RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 A0A1W2PNV4 684 aa12.89□□□□□ -0.35
TNFRSF1A-216ENST00000543995 ZNF716A6NP11 495 aa12.89□□□□□ -0.35
TNFRSF1A-216ENST00000543995 C11orf98E9PRG8 122 aa12.89□□□□□ -0.35
TNFRSF1A-216ENST00000543995 DVL2O14641 736 aa12.89□□□□□ -0.35
TNFRSF1A-216ENST00000543995 FZD7O75084 574 aa12.89□□□□□ -0.35
TNFRSF1A-216ENST00000543995 SS18L1O75177 396 aaPredicted RBP12.89□□□□□ -0.35
TNFRSF1A-216ENST00000543995 LDLRP01130 860 aa12.89□□□□□ -0.35
TNFRSF1A-216ENST00000543995 CRHP06850 196 aa12.89□□□□□ -0.35
TNFRSF1A-216ENST00000543995 YES1P07947 543 aa12.89□□□□□ -0.35
TNFRSF1A-216ENST00000543995 ASAH2BP0C7U1 165 aa12.89□□□□□ -0.35
TNFRSF1A-216ENST00000543995 ZNF43P17038 809 aa12.89□□□□□ -0.35
TNFRSF1A-216ENST00000543995 AGTR1P30556 359 aa12.89□□□□□ -0.35
TNFRSF1A-216ENST00000543995 CHRNB4P30926 498 aa12.89□□□□□ -0.35
TNFRSF1A-216ENST00000543995 DNAJA1P31689 397 aaKnown RBP12.89□□□□□ -0.35
TNFRSF1A-216ENST00000543995 P2RY4P51582 365 aa12.89□□□□□ -0.35
TNFRSF1A-216ENST00000543995 ARHGDIAP52565 204 aa12.89□□□□□ -0.35
TNFRSF1A-216ENST00000543995 IST1P53990 364 aa12.89□□□□□ -0.35
TNFRSF1A-216ENST00000543995 PUDPQ08623 228 aa12.89□□□□□ -0.35
TNFRSF1A-216ENST00000543995 C1DQ13901 141 aaKnown RBP12.89□□□□□ -0.35
TNFRSF1A-216ENST00000543995 GK3PQ14409 553 aa12.89□□□□□ -0.35
TNFRSF1A-216ENST00000543995 PDK3Q15120 406 aa12.89□□□□□ -0.35
TNFRSF1A-216ENST00000543995 FAM214BQ7L5A3 538 aa12.89□□□□□ -0.35
TNFRSF1A-216ENST00000543995 OAFQ86UD1 273 aa12.89□□□□□ -0.35
TNFRSF1A-216ENST00000543995 LINC00471Q8N535 108 aa12.89□□□□□ -0.35
TNFRSF1A-216ENST00000543995 ADPRHL1Q8NDY3 354 aa12.89□□□□□ -0.35
TNFRSF1A-216ENST00000543995 CA5BP1Q8WTZ4 195 aa12.89□□□□□ -0.35
TNFRSF1A-216ENST00000543995 OXGR1Q96P68 337 aa12.89□□□□□ -0.35
TNFRSF1A-216ENST00000543995 TACO1Q9BSH4 297 aaKnown RBP12.89□□□□□ -0.35
TNFRSF1A-216ENST00000543995 SF3B5Q9BWJ5 86 aaKnown RBP12.89□□□□□ -0.35
TNFRSF1A-216ENST00000543995 SFXN3Q9BWM7 321 aa12.89□□□□□ -0.35
TNFRSF1A-216ENST00000543995 BCO1Q9HAY6 547 aa12.89□□□□□ -0.35
TNFRSF1A-216ENST00000543995 GP6Q9HCN6 339 aa12.89□□□□□ -0.35
TNFRSF1A-216ENST00000543995 ZNF629Q9UEG4 869 aaPredicted RBP12.89□□□□□ -0.35
TNFRSF1A-216ENST00000543995 RELNP78509 3460 aa12.89□□□□□ -0.35
TNFRSF1A-216ENST00000543995 DIDO1Q9BTC0 2240 aaKnown RBP12.89□□□□□ -0.35
TNFRSF1A-216ENST00000543995 HIVEP3Q5T1R4 2406 aa12.88□□□□□ -0.35
TNFRSF1A-216ENST00000543995 ZNF724A8MTY0 619 aa12.88□□□□□ -0.35
TNFRSF1A-216ENST00000543995 PLPP3O14495 311 aa12.88□□□□□ -0.35
TNFRSF1A-216ENST00000543995 GPR171O14626 319 aa12.88□□□□□ -0.35
TNFRSF1A-216ENST00000543995 SERPINI2O75830 405 aa12.88□□□□□ -0.35
TNFRSF1A-216ENST00000543995 KIR2DL2P43627 348 aaPredicted RBP12.88□□□□□ -0.35
TNFRSF1A-216ENST00000543995 OMPP47874 163 aa12.88□□□□□ -0.35
TNFRSF1A-216ENST00000543995 SLC9A3P48764 834 aa12.88□□□□□ -0.35
TNFRSF1A-216ENST00000543995 SLC16A1P53985 500 aa12.88□□□□□ -0.35
TNFRSF1A-216ENST00000543995 SLC17A1Q14916 467 aa12.88□□□□□ -0.35
TNFRSF1A-216ENST00000543995 ATP6AP1Q15904 470 aa12.88□□□□□ -0.35
TNFRSF1A-216ENST00000543995 MICAQ29983 383 aa12.88□□□□□ -0.35
TNFRSF1A-216ENST00000543995 EEF1A1P5Q5VTE0 462 aa12.88□□□□□ -0.35
TNFRSF1A-216ENST00000543995 TMPRSS11FQ6ZWK6 438 aa12.88□□□□□ -0.35
TNFRSF1A-216ENST00000543995 OR9K2Q8NGE7 335 aa12.88□□□□□ -0.35
TNFRSF1A-216ENST00000543995 OR9Q2Q8NGE9 314 aa12.88□□□□□ -0.35
TNFRSF1A-216ENST00000543995 LIPHQ8WWY8 451 aa12.88□□□□□ -0.35
TNFRSF1A-216ENST00000543995 LRTOMTQ8WZ04 291 aa12.88□□□□□ -0.35
TNFRSF1A-216ENST00000543995 BDH2Q9BUT1 245 aa12.88□□□□□ -0.35
TNFRSF1A-216ENST00000543995 C12orf49Q9H741 205 aa12.88□□□□□ -0.35
TNFRSF1A-216ENST00000543995 NOSIPQ9Y314 301 aaKnown RBP12.88□□□□□ -0.35
TNFRSF1A-216ENST00000543995 INTS1Q8N201 2190 aaKnown RBP12.88□□□□□ -0.35
TNFRSF1A-216ENST00000543995 TRAV27A0A087WT01 109 aa12.88□□□□□ -0.35
TNFRSF1A-216ENST00000543995 MS4A18H0YCH9 400 aa12.88□□□□□ -0.35
TNFRSF1A-216ENST00000543995 CDC42EP2O14613 210 aa12.88□□□□□ -0.35
TNFRSF1A-216ENST00000543995 RNF13O43567 381 aa12.88□□□□□ -0.35
TNFRSF1A-216ENST00000543995 TNFSF13O75888 250 aa12.88□□□□□ -0.35
TNFRSF1A-216ENST00000543995 SMNDC1O75940 238 aaKnown RBP eCLIP12.88□□□□□ -0.35
TNFRSF1A-216ENST00000543995 IL18BPO95998 194 aa12.88□□□□□ -0.35
TNFRSF1A-216ENST00000543995 POU4F3Q15319 338 aa12.88□□□□□ -0.35
TNFRSF1A-216ENST00000543995 GUSBP1Q15486 140 aa12.88□□□□□ -0.35
TNFRSF1A-216ENST00000543995 MS4A18Q3C1V0 323 aa12.88□□□□□ -0.35
TNFRSF1A-216ENST00000543995 PGBD2Q6P3X8 592 aa12.88□□□□□ -0.35
TNFRSF1A-216ENST00000543995 VWA1Q6PCB0 445 aa12.88□□□□□ -0.35
TNFRSF1A-216ENST00000543995 XKRXQ6PP77 449 aa12.88□□□□□ -0.35
TNFRSF1A-216ENST00000543995 ZER1Q7Z7L7 766 aa12.88□□□□□ -0.35
TNFRSF1A-216ENST00000543995 GALNT5Q7Z7M9 940 aa12.88□□□□□ -0.35
TNFRSF1A-216ENST00000543995 AMIGO2Q86SJ2 522 aa12.88□□□□□ -0.35
TNFRSF1A-216ENST00000543995 LIX1LQ8IVB5 337 aa12.88□□□□□ -0.35
TNFRSF1A-216ENST00000543995 UEVLDQ8IX04 471 aa12.88□□□□□ -0.35
TNFRSF1A-216ENST00000543995 ZNF808Q8N4W9 903 aaPredicted RBP12.88□□□□□ -0.35
TNFRSF1A-216ENST00000543995 AQP11Q8NBQ7 271 aa12.88□□□□□ -0.35
TNFRSF1A-216ENST00000543995 OR10G2Q8NGC3 310 aa12.88□□□□□ -0.35
TNFRSF1A-216ENST00000543995 OR13C2Q8NGS9 318 aa12.88□□□□□ -0.35
TNFRSF1A-216ENST00000543995 OR51A7Q8NH64 312 aa12.88□□□□□ -0.35
TNFRSF1A-216ENST00000543995 GNPDA2Q8TDQ7 276 aa12.88□□□□□ -0.35
TNFRSF1A-216ENST00000543995 GIPC3Q8TF64 312 aa12.88□□□□□ -0.35
TNFRSF1A-216ENST00000543995 S100A14Q9HCY8 104 aa12.88□□□□□ -0.35
TNFRSF1A-216ENST00000543995 TAS2R5Q9NYW4 299 aa12.88□□□□□ -0.35
TNFRSF1A-216ENST00000543995 PDP1Q9P0J1 537 aaPredicted RBP12.88□□□□□ -0.35
TNFRSF1A-216ENST00000543995 B3GAT1Q9P2W7 334 aa12.88□□□□□ -0.35
TNFRSF1A-216ENST00000543995 ING1Q9UK53 422 aaPredicted RBP12.88□□□□□ -0.35
TNFRSF1A-216ENST00000543995 PROCRQ9UNN8 238 aa12.88□□□□□ -0.35
TNFRSF1A-216ENST00000543995 FLVCR1Q9Y5Y0 555 aa12.88□□□□□ -0.35
TNFRSF1A-216ENST00000543995 IGKV3D-15A0A087WSY6 115 aa12.87□□□□□ -0.35
TNFRSF1A-216ENST00000543995 UNC119BA6NIH7 251 aa12.87□□□□□ -0.35
TNFRSF1A-216ENST00000543995 FAM90A27PA6NNH2 459 aa12.87□□□□□ -0.35
TNFRSF1A-216ENST00000543995 EEF1E1-BLOC1S5C9J1V9 151 aa12.87□□□□□ -0.35
TNFRSF1A-216ENST00000543995 EEF1E1O43324 174 aaKnown RBP12.87□□□□□ -0.35
TNFRSF1A-216ENST00000543995 HPRP00739 348 aa12.87□□□□□ -0.35
TNFRSF1A-216ENST00000543995 POU2F1P14859 743 aa12.87□□□□□ -0.35
TNFRSF1A-216ENST00000543995 AQP2P41181 271 aa12.87□□□□□ -0.35
TNFRSF1A-216ENST00000543995 POU3F1Q03052 451 aaPredicted RBP12.87□□□□□ -0.35
TNFRSF1A-216ENST00000543995 RPL18Q07020 188 aaKnown RBP12.87□□□□□ -0.35
TNFRSF1A-216ENST00000543995 SRSF1Q07955 248 aaKnown RBP eCLIP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms