RNA–Protein interactions for RNA: ENST00000541770.1

CLSTN3-212, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-212ENST00000541770 SLC7A1P30825 629 aa7.72□□□□□ -1.17
CLSTN3-212ENST00000541770 SFTPDP35247 375 aa7.72□□□□□ -1.17
CLSTN3-212ENST00000541770 MSX2P35548 267 aaPredicted RBP7.72□□□□□ -1.17
CLSTN3-212ENST00000541770 ACVR1BP36896 505 aa7.72□□□□□ -1.17
CLSTN3-212ENST00000541770 CDKN1AP38936 164 aa7.72□□□□□ -1.17
CLSTN3-212ENST00000541770 OR1E2P47887 323 aa7.72□□□□□ -1.17
CLSTN3-212ENST00000541770 CDH12P55289 794 aa7.72□□□□□ -1.17
CLSTN3-212ENST00000541770 TPD52P55327 224 aaPredicted RBP7.72□□□□□ -1.17
CLSTN3-212ENST00000541770 CARD18P57730 90 aa7.72□□□□□ -1.17
CLSTN3-212ENST00000541770 RAC3P60763 192 aa7.72□□□□□ -1.17
CLSTN3-212ENST00000541770 CSNK2A1P68400 391 aaPredicted RBP7.72□□□□□ -1.17
CLSTN3-212ENST00000541770 TRAP1Q12931 704 aaKnown RBP7.72□□□□□ -1.17
CLSTN3-212ENST00000541770 ALG10BQ5I7T1 473 aa7.72□□□□□ -1.17
CLSTN3-212ENST00000541770 HBMQ6B0K9 141 aa7.72□□□□□ -1.17
CLSTN3-212ENST00000541770 LCN8Q6JVE9 175 aa7.72□□□□□ -1.17
CLSTN3-212ENST00000541770 LINC00114Q6XXX2 140 aa7.72□□□□□ -1.17
CLSTN3-212ENST00000541770 TMPPEQ6ZT21 453 aa7.72□□□□□ -1.17
CLSTN3-212ENST00000541770 CCDC121Q6ZUS5 278 aa7.72□□□□□ -1.17
CLSTN3-212ENST00000541770 FKBP9P1Q75LS8 142 aa7.72□□□□□ -1.17
CLSTN3-212ENST00000541770 RBM45Q8IUH3 476 aaKnown RBP7.72□□□□□ -1.17
CLSTN3-212ENST00000541770 ZNF611Q8N823 705 aa7.72□□□□□ -1.17
CLSTN3-212ENST00000541770 VANGL1Q8TAA9 524 aaPredicted RBP7.72□□□□□ -1.17
CLSTN3-212ENST00000541770 OSTF1Q92882 214 aa7.72□□□□□ -1.17
CLSTN3-212ENST00000541770 CPNE4Q96A23 557 aaPredicted RBP7.72□□□□□ -1.17
CLSTN3-212ENST00000541770 MPP4Q96JB8 637 aa7.72□□□□□ -1.17
CLSTN3-212ENST00000541770 HSH2DQ96JZ2 352 aa7.72□□□□□ -1.17
CLSTN3-212ENST00000541770 CLPTM1LQ96KA5 538 aa7.72□□□□□ -1.17
CLSTN3-212ENST00000541770 OR5B2Q96R09 309 aa7.72□□□□□ -1.17
CLSTN3-212ENST00000541770 PRR14Q9BWN1 585 aa7.72□□□□□ -1.17
CLSTN3-212ENST00000541770 CADM1Q9BY67 442 aaKnown RBP7.72□□□□□ -1.17
CLSTN3-212ENST00000541770 AMBRA1Q9C0C7 1298 aa7.72□□□□□ -1.17
CLSTN3-212ENST00000541770 LRMDAQ9H2I8 198 aa7.72□□□□□ -1.17
CLSTN3-212ENST00000541770 COQ10BQ9H8M1 238 aa7.72□□□□□ -1.17
CLSTN3-212ENST00000541770 A0A1W2PNR3 127 aa7.71□□□□□ -1.18
CLSTN3-212ENST00000541770 ELOA3DA6NLF2 546 aaPredicted RBP7.71□□□□□ -1.18
CLSTN3-212ENST00000541770 CPSF4LA6NMK7 179 aaKnown RBP7.71□□□□□ -1.18
CLSTN3-212ENST00000541770 SULT2B1O00204 365 aa7.71□□□□□ -1.18
CLSTN3-212ENST00000541770 CLOCKO15516 846 aa7.71□□□□□ -1.18
CLSTN3-212ENST00000541770 KLF4O43474 513 aa7.71□□□□□ -1.18
CLSTN3-212ENST00000541770 CXCL13O43927 109 aa7.71□□□□□ -1.18
CLSTN3-212ENST00000541770 FZD7O75084 574 aa7.71□□□□□ -1.18
CLSTN3-212ENST00000541770 PRKD3O94806 890 aa7.71□□□□□ -1.18
CLSTN3-212ENST00000541770 LYPD3O95274 346 aa7.71□□□□□ -1.18
CLSTN3-212ENST00000541770 STAMBPO95630 424 aa7.71□□□□□ -1.18
CLSTN3-212ENST00000541770 OPN1LWP04000 364 aa7.71□□□□□ -1.18
CLSTN3-212ENST00000541770 SEMG1P04279 462 aa7.71□□□□□ -1.18
CLSTN3-212ENST00000541770 IFNW1P05000 195 aa7.71□□□□□ -1.18
CLSTN3-212ENST00000541770 THBDP07204 575 aa7.71□□□□□ -1.18
CLSTN3-212ENST00000541770 FCGR2AP12318 317 aa7.71□□□□□ -1.18
CLSTN3-212ENST00000541770 IFNA8P32881 189 aa7.71□□□□□ -1.18
CLSTN3-212ENST00000541770 EIF1AXP47813 144 aaKnown RBP7.71□□□□□ -1.18
CLSTN3-212ENST00000541770 DIO1P49895 249 aa7.71□□□□□ -1.18
CLSTN3-212ENST00000541770 MS4A2Q01362 244 aa7.71□□□□□ -1.18
CLSTN3-212ENST00000541770 EGR4Q05215 589 aa7.71□□□□□ -1.18
CLSTN3-212ENST00000541770 FAPQ12884 760 aa7.71□□□□□ -1.18
CLSTN3-212ENST00000541770 PON3Q15166 354 aa7.71□□□□□ -1.18
CLSTN3-212ENST00000541770 SGCBQ16585 318 aa7.71□□□□□ -1.18
CLSTN3-212ENST00000541770 ZNF239Q16600 458 aaKnown RBP7.71□□□□□ -1.18
CLSTN3-212ENST00000541770 ZSCAN26Q16670 478 aa7.71□□□□□ -1.18
CLSTN3-212ENST00000541770 ELOA3BQ3SY89 546 aa7.71□□□□□ -1.18
CLSTN3-212ENST00000541770 TSPYL5Q86VY4 417 aaPredicted RBP7.71□□□□□ -1.18
CLSTN3-212ENST00000541770 DHFR2Q86XF0 187 aa7.71□□□□□ -1.18
CLSTN3-212ENST00000541770 ATP6V1C2Q8NEY4 427 aa7.71□□□□□ -1.18
CLSTN3-212ENST00000541770 ELOA3Q8NG57 546 aa7.71□□□□□ -1.18
CLSTN3-212ENST00000541770 OR6S1Q8NH40 331 aa7.71□□□□□ -1.18
CLSTN3-212ENST00000541770 FNDC9Q8TBE3 224 aa7.71□□□□□ -1.18
CLSTN3-212ENST00000541770 IGFBPL1Q8WX77 278 aa7.71□□□□□ -1.18
CLSTN3-212ENST00000541770 MCUR1Q96AQ8 359 aa7.71□□□□□ -1.18
CLSTN3-212ENST00000541770 PYURFQ96I23 114 aa7.71□□□□□ -1.18
CLSTN3-212ENST00000541770 ARL5BQ96KC2 179 aa7.71□□□□□ -1.18
CLSTN3-212ENST00000541770 C7orf34Q96L11 122 aa7.71□□□□□ -1.18
CLSTN3-212ENST00000541770 PRRC1Q96M27 445 aa7.71□□□□□ -1.18
CLSTN3-212ENST00000541770 TMEM43Q9BTV4 400 aa7.71□□□□□ -1.18
CLSTN3-212ENST00000541770 ZNF426Q9BUY5 554 aa7.71□□□□□ -1.18
CLSTN3-212ENST00000541770 SRXN1Q9BYN0 137 aa7.71□□□□□ -1.18
CLSTN3-212ENST00000541770 PRRG4Q9BZD6 226 aa7.71□□□□□ -1.18
CLSTN3-212ENST00000541770 OR11A1Q9GZK7 315 aa7.71□□□□□ -1.18
CLSTN3-212ENST00000541770 MCTS1Q9ULC4 181 aaKnown RBP7.71□□□□□ -1.18
CLSTN3-212ENST00000541770 A4GNTQ9UNA3 340 aa7.71□□□□□ -1.18
CLSTN3-212ENST00000541770 COL6A5A8TX70 2615 aa7.71□□□□□ -1.18
CLSTN3-212ENST00000541770 TLN2Q9Y4G6 2542 aa7.7□□□□□ -1.18
CLSTN3-212ENST00000541770 IGKV1D-42A0A075B6H8 117 aa7.7□□□□□ -1.18
CLSTN3-212ENST00000541770 TCRBV5S2A0A599 114 aa7.7□□□□□ -1.18
CLSTN3-212ENST00000541770 ZC3H12DA2A288 527 aaKnown RBP7.7□□□□□ -1.18
CLSTN3-212ENST00000541770 AQP12BA6NM10 295 aa7.7□□□□□ -1.18
CLSTN3-212ENST00000541770 OR2T1O43869 369 aa7.7□□□□□ -1.18
CLSTN3-212ENST00000541770 EIF1BO60739 113 aaKnown RBP7.7□□□□□ -1.18
CLSTN3-212ENST00000541770 TMCC2O75069 709 aa7.7□□□□□ -1.18
CLSTN3-212ENST00000541770 PRSS23O95084 383 aa7.7□□□□□ -1.18
CLSTN3-212ENST00000541770 SYNGR4O95473 234 aa7.7□□□□□ -1.18
CLSTN3-212ENST00000541770 PLGP00747 810 aaPredicted RBP7.7□□□□□ -1.18
CLSTN3-212ENST00000541770 CGAP01215 116 aa7.7□□□□□ -1.18
CLSTN3-212ENST00000541770 IGF2P01344 180 aa7.7□□□□□ -1.18
CLSTN3-212ENST00000541770 THY1P04216 161 aa7.7□□□□□ -1.18
CLSTN3-212ENST00000541770 FAM157CP0CG43 387 aa7.7□□□□□ -1.18
CLSTN3-212ENST00000541770 TFPIP10646 304 aa7.7□□□□□ -1.18
CLSTN3-212ENST00000541770 CD8BP10966 210 aa7.7□□□□□ -1.18
CLSTN3-212ENST00000541770 IMPDH2P12268 514 aa7.7□□□□□ -1.18
CLSTN3-212ENST00000541770 PPP3CBP16298 524 aa7.7□□□□□ -1.18
CLSTN3-212ENST00000541770 ITGA2P17301 1181 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms