RNA–Protein interactions for RNA: ENST00000542876.1

PPP1CA-210, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 3

Gene PPP1CA, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-210ENST00000542876 PRR14Q9BWN1 585 aa15.15■□□□□ 0.02
PPP1CA-210ENST00000542876 LINC00470Q9BZP3 86 aa15.15■□□□□ 0.02
PPP1CA-210ENST00000542876 THAP1Q9NVV9 213 aa15.15■□□□□ 0.02
PPP1CA-210ENST00000542876 CRNNQ9UBG3 495 aaPredicted RBP15.15■□□□□ 0.02
PPP1CA-210ENST00000542876 RPS6KB2Q9UBS0 482 aa15.15■□□□□ 0.02
PPP1CA-210ENST00000542876 NR5A2O00482 541 aa15.14■□□□□ 0.01
PPP1CA-210ENST00000542876 NPIPB7O75200 414 aa15.14■□□□□ 0.01
PPP1CA-210ENST00000542876 UPK3AO75631 287 aa15.14■□□□□ 0.01
PPP1CA-210ENST00000542876 CECR9P0C854 216 aa15.14■□□□□ 0.01
PPP1CA-210ENST00000542876 ZCCHC18P0CG32 403 aa15.14■□□□□ 0.01
PPP1CA-210ENST00000542876 PNMTP11086 282 aa15.14■□□□□ 0.01
PPP1CA-210ENST00000542876 PPOXP50336 477 aa15.14■□□□□ 0.01
PPP1CA-210ENST00000542876 MVDP53602 400 aa15.14■□□□□ 0.01
PPP1CA-210ENST00000542876 CLDN17P56750 224 aa15.14■□□□□ 0.01
PPP1CA-210ENST00000542876 TUBA1BP68363 451 aa15.14■□□□□ 0.01
PPP1CA-210ENST00000542876 TUBA4AP68366 448 aa15.14■□□□□ 0.01
PPP1CA-210ENST00000542876 C1DQ13901 141 aaKnown RBP15.14■□□□□ 0.01
PPP1CA-210ENST00000542876 ADIPOQQ15848 244 aa15.14■□□□□ 0.01
PPP1CA-210ENST00000542876 KRTAP24-1Q3LI83 254 aa15.14■□□□□ 0.01
PPP1CA-210ENST00000542876 ZNF311Q5JNZ3 666 aa15.14■□□□□ 0.01
PPP1CA-210ENST00000542876 RPS26P11Q5JNZ5 115 aaPredicted RBP15.14■□□□□ 0.01
PPP1CA-210ENST00000542876 TUBA1AQ71U36 451 aa15.14■□□□□ 0.01
PPP1CA-210ENST00000542876 SERPINA11Q86U17 422 aa15.14■□□□□ 0.01
PPP1CA-210ENST00000542876 FAM169BQ8N8A8 192 aa15.14■□□□□ 0.01
PPP1CA-210ENST00000542876 ANKK1Q8NFD2 765 aa15.14■□□□□ 0.01
PPP1CA-210ENST00000542876 PLK3Q9H4B4 646 aa15.14■□□□□ 0.01
PPP1CA-210ENST00000542876 SLC6A13Q9NSD5 602 aa15.14■□□□□ 0.01
PPP1CA-210ENST00000542876 RCE1Q9Y256 329 aa15.14■□□□□ 0.01
PPP1CA-210ENST00000542876 IGHV4-61A0A0C4DH41 118 aa15.13■□□□□ 0.01
PPP1CA-210ENST00000542876 SLC35F4A4IF30 521 aa15.13■□□□□ 0.01
PPP1CA-210ENST00000542876 TMEM229AB2RXF0 380 aa15.13■□□□□ 0.01
PPP1CA-210ENST00000542876 SLC43A1O75387 559 aa15.13■□□□□ 0.01
PPP1CA-210ENST00000542876 TGFAP01135 160 aa15.13■□□□□ 0.01
PPP1CA-210ENST00000542876 ZNF23P17027 643 aa15.13■□□□□ 0.01
PPP1CA-210ENST00000542876 RPS5P46782 204 aaKnown RBP15.13■□□□□ 0.01
PPP1CA-210ENST00000542876 IDH3GP51553 393 aaPredicted RBP15.13■□□□□ 0.01
PPP1CA-210ENST00000542876 SQLEQ14534 574 aa15.13■□□□□ 0.01
PPP1CA-210ENST00000542876 C6orf10Q5SRN2 563 aa15.13■□□□□ 0.01
PPP1CA-210ENST00000542876 MSANTD1Q6ZTZ1 278 aa15.13■□□□□ 0.01
PPP1CA-210ENST00000542876 IL17RELQ6ZVW7 336 aa15.13■□□□□ 0.01
PPP1CA-210ENST00000542876 KDM8Q8N371 416 aa15.13■□□□□ 0.01
PPP1CA-210ENST00000542876 GPR137CQ8N3F9 429 aa15.13■□□□□ 0.01
PPP1CA-210ENST00000542876 NUP37Q8NFH4 326 aa15.13■□□□□ 0.01
PPP1CA-210ENST00000542876 ANKRD27Q96NW4 1050 aa15.13■□□□□ 0.01
PPP1CA-210ENST00000542876 BPESC1Q9GZL8 116 aa15.13■□□□□ 0.01
PPP1CA-210ENST00000542876 ZIM2Q9NZV7 527 aa15.13■□□□□ 0.01
PPP1CA-210ENST00000542876 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.13■□□□□ 0.01
PPP1CA-210ENST00000542876 V9GYY5 206 aaPredicted RBP15.13■□□□□ 0.01
PPP1CA-210ENST00000542876 AKAP8O43823 692 aaKnown RBP15.12■□□□□ 0.01
PPP1CA-210ENST00000542876 OR2T1O43869 369 aa15.12■□□□□ 0.01
PPP1CA-210ENST00000542876 IGLV1-44P01699 117 aa15.12■□□□□ 0.01
PPP1CA-210ENST00000542876 NPR2P20594 1047 aa15.12■□□□□ 0.01
PPP1CA-210ENST00000542876 CAPZA2P47755 286 aa15.12■□□□□ 0.01
PPP1CA-210ENST00000542876 ARF1P84077 181 aaKnown RBP15.12■□□□□ 0.01
PPP1CA-210ENST00000542876 IL1RL1Q01638 556 aa15.12■□□□□ 0.01
PPP1CA-210ENST00000542876 LINGO2Q7L985 606 aa15.12■□□□□ 0.01
PPP1CA-210ENST00000542876 NEU4Q8WWR8 484 aaPredicted RBP15.12■□□□□ 0.01
PPP1CA-210ENST00000542876 SLC35B4Q969S0 331 aa15.12■□□□□ 0.01
PPP1CA-210ENST00000542876 OXGR1Q96P68 337 aa15.12■□□□□ 0.01
PPP1CA-210ENST00000542876 C19orf24Q9BVV8 132 aa15.12■□□□□ 0.01
PPP1CA-210ENST00000542876 RAD21L1Q9H4I0 556 aa15.12■□□□□ 0.01
PPP1CA-210ENST00000542876 ZNF442Q9H7R0 627 aa15.12■□□□□ 0.01
PPP1CA-210ENST00000542876 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.11■□□□□ 0.014e-18■■□□□ 14
PPP1CA-210ENST00000542876 SVEP1Q4LDE5 3571 aa15.11■□□□□ 0.01
PPP1CA-210ENST00000542876 C5orf58C9J3I9 102 aa15.11■□□□□ 0.01
PPP1CA-210ENST00000542876 FTCDNL1E5RQL4 147 aa15.11■□□□□ 0.01
PPP1CA-210ENST00000542876 RPL36A-HNRNPH2H7BZ11 118 aa15.11■□□□□ 0.01
PPP1CA-210ENST00000542876 hCG_2039718K7EN88 272 aa15.11■□□□□ 0.01
PPP1CA-210ENST00000542876 HAX1O00165 279 aa15.11■□□□□ 0.01
PPP1CA-210ENST00000542876 AIM2O14862 343 aa15.11■□□□□ 0.01
PPP1CA-210ENST00000542876 IGKV3-15P01624 115 aa15.11■□□□□ 0.01
PPP1CA-210ENST00000542876 DAOP14920 347 aa15.11■□□□□ 0.01
PPP1CA-210ENST00000542876 CBR1P16152 277 aa15.11■□□□□ 0.01
PPP1CA-210ENST00000542876 CALCRP30988 508 aa15.11■□□□□ 0.01
PPP1CA-210ENST00000542876 ARR3P36575 388 aa15.11■□□□□ 0.01
PPP1CA-210ENST00000542876 POLR2JP52435 117 aaKnown RBP15.11■□□□□ 0.01
PPP1CA-210ENST00000542876 NPRL3Q12980 569 aa15.11■□□□□ 0.01
PPP1CA-210ENST00000542876 TNFAIP8L3Q5GJ75 292 aa15.11■□□□□ 0.01
PPP1CA-210ENST00000542876 LIPNQ5VXI9 398 aa15.11■□□□□ 0.01
PPP1CA-210ENST00000542876 C5orf46Q6UWT4 87 aa15.11■□□□□ 0.01
PPP1CA-210ENST00000542876 SPATA21Q7Z572 469 aa15.11■□□□□ 0.01
PPP1CA-210ENST00000542876 CCDC36Q8IYA8 594 aa15.11■□□□□ 0.01
PPP1CA-210ENST00000542876 PIK3C3Q8NEB9 887 aa15.11■□□□□ 0.01
PPP1CA-210ENST00000542876 BBS10Q8TAM1 723 aa15.11■□□□□ 0.01
PPP1CA-210ENST00000542876 MGARPQ8TDB4 240 aa15.11■□□□□ 0.01
PPP1CA-210ENST00000542876 ZBTB9Q96C00 473 aa15.11■□□□□ 0.01
PPP1CA-210ENST00000542876 KTI12Q96EK9 354 aaPredicted RBP15.11■□□□□ 0.01
PPP1CA-210ENST00000542876 PARD6BQ9BYG5 372 aa15.11■□□□□ 0.01
PPP1CA-210ENST00000542876 DYNLRB1Q9NP97 96 aa15.11■□□□□ 0.01
PPP1CA-210ENST00000542876 CHST2Q9Y4C5 530 aa15.11■□□□□ 0.01
PPP1CA-210ENST00000542876 PCDHB14Q9Y5E9 798 aa15.11■□□□□ 0.01
PPP1CA-210ENST00000542876 ARFGEF3Q5TH69 2177 aa15.1■□□□□ 0.01
PPP1CA-210ENST00000542876 UBDO15205 165 aa15.1■□□□□ 0.01
PPP1CA-210ENST00000542876 SNNO75324 88 aaPredicted RBP15.1■□□□□ 0.01
PPP1CA-210ENST00000542876 STAMBPO95630 424 aa15.1■□□□□ 0.01
PPP1CA-210ENST00000542876 THBS4P35443 961 aa15.1■□□□□ 0.01
PPP1CA-210ENST00000542876 CHN2P52757 468 aa15.1■□□□□ 0.01
PPP1CA-210ENST00000542876 HOXC5Q00444 222 aa15.1■□□□□ 0.01
PPP1CA-210ENST00000542876 EGR4Q05215 589 aa15.1■□□□□ 0.01
PPP1CA-210ENST00000542876 RGNQ15493 299 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms