RNA–Protein interactions for RNA: ENST00000544725.5

COPS7A-220, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 5

Gene COPS7A, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-220ENST00000544725 GSNP06396 782 aa12.54□□□□□ -0.4
COPS7A-220ENST00000544725 CHRM4P08173 479 aa12.54□□□□□ -0.4
COPS7A-220ENST00000544725 CRHR1P34998 444 aa12.54□□□□□ -0.4
COPS7A-220ENST00000544725 P2RY4P51582 365 aa12.54□□□□□ -0.4
COPS7A-220ENST00000544725 FUT5Q11128 374 aa12.54□□□□□ -0.4
COPS7A-220ENST00000544725 GNA13Q14344 377 aa12.54□□□□□ -0.4
COPS7A-220ENST00000544725 XKR7Q5GH72 579 aa12.54□□□□□ -0.4
COPS7A-220ENST00000544725 MDP1Q86V88 176 aa12.54□□□□□ -0.4
COPS7A-220ENST00000544725 LSRQ86X29 649 aaPredicted RBP12.54□□□□□ -0.4
COPS7A-220ENST00000544725 EPHX4Q8IUS5 362 aa12.54□□□□□ -0.4
COPS7A-220ENST00000544725 OR4M2Q8NGB6 313 aa12.54□□□□□ -0.4
COPS7A-220ENST00000544725 OR4A15Q8NGL6 344 aa12.54□□□□□ -0.4
COPS7A-220ENST00000544725 NANPQ8TBE9 248 aa12.54□□□□□ -0.4
COPS7A-220ENST00000544725 TMPRSS13Q9BYE2 586 aa12.54□□□□□ -0.4
COPS7A-220ENST00000544725 NOX1Q9Y5S8 564 aa12.54□□□□□ -0.4
COPS7A-220ENST00000544725 RNASET2O00584 256 aaKnown RBP12.53□□□□□ -0.4
COPS7A-220ENST00000544725 COPEO14579 308 aa12.53□□□□□ -0.4
COPS7A-220ENST00000544725 TRIM13O60858 407 aa12.53□□□□□ -0.4
COPS7A-220ENST00000544725 MPZL1O95297 269 aa12.53□□□□□ -0.4
COPS7A-220ENST00000544725 UQCRC2P22695 453 aa12.53□□□□□ -0.4
COPS7A-220ENST00000544725 FPR2P25090 351 aa12.53□□□□□ -0.4
COPS7A-220ENST00000544725 ALDH3B1P43353 468 aa12.53□□□□□ -0.4
COPS7A-220ENST00000544725 CAPZA2P47755 286 aa12.53□□□□□ -0.4
COPS7A-220ENST00000544725 EPS8Q12929 822 aa12.53□□□□□ -0.4
COPS7A-220ENST00000544725 PRAMEF8Q5VWM4 474 aa12.53□□□□□ -0.4
COPS7A-220ENST00000544725 PRAMEF7Q5VXH5 474 aa12.53□□□□□ -0.4
COPS7A-220ENST00000544725 OR4F3Q6IEY1 312 aa12.53□□□□□ -0.4
COPS7A-220ENST00000544725 YIPF5Q969M3 257 aa12.53□□□□□ -0.4
COPS7A-220ENST00000544725 ZNF665Q9H7R5 613 aa12.53□□□□□ -0.4
COPS7A-220ENST00000544725 PRDM4Q9UKN5 801 aa12.53□□□□□ -0.4
COPS7A-220ENST00000544725 RCE1Q9Y256 329 aa12.53□□□□□ -0.4
COPS7A-220ENST00000544725 NOTCH1P46531 2555 aa12.53□□□□□ -0.4
COPS7A-220ENST00000544725 ZNF503-AS2A6NEH8 195 aa12.52□□□□□ -0.41
COPS7A-220ENST00000544725 AGAP5A6NIR3 686 aa12.52□□□□□ -0.41
COPS7A-220ENST00000544725 A8MVM7 634 aa12.52□□□□□ -0.41
COPS7A-220ENST00000544725 FRS3O43559 492 aa12.52□□□□□ -0.41
COPS7A-220ENST00000544725 SLC43A1O75387 559 aa12.52□□□□□ -0.41
COPS7A-220ENST00000544725 CHRNGP07510 517 aa12.52□□□□□ -0.41
COPS7A-220ENST00000544725 GLRXP35754 106 aa12.52□□□□□ -0.41
COPS7A-220ENST00000544725 SEC24CP53992 1094 aa12.52□□□□□ -0.41
COPS7A-220ENST00000544725 RPS23P62266 143 aaKnown RBP12.52□□□□□ -0.41
COPS7A-220ENST00000544725 PCLAFQ15004 111 aa12.52□□□□□ -0.41
COPS7A-220ENST00000544725 MSMPQ1L6U9 139 aa12.52□□□□□ -0.41
COPS7A-220ENST00000544725 RBMS3Q6XE24 437 aaKnown RBP12.52□□□□□ -0.41
COPS7A-220ENST00000544725 GSPT2Q8IYD1 628 aaKnown RBP12.52□□□□□ -0.41
COPS7A-220ENST00000544725 ZNF440Q8IYI8 595 aa12.52□□□□□ -0.41
COPS7A-220ENST00000544725 GPR137CQ8N3F9 429 aa12.52□□□□□ -0.41
COPS7A-220ENST00000544725 RAB39BQ96DA2 213 aa12.52□□□□□ -0.41
COPS7A-220ENST00000544725 SYT3Q9BQG1 590 aa12.52□□□□□ -0.41
COPS7A-220ENST00000544725 ZNF385DQ9H6B1 395 aa12.52□□□□□ -0.41
COPS7A-220ENST00000544725 GPR35Q9HC97 309 aa12.52□□□□□ -0.41
COPS7A-220ENST00000544725 PPIAL4AQ9Y536 164 aa12.52□□□□□ -0.41
COPS7A-220ENST00000544725 CORINQ9Y5Q5 1042 aa12.52□□□□□ -0.41
COPS7A-220ENST00000544725 PLPP2O43688 288 aa12.51□□□□□ -0.41
COPS7A-220ENST00000544725 NPHS1O60500 1241 aa12.51□□□□□ -0.41
COPS7A-220ENST00000544725 RP2O75695 350 aa12.51□□□□□ -0.41
COPS7A-220ENST00000544725 ZNF432O94892 652 aa12.51□□□□□ -0.41
COPS7A-220ENST00000544725 TFPTP0C1Z6 253 aa12.51□□□□□ -0.41
COPS7A-220ENST00000544725 ARAFP10398 606 aa12.51□□□□□ -0.41
COPS7A-220ENST00000544725 G6PDP11413 515 aa12.51□□□□□ -0.41
COPS7A-220ENST00000544725 IL7RP16871 459 aa12.51□□□□□ -0.41
COPS7A-220ENST00000544725 ZNF43P17038 809 aa12.51□□□□□ -0.41
COPS7A-220ENST00000544725 ADRA2CP18825 462 aa12.51□□□□□ -0.41
COPS7A-220ENST00000544725 CLDN8P56748 225 aa12.51□□□□□ -0.41
COPS7A-220ENST00000544725 CLDN17P56750 224 aa12.51□□□□□ -0.41
COPS7A-220ENST00000544725 MAD2L1Q13257 205 aaPredicted RBP12.51□□□□□ -0.41
COPS7A-220ENST00000544725 MAD2L1BPQ15013 274 aaPredicted RBP12.51□□□□□ -0.41
COPS7A-220ENST00000544725 CEACAM16Q2WEN9 425 aa12.51□□□□□ -0.41
COPS7A-220ENST00000544725 TRMT5Q32P41 509 aaKnown RBP12.51□□□□□ -0.41
COPS7A-220ENST00000544725 GKAP1Q5VSY0 366 aaPredicted RBP12.51□□□□□ -0.41
COPS7A-220ENST00000544725 C1orf140Q5VVS0 124 aa12.51□□□□□ -0.41
COPS7A-220ENST00000544725 DCAF12L2Q5VW00 463 aa12.51□□□□□ -0.41
COPS7A-220ENST00000544725 SAXO2Q658L1 398 aa12.51□□□□□ -0.41
COPS7A-220ENST00000544725 ZCCHC23Q6ZST2 131 aa12.51□□□□□ -0.41
COPS7A-220ENST00000544725 AGR3Q8TD06 166 aa12.51□□□□□ -0.41
COPS7A-220ENST00000544725 TUBGCP3Q96CW5 907 aa12.51□□□□□ -0.41
COPS7A-220ENST00000544725 C3orf30Q96M34 536 aa12.51□□□□□ -0.41
COPS7A-220ENST00000544725 TRNT1Q96Q11 434 aaKnown RBP12.51□□□□□ -0.41
COPS7A-220ENST00000544725 DPY30Q9C005 99 aa12.51□□□□□ -0.41
COPS7A-220ENST00000544725 ZNF346Q9UL40 294 aaKnown RBP12.51□□□□□ -0.41
COPS7A-220ENST00000544725 A0A096LPI6 279 aa12.5□□□□□ -0.41
COPS7A-220ENST00000544725 PRAMEF27A3QJZ7 478 aa12.5□□□□□ -0.41
COPS7A-220ENST00000544725 NCR1O76036 304 aa12.5□□□□□ -0.41
COPS7A-220ENST00000544725 PRSS23O95084 383 aa12.5□□□□□ -0.41
COPS7A-220ENST00000544725 CPSF4O95639 269 aaKnown RBP12.5□□□□□ -0.41
COPS7A-220ENST00000544725 DBIP07108 87 aaKnown RBP12.5□□□□□ -0.41
COPS7A-220ENST00000544725 GATA3P23771 443 aa12.5□□□□□ -0.41
COPS7A-220ENST00000544725 CHI3L1P36222 383 aaPredicted RBP12.5□□□□□ -0.41
COPS7A-220ENST00000544725 COPZ1P61923 177 aa12.5□□□□□ -0.41
COPS7A-220ENST00000544725 GALK2Q01415 458 aa12.5□□□□□ -0.41
COPS7A-220ENST00000544725 ZP4Q12836 540 aa12.5□□□□□ -0.41
COPS7A-220ENST00000544725 BNIP2Q12982 314 aa12.5□□□□□ -0.41
COPS7A-220ENST00000544725 WHAMMP3Q1A5X7 153 aa12.5□□□□□ -0.41
COPS7A-220ENST00000544725 MMEL1Q495T6 779 aa12.5□□□□□ -0.41
COPS7A-220ENST00000544725 MRPL2Q5T653 305 aaKnown RBP12.5□□□□□ -0.41
COPS7A-220ENST00000544725 LRP11Q86VZ4 500 aa12.5□□□□□ -0.41
COPS7A-220ENST00000544725 CADM2Q8N3J6 435 aa12.5□□□□□ -0.41
COPS7A-220ENST00000544725 NOA1Q8NC60 698 aaKnown RBP12.5□□□□□ -0.41
COPS7A-220ENST00000544725 PIK3C3Q8NEB9 887 aa12.5□□□□□ -0.41
COPS7A-220ENST00000544725 VPS37AQ8NEZ2 397 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms