RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 TM4SF18Q96CE8 201 aa3.49□□□□□ -1.85
SNHG1-220ENST00000544550 RBBP8Q99708 897 aa3.49□□□□□ -1.85
SNHG1-220ENST00000544550 NPAS1Q99742 590 aa3.49□□□□□ -1.85
SNHG1-220ENST00000544550 LMF2Q9BU23 707 aaKnown RBP3.49□□□□□ -1.85
SNHG1-220ENST00000544550 C1QTNF5Q9BXJ0 243 aa3.49□□□□□ -1.85
SNHG1-220ENST00000544550 MRPL1Q9BYD6 325 aaKnown RBP3.49□□□□□ -1.85
SNHG1-220ENST00000544550 TPK1Q9H3S4 243 aa3.49□□□□□ -1.85
SNHG1-220ENST00000544550 RHOJQ9H4E5 214 aa3.49□□□□□ -1.85
SNHG1-220ENST00000544550 COQ10BQ9H8M1 238 aa3.49□□□□□ -1.85
SNHG1-220ENST00000544550 ANKZF1Q9H8Y5 726 aa3.49□□□□□ -1.85
SNHG1-220ENST00000544550 ANKRA2Q9H9E1 313 aa3.49□□□□□ -1.85
SNHG1-220ENST00000544550 SERINC1Q9NRX5 453 aa3.49□□□□□ -1.85
SNHG1-220ENST00000544550 ZNF275Q9NSD4 429 aaPredicted RBP3.49□□□□□ -1.85
SNHG1-220ENST00000544550 TBC1D23Q9NUY8 699 aa3.49□□□□□ -1.85
SNHG1-220ENST00000544550 DDX18Q9NVP1 670 aaKnown RBP3.49□□□□□ -1.85
SNHG1-220ENST00000544550 DKK2Q9UBU2 259 aa3.49□□□□□ -1.85
SNHG1-220ENST00000544550 MTO1Q9Y2Z2 717 aaKnown RBP3.49□□□□□ -1.85
SNHG1-220ENST00000544550 TENM1Q9UKZ4 2725 aa3.48□□□□□ -1.85
SNHG1-220ENST00000544550 SH3PXD2BA1X283 911 aa3.48□□□□□ -1.85
SNHG1-220ENST00000544550 CCDC151A5D8V7 595 aa3.48□□□□□ -1.85
SNHG1-220ENST00000544550 LYNX1G3V0Z9 82 aa3.48□□□□□ -1.85
SNHG1-220ENST00000544550 G3V4G9 280 aa3.48□□□□□ -1.85
SNHG1-220ENST00000544550 SULT2B1O00204 365 aa3.48□□□□□ -1.85
SNHG1-220ENST00000544550 RNASET2O00584 256 aaKnown RBP3.48□□□□□ -1.85
SNHG1-220ENST00000544550 DNPH1O43598 174 aa3.48□□□□□ -1.85
SNHG1-220ENST00000544550 SYNGR3O43761 229 aa3.48□□□□□ -1.85
SNHG1-220ENST00000544550 NCR1O76036 304 aa3.48□□□□□ -1.85
SNHG1-220ENST00000544550 SEC14L2O76054 403 aa3.48□□□□□ -1.85
SNHG1-220ENST00000544550 INMTO95050 263 aa3.48□□□□□ -1.85
SNHG1-220ENST00000544550 WISP3O95389 354 aaPredicted RBP3.48□□□□□ -1.85
SNHG1-220ENST00000544550 FGGP02679 453 aa3.48□□□□□ -1.85
SNHG1-220ENST00000544550 CSF1P09603 554 aa3.48□□□□□ -1.85
SNHG1-220ENST00000544550 IFI6P09912 130 aa3.48□□□□□ -1.85
SNHG1-220ENST00000544550 ALOX5P09917 674 aa3.48□□□□□ -1.85
SNHG1-220ENST00000544550 FREM3P0C091 2139 aa3.48□□□□□ -1.85
SNHG1-220ENST00000544550 CECR9P0C854 216 aa3.48□□□□□ -1.85
SNHG1-220ENST00000544550 LYNX1P0DP58 116 aa3.48□□□□□ -1.85
SNHG1-220ENST00000544550 SELEP16581 610 aa3.48□□□□□ -1.85
SNHG1-220ENST00000544550 STMN1P16949 149 aa3.48□□□□□ -1.85
SNHG1-220ENST00000544550 OMGP23515 440 aa3.48□□□□□ -1.85
SNHG1-220ENST00000544550 COL8A2P25067 703 aa3.48□□□□□ -1.85
SNHG1-220ENST00000544550 FKBP2P26885 142 aaKnown RBP3.48□□□□□ -1.85
SNHG1-220ENST00000544550 GABRA3P34903 492 aa3.48□□□□□ -1.85
SNHG1-220ENST00000544550 THBS4P35443 961 aa3.48□□□□□ -1.85
SNHG1-220ENST00000544550 ARL1P40616 181 aaPredicted RBP3.48□□□□□ -1.85
SNHG1-220ENST00000544550 MAGEA8P43361 318 aa3.48□□□□□ -1.85
SNHG1-220ENST00000544550 P2RX1P51575 399 aa3.48□□□□□ -1.85
SNHG1-220ENST00000544550 RPS7P62081 194 aaKnown RBP3.48□□□□□ -1.85
SNHG1-220ENST00000544550 SLC25A3Q00325 362 aa3.48□□□□□ -1.85
SNHG1-220ENST00000544550 COL10A1Q03692 680 aa3.48□□□□□ -1.85
SNHG1-220ENST00000544550 SRSF4Q08170 494 aaKnown RBP3.48□□□□□ -1.85
SNHG1-220ENST00000544550 ELFN2Q5R3F8 820 aa3.48□□□□□ -1.85
SNHG1-220ENST00000544550 OTUD3Q5T2D3 398 aaPredicted RBP3.48□□□□□ -1.85
SNHG1-220ENST00000544550 C9orf135Q5VTT2 229 aa3.48□□□□□ -1.85
SNHG1-220ENST00000544550 FRG2Q64ET8 278 aa3.48□□□□□ -1.85
SNHG1-220ENST00000544550 FAM180BQ6P0A1 224 aa3.48□□□□□ -1.85
SNHG1-220ENST00000544550 PGBD2Q6P3X8 592 aa3.48□□□□□ -1.85
SNHG1-220ENST00000544550 CASP12Q6UXS9 341 aa3.48□□□□□ -1.85
SNHG1-220ENST00000544550 APOOLQ6UXV4 268 aa3.48□□□□□ -1.85
SNHG1-220ENST00000544550 TMPPEQ6ZT21 453 aa3.48□□□□□ -1.85
SNHG1-220ENST00000544550 COMMD6Q7Z4G1 85 aa3.48□□□□□ -1.85
SNHG1-220ENST00000544550 CDK20Q8IZL9 346 aa3.48□□□□□ -1.85
SNHG1-220ENST00000544550 ZCCHC24Q8N2G6 241 aaKnown RBP3.48□□□□□ -1.85
SNHG1-220ENST00000544550 OR2L13Q8N349 312 aa3.48□□□□□ -1.85
SNHG1-220ENST00000544550 POMGNT2Q8NAT1 580 aa3.48□□□□□ -1.85
SNHG1-220ENST00000544550 ZNF527Q8NB42 609 aa3.48□□□□□ -1.85
SNHG1-220ENST00000544550 ATP6V1C2Q8NEY4 427 aa3.48□□□□□ -1.85
SNHG1-220ENST00000544550 OR6Y1Q8NGX8 325 aa3.48□□□□□ -1.85
SNHG1-220ENST00000544550 IL17DQ8TAD2 202 aa3.48□□□□□ -1.85
SNHG1-220ENST00000544550 FAM110DQ8TAY7 271 aaPredicted RBP3.48□□□□□ -1.85
SNHG1-220ENST00000544550 GPR151Q8TDV0 419 aa3.48□□□□□ -1.85
SNHG1-220ENST00000544550 ST7LQ8TDW4 575 aa3.48□□□□□ -1.85
SNHG1-220ENST00000544550 GRK7Q8WTQ7 553 aa3.48□□□□□ -1.85
SNHG1-220ENST00000544550 SLC25A43Q8WUT9 341 aaPredicted RBP3.48□□□□□ -1.85
SNHG1-220ENST00000544550 ATP6V1E2Q96A05 226 aa3.48□□□□□ -1.85
SNHG1-220ENST00000544550 EXOSC8Q96B26 276 aaKnown RBP3.48□□□□□ -1.85
SNHG1-220ENST00000544550 LRRC39Q96DD0 335 aa3.48□□□□□ -1.85
SNHG1-220ENST00000544550 TIMD4Q96H15 378 aa3.48□□□□□ -1.85
SNHG1-220ENST00000544550 SH3YL1Q96HL8 342 aaPredicted RBP3.48□□□□□ -1.85
SNHG1-220ENST00000544550 C1orf147Q96MC9 270 aaPredicted RBP3.48□□□□□ -1.85
SNHG1-220ENST00000544550 C8orf49Q96NF6 230 aa3.48□□□□□ -1.85
SNHG1-220ENST00000544550 FRG2BQ96QU4 278 aa3.48□□□□□ -1.85
SNHG1-220ENST00000544550 OR5B2Q96R09 309 aa3.48□□□□□ -1.85
SNHG1-220ENST00000544550 C1QTNF3Q9BXJ4 246 aa3.48□□□□□ -1.85
SNHG1-220ENST00000544550 KRTAP3-1Q9BYR8 98 aa3.48□□□□□ -1.85
SNHG1-220ENST00000544550 IQCGQ9H095 443 aaKnown RBP3.48□□□□□ -1.85
SNHG1-220ENST00000544550 ELOVL6Q9H5J4 265 aa3.48□□□□□ -1.85
SNHG1-220ENST00000544550 ZNF385DQ9H6B1 395 aa3.48□□□□□ -1.85
SNHG1-220ENST00000544550 ALG9Q9H6U8 611 aa3.48□□□□□ -1.85
SNHG1-220ENST00000544550 PPCSQ9HAB8 311 aa3.48□□□□□ -1.85
SNHG1-220ENST00000544550 BRF2Q9HAW0 419 aa3.48□□□□□ -1.85
SNHG1-220ENST00000544550 NMRAL1Q9HBL8 299 aa3.48□□□□□ -1.85
SNHG1-220ENST00000544550 AKIP1Q9NQ31 210 aa3.48□□□□□ -1.85
SNHG1-220ENST00000544550 SLC35C2Q9NQQ7 365 aa3.48□□□□□ -1.85
SNHG1-220ENST00000544550 UBQLN4Q9NRR5 601 aa3.48□□□□□ -1.85
SNHG1-220ENST00000544550 NECAP2Q9NVZ3 263 aa3.48□□□□□ -1.85
SNHG1-220ENST00000544550 TMEM45AQ9NWC5 275 aa3.48□□□□□ -1.85
SNHG1-220ENST00000544550 TXNDC16Q9P2K2 825 aa3.48□□□□□ -1.85
SNHG1-220ENST00000544550 CRNNQ9UBG3 495 aaPredicted RBP3.48□□□□□ -1.85
SNHG1-220ENST00000544550 OPN4Q9UHM6 478 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms