RNA–Protein interactions for RNA: ENST00000541204.5

RNF4-222, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 2,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-222ENST00000541204 PHF7Q9BWX1 381 aaPredicted RBP11.45□□□□□ -0.58
RNF4-222ENST00000541204 METTL17Q9H7H0 456 aaPredicted RBP11.45□□□□□ -0.58
RNF4-222ENST00000541204 GPR27Q9NS67 375 aa11.45□□□□□ -0.58
RNF4-222ENST00000541204 PTTG3PQ9NZH4 202 aa11.45□□□□□ -0.58
RNF4-222ENST00000541204 ERVK-19Q9WJR5 959 aa11.45□□□□□ -0.58
RNF4-222ENST00000541204 RCE1Q9Y256 329 aa11.45□□□□□ -0.58
RNF4-222ENST00000541204 FRYLO94915 3013 aa11.45□□□□□ -0.58
RNF4-222ENST00000541204 COL6A3P12111 3177 aa11.45□□□□□ -0.58
RNF4-222ENST00000541204 A0A1B0GVI7 797 aa11.45□□□□□ -0.58
RNF4-222ENST00000541204 A8MUA0 341 aa11.45□□□□□ -0.58
RNF4-222ENST00000541204 C10orf142B7Z368 130 aa11.45□□□□□ -0.58
RNF4-222ENST00000541204 IMPA2O14732 288 aa11.45□□□□□ -0.58
RNF4-222ENST00000541204 EDNRAP25101 427 aa11.45□□□□□ -0.58
RNF4-222ENST00000541204 MAGEB1P43366 347 aa11.45□□□□□ -0.58
RNF4-222ENST00000541204 CAPZBP47756 277 aa11.45□□□□□ -0.58
RNF4-222ENST00000541204 CSNK1EP49674 416 aaKnown RBP11.45□□□□□ -0.58
RNF4-222ENST00000541204 HSD17B12Q53GQ0 312 aa11.45□□□□□ -0.58
RNF4-222ENST00000541204 EXOSC6Q5RKV6 272 aaKnown RBP11.45□□□□□ -0.58
RNF4-222ENST00000541204 FGD2Q7Z6J4 655 aa11.45□□□□□ -0.58
RNF4-222ENST00000541204 SERPINA12Q8IW75 414 aa11.45□□□□□ -0.58
RNF4-222ENST00000541204 GATSQ8NAP1 163 aa11.45□□□□□ -0.58
RNF4-222ENST00000541204 RCBTB1Q8NDN9 531 aa11.45□□□□□ -0.58
RNF4-222ENST00000541204 OR2T35Q8NGX2 323 aa11.45□□□□□ -0.58
RNF4-222ENST00000541204 LMF1Q96S06 567 aa11.45□□□□□ -0.58
RNF4-222ENST00000541204 CNN2Q99439 309 aaKnown RBP11.45□□□□□ -0.58
RNF4-222ENST00000541204 SLC25A18Q9H1K4 315 aa11.45□□□□□ -0.58
RNF4-222ENST00000541204 CLEC4MQ9H2X3 399 aaPredicted RBP11.45□□□□□ -0.58
RNF4-222ENST00000541204 PRTFDC1Q9NRG1 225 aa11.45□□□□□ -0.58
RNF4-222ENST00000541204 ADAM18Q9Y3Q7 739 aa11.45□□□□□ -0.58
RNF4-222ENST00000541204 OR10H1Q9Y4A9 318 aa11.45□□□□□ -0.58
RNF4-222ENST00000541204 PCDHGA9Q9Y5G4 932 aaKnown RBP11.45□□□□□ -0.58
RNF4-222ENST00000541204 AUP1Q9Y679 476 aa11.45□□□□□ -0.58
RNF4-222ENST00000541204 PSMD9O00233 223 aa11.44□□□□□ -0.58
RNF4-222ENST00000541204 GSTZ1O43708 216 aaPredicted RBP11.44□□□□□ -0.58
RNF4-222ENST00000541204 OR2T7P0C7T2 308 aa11.44□□□□□ -0.58
RNF4-222ENST00000541204 ZNF250P15622 560 aa11.44□□□□□ -0.58
RNF4-222ENST00000541204 RAG2P55895 527 aa11.44□□□□□ -0.58
RNF4-222ENST00000541204 DYRK1AQ13627 763 aa11.44□□□□□ -0.58
RNF4-222ENST00000541204 ALG10BQ5I7T1 473 aa11.44□□□□□ -0.58
RNF4-222ENST00000541204 UBE2NLQ5JXB2 153 aa11.44□□□□□ -0.58
RNF4-222ENST00000541204 GPR139Q6DWJ6 353 aa11.44□□□□□ -0.58
RNF4-222ENST00000541204 SLC35F2Q8IXU6 374 aa11.44□□□□□ -0.58
RNF4-222ENST00000541204 CMIPQ8IY22 773 aa11.44□□□□□ -0.58
RNF4-222ENST00000541204 ARHGEF39Q8N4T4 335 aa11.44□□□□□ -0.58
RNF4-222ENST00000541204 OR11G2Q8NGC1 345 aa11.44□□□□□ -0.58
RNF4-222ENST00000541204 OR2T27Q8NH04 317 aa11.44□□□□□ -0.58
RNF4-222ENST00000541204 HSPA12BQ96MM6 686 aa11.44□□□□□ -0.58
RNF4-222ENST00000541204 DGAT2Q96PD7 388 aa11.44□□□□□ -0.58
RNF4-222ENST00000541204 C7orf50Q9BRJ6 194 aaKnown RBP11.44□□□□□ -0.58
RNF4-222ENST00000541204 ZNF436Q9C0F3 470 aaPredicted RBP11.44□□□□□ -0.58
RNF4-222ENST00000541204 NOX4Q9NPH5 578 aa11.44□□□□□ -0.58
RNF4-222ENST00000541204 NRIP3Q9NQ35 241 aa11.44□□□□□ -0.58
RNF4-222ENST00000541204 LRIT1Q9P2V4 623 aa11.44□□□□□ -0.58
RNF4-222ENST00000541204 SCP2D1Q9UJQ7 156 aa11.44□□□□□ -0.58
RNF4-222ENST00000541204 COPS3Q9UNS2 423 aa11.44□□□□□ -0.58
RNF4-222ENST00000541204 BAIAP2Q9UQB8 552 aa11.44□□□□□ -0.58
RNF4-222ENST00000541204 IER3IP1Q9Y5U9 82 aa11.44□□□□□ -0.58
RNF4-222ENST00000541204 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.44□□□□□ -0.58
RNF4-222ENST00000541204 RPS10-NUDT3A0A1W2PQS6 291 aa11.44□□□□□ -0.58
RNF4-222ENST00000541204 IDSB3KWA1 339 aa11.44□□□□□ -0.58
RNF4-222ENST00000541204 MCIDASD6RGH6 385 aa11.44□□□□□ -0.58
RNF4-222ENST00000541204 G3V3Q6 166 aa11.44□□□□□ -0.58
RNF4-222ENST00000541204 GMFGO60234 142 aa11.44□□□□□ -0.58
RNF4-222ENST00000541204 PEX14O75381 377 aa11.44□□□□□ -0.58
RNF4-222ENST00000541204 NKX2-2O95096 273 aa11.44□□□□□ -0.58
RNF4-222ENST00000541204 CFDP00746 253 aaPredicted RBP11.44□□□□□ -0.58
RNF4-222ENST00000541204 MAP3K8P41279 467 aa11.44□□□□□ -0.58
RNF4-222ENST00000541204 CAPZA2P47755 286 aa11.44□□□□□ -0.58
RNF4-222ENST00000541204 VEGFCP49767 419 aa11.44□□□□□ -0.58
RNF4-222ENST00000541204 ACTA2P62736 377 aa11.44□□□□□ -0.58
RNF4-222ENST00000541204 ACTG2P63267 376 aa11.44□□□□□ -0.58
RNF4-222ENST00000541204 PRTGQ2VWP7 1150 aa11.44□□□□□ -0.58
RNF4-222ENST00000541204 NPSR1Q6W5P4 371 aa11.44□□□□□ -0.58
RNF4-222ENST00000541204 Q6ZTK2 550 aa11.44□□□□□ -0.58
RNF4-222ENST00000541204 NLRC3Q7RTR2 1065 aa11.44□□□□□ -0.58
RNF4-222ENST00000541204 OVCH1Q7RTY7 1134 aa11.44□□□□□ -0.58
RNF4-222ENST00000541204 COMMD7Q86VX2 200 aa11.44□□□□□ -0.58
RNF4-222ENST00000541204 LRRC20Q8TCA0 184 aa11.44□□□□□ -0.58
RNF4-222ENST00000541204 GFI1Q99684 422 aa11.44□□□□□ -0.58
RNF4-222ENST00000541204 ACTR6Q9GZN1 396 aa11.44□□□□□ -0.58
RNF4-222ENST00000541204 OR10A4Q9H209 315 aa11.44□□□□□ -0.58
RNF4-222ENST00000541204 C14orf105Q9NVL8 296 aa11.44□□□□□ -0.58
RNF4-222ENST00000541204 CHRNA9Q9UGM1 479 aa11.44□□□□□ -0.58
RNF4-222ENST00000541204 RNF215Q9Y6U7 377 aa11.44□□□□□ -0.58
RNF4-222ENST00000541204 SPAG17Q6Q759 2223 aa11.43□□□□□ -0.58
RNF4-222ENST00000541204 ACOD1A6NK06 481 aa11.43□□□□□ -0.58
RNF4-222ENST00000541204 CTDSPLO15194 276 aa11.43□□□□□ -0.58
RNF4-222ENST00000541204 SELENOFO60613 162 aa11.43□□□□□ -0.58
RNF4-222ENST00000541204 SRMP19623 302 aa11.43□□□□□ -0.58
RNF4-222ENST00000541204 CLDN12P56749 244 aa11.43□□□□□ -0.58
RNF4-222ENST00000541204 PUDPQ08623 228 aa11.43□□□□□ -0.58
RNF4-222ENST00000541204 COL19A1Q14993 1142 aa11.43□□□□□ -0.58
RNF4-222ENST00000541204 GXYLT1Q4G148 440 aa11.43□□□□□ -0.58
RNF4-222ENST00000541204 CDONQ4KMG0 1287 aa11.43□□□□□ -0.58
RNF4-222ENST00000541204 PRSS58Q8IYP2 241 aa11.43□□□□□ -0.58
RNF4-222ENST00000541204 ZNF433Q8N7K0 673 aaPredicted RBP11.43□□□□□ -0.58
RNF4-222ENST00000541204 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.43□□□□□ -0.58
RNF4-222ENST00000541204 OR4C3Q8NH37 302 aa11.43□□□□□ -0.58
RNF4-222ENST00000541204 OMA1Q96E52 524 aa11.43□□□□□ -0.58
RNF4-222ENST00000541204 RBP7Q96R05 134 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 106.8 ms