.2
CCDC78-216ENST00000544996 OR5F1O95221 314 aa13.82□□□□□ -0.2
CCDC78-216ENST00000544996 LYPD3O95274 346 aa13.82□□□□□ -0.2
CCDC78-216ENST00000544996 PLAUP00749 431 aa13.82□□□□□ -0.2
CCDC78-216ENST00000544996 THY1P04216 161 aa13.82□□□□□ -0.2
CCDC78-216ENST00000544996 CDH2P19022 906 aaPredicted RBP13.82□□□□□ -0.2
CCDC78-216ENST00000544996 TNFRSF1BP20333 461 aa13.82□□□□□ -0.2
CCDC78-216ENST00000544996 AHCYP23526 432 aa13.82□□□□□ -0.2
CCDC78-216ENST00000544996 GSK3BP49841 420 aa13.82□□□□□ -0.2
CCDC78-216ENST00000544996 FOXG1P55316 489 aaPredicted RBP13.82□□□□□ -0.2
CCDC78-216ENST00000544996 PSME3P61289 254 aa13.82□□□□□ -0.2
CCDC78-216ENST00000544996 LTBQ06643 244 aa13.82□□□□□ -0.2
CCDC78-216ENST00000544996 PUDPQ08623 228 aa13.82□□□□□ -0.2
CCDC78-216ENST00000544996 MS4A18Q3C1V0 323 aa13.82□□□□□ -0.2
CCDC78-216ENST00000544996 HMBOX1Q6NT76 420 aa13.82□□□□□ -0.2
CCDC78-216ENST00000544996 KLHL24Q6TFL4 600 aa13.82□□□□□ -0.2
CCDC78-216ENST00000544996 SEZ6L2Q6UXD5 910 aa13.82□□□□□ -0.2
CCDC78-216ENST00000544996 TMEM108Q6UXF1 575 aa13.82□□□□□ -0.2
CCDC78-216ENST00000544996 WDR88Q6ZMY6 472 aa13.82□□□□□ -0.2
CCDC78-216ENST00000544996 PIGWQ7Z7B1 504 aa13.82□□□□□ -0.2
CCDC78-216ENST00000544996 GPR137CQ8N3F9 429 aa13.82□□□□□ -0.2
CCDC78-216ENST00000544996 OR5J2Q8NH18 312 aa13.82□□□□□ -0.2
CCDC78-216ENST00000544996 AKAP1Q92667 903 aaKnown RBP eCLIP13.82□□□□□ -0.2
CCDC78-216ENST00000544996 CCL19Q99731 98 aa13.82□□□□□ -0.2
CCDC78-216ENST00000544996 PIP5K1AQ99755 562 aa13.82□□□□□ -0.2
CCDC78-216ENST00000544996 KCTD14Q9BQ13 255 aaPredicted RBP13.82□□□□□ -0.2
CCDC78-216ENST00000544996 ZNF426Q9BUY5 554 aa13.82□□□□□ -0.2
CCDC78-216ENST00000544996 LINC00470Q9BZP3 86 aa13.82□□□□□ -0.2
CCDC78-216ENST00000544996 AMBRA1Q9C0C7 1298 aa13.82□□□□□ -0.2
CCDC78-216ENST00000544996 SPAG4Q9NPE6 437 aa13.82□□□□□ -0.2
CCDC78-216ENST00000544996 NANSQ9NR45 359 aa13.82□□□□□ -0.2
CCDC78-216ENST00000544996 RIMS3Q9UJD0 308 aa13.82□□□□□ -0.2
CCDC78-216ENST00000544996 AMDHD2Q9Y303 409 aa13.82□□□□□ -0.2
CCDC78-216ENST00000544996 NOX1Q9Y5S8 564 aa13.82□□□□□ -0.2
CCDC78-216ENST00000544996 MAGED1Q9Y5V3 778 aaPredicted RBP13.82□□□□□ -0.2
CCDC78-216ENST00000544996 SLC25A15Q9Y619 301 aa13.82□□□□□ -0.2
CCDC78-216ENST00000544996 ABCA4P78363 2273 aa13.81□□□□□ -0.2
CCDC78-216ENST00000544996 DPRXA6NFQ7 191 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms