RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 FLOT2Q14254 428 aa13.38□□□□□ -0.27
CD9-210ENST00000543916 POU4F3Q15319 338 aa13.38□□□□□ -0.27
CD9-210ENST00000543916 EXOC3L2Q2M3D2 409 aa13.38□□□□□ -0.27
CD9-210ENST00000543916 MS4A18Q3C1V0 323 aa13.38□□□□□ -0.27
CD9-210ENST00000543916 FGD3Q5JSP0 725 aa13.38□□□□□ -0.27
CD9-210ENST00000543916 SP5Q6BEB4 398 aaPredicted RBP13.38□□□□□ -0.27
CD9-210ENST00000543916 TBPL2Q6SJ96 375 aa13.38□□□□□ -0.27
CD9-210ENST00000543916 CREB3L2Q70SY1 520 aa13.38□□□□□ -0.27
CD9-210ENST00000543916 PIWIL3Q7Z3Z3 882 aaKnown RBP13.38□□□□□ -0.27
CD9-210ENST00000543916 MEX3DQ86XN8 651 aaKnown RBP13.38□□□□□ -0.27
CD9-210ENST00000543916 ADGRG5Q8IZF4 528 aa13.38□□□□□ -0.27
CD9-210ENST00000543916 SCAIQ8N9R8 606 aa13.38□□□□□ -0.27
CD9-210ENST00000543916 ACBD4Q8NC06 268 aa13.38□□□□□ -0.27
CD9-210ENST00000543916 OR5J2Q8NH18 312 aa13.38□□□□□ -0.27
CD9-210ENST00000543916 SLC7A13Q8TCU3 470 aa13.38□□□□□ -0.27
CD9-210ENST00000543916 ACOT11Q8WXI4 607 aaPredicted RBP13.38□□□□□ -0.27
CD9-210ENST00000543916 SGTBQ96EQ0 304 aa13.38□□□□□ -0.27
CD9-210ENST00000543916 ZNF385AQ96PM9 386 aaKnown RBP13.38□□□□□ -0.27
CD9-210ENST00000543916 FUZQ9BT04 418 aa13.38□□□□□ -0.27
CD9-210ENST00000543916 TRIM15Q9C019 465 aa13.38□□□□□ -0.27
CD9-210ENST00000543916 ANKRD19PQ9H560 264 aa13.38□□□□□ -0.27
CD9-210ENST00000543916 MAGIXQ9H6Y5 334 aa13.38□□□□□ -0.27
CD9-210ENST00000543916 NANSQ9NR45 359 aa13.38□□□□□ -0.27
CD9-210ENST00000543916 PRSS50Q9UI38 385 aa13.38□□□□□ -0.27
CD9-210ENST00000543916 ZNF229Q9UJW7 825 aa13.38□□□□□ -0.27
CD9-210ENST00000543916 TRBV4-1A0A0J9YWV2 114 aa13.37□□□□□ -0.27
CD9-210ENST00000543916 AQP12BA6NM10 295 aa13.37□□□□□ -0.27
CD9-210ENST00000543916 PLPP3O14495 311 aa13.37□□□□□ -0.27
CD9-210ENST00000543916 OR7A10O76100 309 aa13.37□□□□□ -0.27
CD9-210ENST00000543916 ASAH2BP0C7U1 165 aa13.37□□□□□ -0.27
CD9-210ENST00000543916 IFI30P13284 250 aa13.37□□□□□ -0.27
CD9-210ENST00000543916 FUT1P19526 365 aa13.37□□□□□ -0.27
CD9-210ENST00000543916 ERFP50548 548 aa13.37□□□□□ -0.27
CD9-210ENST00000543916 SPIBQ01892 262 aa13.37□□□□□ -0.27
CD9-210ENST00000543916 PMS2P3Q13401 168 aa13.37□□□□□ -0.27
CD9-210ENST00000543916 PODNL1Q6PEZ8 512 aa13.37□□□□□ -0.27
CD9-210ENST00000543916 ZNF730Q6ZMV8 503 aa13.37□□□□□ -0.27
CD9-210ENST00000543916 MBOAT2Q6ZWT7 520 aa13.37□□□□□ -0.27
CD9-210ENST00000543916 EPHX4Q8IUS5 362 aa13.37□□□□□ -0.27
CD9-210ENST00000543916 AQP12AQ8IXF9 295 aa13.37□□□□□ -0.27
CD9-210ENST00000543916 NRMQ8IXM6 262 aa13.37□□□□□ -0.27
CD9-210ENST00000543916 OR52J3Q8NH60 311 aa13.37□□□□□ -0.27
CD9-210ENST00000543916 TMEM45BQ96B21 275 aa13.37□□□□□ -0.27
CD9-210ENST00000543916 BPIFA2Q96DR5 249 aa13.37□□□□□ -0.27
CD9-210ENST00000543916 OXGR1Q96P68 337 aa13.37□□□□□ -0.27
CD9-210ENST00000543916 ENKD1Q9H0I2 346 aa13.37□□□□□ -0.27
CD9-210ENST00000543916 FOXD3Q9UJU5 478 aaPredicted RBP13.37□□□□□ -0.27
CD9-210ENST00000543916 SPTAN1Q13813 2472 aaKnown RBP13.37□□□□□ -0.27
CD9-210ENST00000543916 ADGRG4Q8IZF6 3080 aa13.37□□□□□ -0.27
CD9-210ENST00000543916 TRAF3IP2O43734 574 aaPredicted RBP13.36□□□□□ -0.27
CD9-210ENST00000543916 MRPL33O75394 65 aaKnown RBP13.36□□□□□ -0.27
CD9-210ENST00000543916 GADD45GO95257 159 aa13.36□□□□□ -0.27
CD9-210ENST00000543916 UMPSP11172 480 aa13.36□□□□□ -0.27
CD9-210ENST00000543916 HLA-DOBP13765 273 aa13.36□□□□□ -0.27
CD9-210ENST00000543916 MAKP20794 623 aa13.36□□□□□ -0.27
CD9-210ENST00000543916 RRM2P31350 389 aa13.36□□□□□ -0.27
CD9-210ENST00000543916 CCKARP32238 428 aa13.36□□□□□ -0.27
CD9-210ENST00000543916 CD79BP40259 229 aa13.36□□□□□ -0.27
CD9-210ENST00000543916 IL1RL1Q01638 556 aa13.36□□□□□ -0.27
CD9-210ENST00000543916 PRKCDQ05655 676 aa13.36□□□□□ -0.27
CD9-210ENST00000543916 CHRNB3Q05901 458 aa13.36□□□□□ -0.27
CD9-210ENST00000543916 PUDPQ08623 228 aa13.36□□□□□ -0.27
CD9-210ENST00000543916 FAM27E3Q08E93 113 aa13.36□□□□□ -0.27
CD9-210ENST00000543916 SEC23BQ15437 767 aa13.36□□□□□ -0.27
CD9-210ENST00000543916 FAM98BQ52LJ0 330 aaKnown RBP13.36□□□□□ -0.27
CD9-210ENST00000543916 CASP12Q6UXS9 341 aa13.36□□□□□ -0.27
CD9-210ENST00000543916 MEX3BQ6ZN04 569 aaKnown RBP13.36□□□□□ -0.27
CD9-210ENST00000543916 NANOGNBQ7Z5D8 188 aa13.36□□□□□ -0.27
CD9-210ENST00000543916 STK32CQ86UX6 486 aa13.36□□□□□ -0.27
CD9-210ENST00000543916 SPATA24Q86W54 205 aa13.36□□□□□ -0.27
CD9-210ENST00000543916 ZNF100Q8IYN0 542 aa13.36□□□□□ -0.27
CD9-210ENST00000543916 LIPHQ8WWY8 451 aa13.36□□□□□ -0.27
CD9-210ENST00000543916 POP5Q969H6 163 aaKnown RBP13.36□□□□□ -0.27
CD9-210ENST00000543916 UTP4Q969X6 686 aaKnown RBP13.36□□□□□ -0.27
CD9-210ENST00000543916 LRRC46Q96FV0 321 aa13.36□□□□□ -0.27
CD9-210ENST00000543916 ZNF347Q96SE7 839 aa13.36□□□□□ -0.27
CD9-210ENST00000543916 MMADHCQ9H3L0 296 aaPredicted RBP13.36□□□□□ -0.27
CD9-210ENST00000543916 TAS2R5Q9NYW4 299 aa13.36□□□□□ -0.27
CD9-210ENST00000543916 ASH1LQ9NR48 2969 aaKnown RBP13.36□□□□□ -0.27
CD9-210ENST00000543916 SPTBN1Q01082 2364 aaKnown RBP13.36□□□□□ -0.27
CD9-210ENST00000543916 LOC102725191A0A1B0GVB3 256 aa13.35□□□□□ -0.27
CD9-210ENST00000543916 TCRBV3S1A0A5B6 114 aa13.35□□□□□ -0.27
CD9-210ENST00000543916 DHRS12A0PJE2 317 aa13.35□□□□□ -0.27
CD9-210ENST00000543916 C11orf98E9PRG8 122 aa13.35□□□□□ -0.27
CD9-210ENST00000543916 IGHV3-9P01782 118 aa13.35□□□□□ -0.27
CD9-210ENST00000543916 HIST1H2ABP04908 130 aa13.35□□□□□ -0.27
CD9-210ENST00000543916 ADORA3P0DMS8 318 aa13.35□□□□□ -0.27
CD9-210ENST00000543916 RAP2AP10114 183 aa13.35□□□□□ -0.27
CD9-210ENST00000543916 POU2F1P14859 743 aa13.35□□□□□ -0.27
CD9-210ENST00000543916 ZNF43P17038 809 aa13.35□□□□□ -0.27
CD9-210ENST00000543916 ZNF787Q6DD87 383 aa13.35□□□□□ -0.27
CD9-210ENST00000543916 NHLRC1Q6VVB1 395 aa13.35□□□□□ -0.27
CD9-210ENST00000543916 BEND4Q6ZU67 534 aa13.35□□□□□ -0.27
CD9-210ENST00000543916 HIST3H2AQ7L7L0 130 aa13.35□□□□□ -0.27
CD9-210ENST00000543916 AAED1Q7RTV5 226 aa13.35□□□□□ -0.27
CD9-210ENST00000543916 WDFY1Q8IWB7 410 aa13.35□□□□□ -0.27
CD9-210ENST00000543916 DMRTC2Q8IXT2 367 aaPredicted RBP13.35□□□□□ -0.27
CD9-210ENST00000543916 RNF113BQ8IZP6 322 aaKnown RBP13.35□□□□□ -0.27
CD9-210ENST00000543916 GABRG1Q8N1C3 465 aa13.35□□□□□ -0.27
CD9-210ENST00000543916 CANT1Q8WVQ1 401 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms