RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.94■□□□□ 0.46
SUDS3-204ENST00000543473 DPM1O60762 260 aa17.93■□□□□ 0.46
SUDS3-204ENST00000543473 UBL4AP11441 157 aa17.93■□□□□ 0.46
SUDS3-204ENST00000543473 H3F3CQ6NXT2 135 aa17.93■□□□□ 0.46
SUDS3-204ENST00000543473 NLGN4YQ8NFZ3 816 aaPredicted RBP17.93■□□□□ 0.46
SUDS3-204ENST00000543473 SPPL3Q8TCT6 385 aa17.93■□□□□ 0.46
SUDS3-204ENST00000543473 ADAMTS18Q8TE60 1221 aa17.93■□□□□ 0.46
SUDS3-204ENST00000543473 FAM3CQ92520 227 aa17.93■□□□□ 0.46
SUDS3-204ENST00000543473 ARHGAP9Q9BRR9 750 aa17.93■□□□□ 0.46
SUDS3-204ENST00000543473 TUBGCP6Q96RT7 1819 aa17.93■□□□□ 0.46
SUDS3-204ENST00000543473 LILRB3O75022 631 aa17.93■□□□□ 0.46
SUDS3-204ENST00000543473 TPOP07202 933 aa17.93■□□□□ 0.46
SUDS3-204ENST00000543473 THEGLP0DJG4 465 aa17.93■□□□□ 0.46
SUDS3-204ENST00000543473 ELOCQ15369 112 aa17.93■□□□□ 0.46
SUDS3-204ENST00000543473 RPE65Q16518 533 aa17.93■□□□□ 0.46
SUDS3-204ENST00000543473 YIF1BQ5BJH7 314 aa17.93■□□□□ 0.46
SUDS3-204ENST00000543473 MSRB3Q8IXL7 192 aa17.93■□□□□ 0.46
SUDS3-204ENST00000543473 TMEM99Q8N816 258 aa17.93■□□□□ 0.46
SUDS3-204ENST00000543473 LINC01553A4QN01 128 aa17.93■□□□□ 0.46
SUDS3-204ENST00000543473 ARRDC5A6NEK1 342 aa17.93■□□□□ 0.46
SUDS3-204ENST00000543473 ZNF84P51523 738 aa17.93■□□□□ 0.46
SUDS3-204ENST00000543473 PDX1P52945 283 aa17.93■□□□□ 0.46
SUDS3-204ENST00000543473 BCL2A1Q16548 175 aa17.93■□□□□ 0.46
SUDS3-204ENST00000543473 TRAPPC6BQ86SZ2 158 aa17.93■□□□□ 0.46
SUDS3-204ENST00000543473 LIX1LQ8IVB5 337 aa17.93■□□□□ 0.46
SUDS3-204ENST00000543473 SLC25A21Q9BQT8 299 aaPredicted RBP17.93■□□□□ 0.46
SUDS3-204ENST00000543473 SLC23A1Q9UHI7 598 aa17.93■□□□□ 0.46
SUDS3-204ENST00000543473 TMEM269A0A1B0GVZ9 245 aa17.93■□□□□ 0.46
SUDS3-204ENST00000543473 FAM230AA0A1W2PPH8 454 aa17.93■□□□□ 0.46
SUDS3-204ENST00000543473 HMGN4O00479 90 aa17.93■□□□□ 0.46
SUDS3-204ENST00000543473 PHF19Q5T6S3 580 aa17.93■□□□□ 0.46
SUDS3-204ENST00000543473 CYHR1Q6ZMK1 362 aa17.93■□□□□ 0.46
SUDS3-204ENST00000543473 RDH10Q8IZV5 341 aa17.93■□□□□ 0.46
SUDS3-204ENST00000543473 ST7LQ8TDW4 575 aa17.93■□□□□ 0.46
SUDS3-204ENST00000543473 UCN3Q969E3 161 aa17.93■□□□□ 0.46
SUDS3-204ENST00000543473 PPP4R1LQ9P1A2 415 aa17.93■□□□□ 0.46
SUDS3-204ENST00000543473 CD207Q9UJ71 328 aa17.93■□□□□ 0.46
SUDS3-204ENST00000543473 IFNGR1P15260 489 aa17.92■□□□□ 0.46
SUDS3-204ENST00000543473 SOX18P35713 384 aa17.92■□□□□ 0.46
SUDS3-204ENST00000543473 CLDN2P57739 230 aa17.92■□□□□ 0.46
SUDS3-204ENST00000543473 COX15Q7KZN9 410 aa17.92■□□□□ 0.46
SUDS3-204ENST00000543473 SULF2Q8IWU5 870 aa17.92■□□□□ 0.46
SUDS3-204ENST00000543473 GLYATL2Q8WU03 294 aa17.92■□□□□ 0.46
SUDS3-204ENST00000543473 ST8SIA2Q92186 375 aa17.92■□□□□ 0.46
SUDS3-204ENST00000543473 CNTNAP3Q9BZ76 1288 aa17.92■□□□□ 0.46
SUDS3-204ENST00000543473 NPIPA2E9PIF3 369 aa17.92■□□□□ 0.46
SUDS3-204ENST00000543473 NPIPA3F8WFD2 350 aa17.92■□□□□ 0.46
SUDS3-204ENST00000543473 SGK494L7N484 410 aa17.92■□□□□ 0.46
SUDS3-204ENST00000543473 SSX4O60224 188 aa17.92■□□□□ 0.46
SUDS3-204ENST00000543473 APBB3O95704 486 aa17.92■□□□□ 0.46
SUDS3-204ENST00000543473 EIF4EP06730 217 aaKnown RBP17.92■□□□□ 0.46
SUDS3-204ENST00000543473 NR0B1P51843 470 aaKnown RBP17.92■□□□□ 0.46
SUDS3-204ENST00000543473 TLE3Q04726 772 aa17.92■□□□□ 0.46
SUDS3-204ENST00000543473 FAM78AQ5JUQ0 283 aa17.92■□□□□ 0.46
SUDS3-204ENST00000543473 NDUFAF7Q7L592 441 aa17.92■□□□□ 0.46
SUDS3-204ENST00000543473 CCDC71LQ8N9Z2 235 aa17.92■□□□□ 0.46
SUDS3-204ENST00000543473 OR51S1Q8NGJ8 323 aa17.92■□□□□ 0.46
SUDS3-204ENST00000543473 TBC1D20Q96BZ9 403 aa17.92■□□□□ 0.46
SUDS3-204ENST00000543473 CACNA1CQ13936 2221 aa17.92■□□□□ 0.46
SUDS3-204ENST00000543473 TMEM202A6NGA9 273 aa17.92■□□□□ 0.46
SUDS3-204ENST00000543473 M0QYG6 137 aa17.92■□□□□ 0.46
SUDS3-204ENST00000543473 OR2T1O43869 369 aa17.92■□□□□ 0.46
SUDS3-204ENST00000543473 SEMA4FO95754 770 aa17.92■□□□□ 0.46
SUDS3-204ENST00000543473 MYOGP15173 224 aa17.92■□□□□ 0.46
SUDS3-204ENST00000543473 HTR2CP28335 458 aa17.92■□□□□ 0.46
SUDS3-204ENST00000543473 SLC6A8P48029 635 aa17.92■□□□□ 0.46
SUDS3-204ENST00000543473 ZNF750Q32MQ0 723 aa17.92■□□□□ 0.46
SUDS3-204ENST00000543473 SLC22A6Q4U2R8 563 aa17.92■□□□□ 0.46
SUDS3-204ENST00000543473 ESPNLQ6ZVH7 1005 aa17.92■□□□□ 0.46
SUDS3-204ENST00000543473 GRAMD2AQ8IUY3 354 aa17.92■□□□□ 0.46
SUDS3-204ENST00000543473 SLC16A11Q8NCK7 471 aa17.92■□□□□ 0.46
SUDS3-204ENST00000543473 SPIN2AQ99865 258 aa17.92■□□□□ 0.46
SUDS3-204ENST00000543473 SPIN2BQ9BPZ2 258 aa17.92■□□□□ 0.46
SUDS3-204ENST00000543473 SLC6A20Q9NP91 592 aa17.92■□□□□ 0.46
SUDS3-204ENST00000543473 KIR2DS3Q14952 304 aa17.92■□□□□ 0.46
SUDS3-204ENST00000543473 FAM111BQ6SJ93 734 aa17.92■□□□□ 0.46
SUDS3-204ENST00000543473 DPY19L4Q7Z388 723 aa17.92■□□□□ 0.46
SUDS3-204ENST00000543473 OR5T1Q8NG75 326 aa17.92■□□□□ 0.46
SUDS3-204ENST00000543473 SORCS2Q96PQ0 1159 aa17.92■□□□□ 0.46
SUDS3-204ENST00000543473 TCEAL2Q9H3H9 227 aaPredicted RBP17.92■□□□□ 0.46
SUDS3-204ENST00000543473 PRSS16Q9NQE7 514 aa17.92■□□□□ 0.46
SUDS3-204ENST00000543473 PLEKHJ1Q9NW61 149 aa17.92■□□□□ 0.46
SUDS3-204ENST00000543473 APOBEC3BQ9UH17 382 aaKnown RBP17.92■□□□□ 0.46
SUDS3-204ENST00000543473 SLAMF9Q96A28 289 aa17.91■□□□□ 0.46
SUDS3-204ENST00000543473 ICKQ9UPZ9 632 aa17.91■□□□□ 0.46
SUDS3-204ENST00000543473 A0A1B0GWA3 101 aa17.91■□□□□ 0.46
SUDS3-204ENST00000543473 ZC3H12DA2A288 527 aaKnown RBP17.91■□□□□ 0.46
SUDS3-204ENST00000543473 NME2P22392 152 aa17.91■□□□□ 0.46
SUDS3-204ENST00000543473 MRPL19P49406 292 aaKnown RBP17.91■□□□□ 0.46
SUDS3-204ENST00000543473 TNFRSF17Q02223 184 aa17.91■□□□□ 0.46
SUDS3-204ENST00000543473 OVCH1Q7RTY7 1134 aa17.91■□□□□ 0.46
SUDS3-204ENST00000543473 MMP21Q8N119 569 aa17.91■□□□□ 0.46
SUDS3-204ENST00000543473 ZNF511Q8NB15 262 aa17.91■□□□□ 0.46
SUDS3-204ENST00000543473 ASB17Q8WXJ9 295 aa17.91■□□□□ 0.46
SUDS3-204ENST00000543473 K7EPK0 472 aa17.91■□□□□ 0.46
SUDS3-204ENST00000543473 CTGFP29279 349 aa17.91■□□□□ 0.46
SUDS3-204ENST00000543473 TAS2R20P59543 309 aa17.91■□□□□ 0.46
SUDS3-204ENST00000543473 SLC35D2Q76EJ3 337 aa17.91■□□□□ 0.46
SUDS3-204ENST00000543473 ZNF761Q86XN6 746 aaPredicted RBP17.91■□□□□ 0.46
SUDS3-204ENST00000543473 FAM71E2Q8N5Q1 922 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms