RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 PGRMC1O00264 195 aaKnown RBP3.93□□□□□ -1.78
SNHG1-214ENST00000540865 STX16O14662 325 aa3.93□□□□□ -1.78
SNHG1-214ENST00000540865 PPIHO43447 177 aaKnown RBP3.93□□□□□ -1.78
SNHG1-214ENST00000540865 AKAP10O43572 662 aa3.93□□□□□ -1.78
SNHG1-214ENST00000540865 SYNGR3O43761 229 aa3.93□□□□□ -1.78
SNHG1-214ENST00000540865 EIF4E2O60573 245 aaKnown RBP3.93□□□□□ -1.78
SNHG1-214ENST00000540865 PMS2P2O95744 297 aa3.93□□□□□ -1.78
SNHG1-214ENST00000540865 OTCP00480 354 aa3.93□□□□□ -1.78
SNHG1-214ENST00000540865 IGLV1-44P01699 117 aa3.93□□□□□ -1.78
SNHG1-214ENST00000540865 CECR9P0C854 216 aa3.93□□□□□ -1.78
SNHG1-214ENST00000540865 PF4V1P10720 104 aa3.93□□□□□ -1.78
SNHG1-214ENST00000540865 COL8A2P25067 703 aa3.93□□□□□ -1.78
SNHG1-214ENST00000540865 FKBP2P26885 142 aaKnown RBP3.93□□□□□ -1.78
SNHG1-214ENST00000540865 CALCRP30988 508 aa3.93□□□□□ -1.78
SNHG1-214ENST00000540865 TIA1P31483 386 aaKnown RBP eCLIP3.93□□□□□ -1.783e-6■■■■□ 22.3
SNHG1-214ENST00000540865 CRHR1P34998 444 aa3.93□□□□□ -1.78
SNHG1-214ENST00000540865 RBMXP38159 391 aaKnown RBP3.93□□□□□ -1.78
SNHG1-214ENST00000540865 MAGEA8P43361 318 aa3.93□□□□□ -1.78
SNHG1-214ENST00000540865 SELENOPP49908 381 aa3.93□□□□□ -1.78
SNHG1-214ENST00000540865 ZNF75DP51815 510 aa3.93□□□□□ -1.78
SNHG1-214ENST00000540865 UBE2NP61088 152 aaKnown RBP3.93□□□□□ -1.78
SNHG1-214ENST00000540865 ACSM2AQ08AH3 577 aa3.93□□□□□ -1.78
SNHG1-214ENST00000540865 C2orf80Q0P641 193 aa3.93□□□□□ -1.78
SNHG1-214ENST00000540865 PDIA2Q13087 525 aaKnown RBP3.93□□□□□ -1.78
SNHG1-214ENST00000540865 PIN1Q13526 163 aaPredicted RBP3.93□□□□□ -1.78
SNHG1-214ENST00000540865 CBFBQ13951 182 aa3.93□□□□□ -1.78
SNHG1-214ENST00000540865 FASTKD3Q14CZ7 662 aaKnown RBP3.93□□□□□ -1.78
SNHG1-214ENST00000540865 QPRTQ15274 297 aa3.93□□□□□ -1.78
SNHG1-214ENST00000540865 TBRG1Q3YBR2 411 aa3.93□□□□□ -1.78
SNHG1-214ENST00000540865 SPATS1Q496A3 300 aa3.93□□□□□ -1.78
SNHG1-214ENST00000540865 HIKESHIQ53FT3 197 aa3.93□□□□□ -1.78
SNHG1-214ENST00000540865 KLHL26Q53HC5 615 aa3.93□□□□□ -1.78
SNHG1-214ENST00000540865 SPIN4Q56A73 249 aa3.93□□□□□ -1.78
SNHG1-214ENST00000540865 SYT14P1Q58G82 188 aa3.93□□□□□ -1.78
SNHG1-214ENST00000540865 ZNF362Q5T0B9 420 aaPredicted RBP3.93□□□□□ -1.78
SNHG1-214ENST00000540865 TSPO2Q5TGU0 170 aa3.93□□□□□ -1.78
SNHG1-214ENST00000540865 ACSM2BQ68CK6 577 aa3.93□□□□□ -1.78
SNHG1-214ENST00000540865 FAM71E1Q6IPT2 247 aa3.93□□□□□ -1.78
SNHG1-214ENST00000540865 KLC3Q6P597 504 aa3.93□□□□□ -1.78
SNHG1-214ENST00000540865 ZCCHC12Q6PEW1 402 aa3.93□□□□□ -1.78
SNHG1-214ENST00000540865 CBLN3Q6UW01 205 aa3.93□□□□□ -1.78
SNHG1-214ENST00000540865 LRIG3Q6UXM1 1119 aa3.93□□□□□ -1.78
SNHG1-214ENST00000540865 Q6ZPA2 131 aa3.93□□□□□ -1.78
SNHG1-214ENST00000540865 Q6ZRM9 215 aa3.93□□□□□ -1.78
SNHG1-214ENST00000540865 RHOUQ7L0Q8 258 aa3.93□□□□□ -1.78
SNHG1-214ENST00000540865 ABHD12BQ7Z5M8 362 aaPredicted RBP3.93□□□□□ -1.78
SNHG1-214ENST00000540865 CMC1Q7Z7K0 106 aa3.93□□□□□ -1.78
SNHG1-214ENST00000540865 ADGRG3Q86Y34 549 aa3.93□□□□□ -1.78
SNHG1-214ENST00000540865 CDK20Q8IZL9 346 aa3.93□□□□□ -1.78
SNHG1-214ENST00000540865 CENPLQ8N0S6 344 aaPredicted RBP3.93□□□□□ -1.78
SNHG1-214ENST00000540865 PTGR2Q8N8N7 351 aaPredicted RBP3.93□□□□□ -1.78
SNHG1-214ENST00000540865 POMGNT2Q8NAT1 580 aa3.93□□□□□ -1.78
SNHG1-214ENST00000540865 OR5W2Q8NH69 310 aa3.93□□□□□ -1.78
SNHG1-214ENST00000540865 MAGEE2Q8TD90 523 aaPredicted RBP3.93□□□□□ -1.78
SNHG1-214ENST00000540865 ST8SIA1Q92185 356 aa3.93□□□□□ -1.78
SNHG1-214ENST00000540865 POP5Q969H6 163 aaKnown RBP3.93□□□□□ -1.78
SNHG1-214ENST00000540865 ZNF524Q96C55 264 aa3.93□□□□□ -1.78
SNHG1-214ENST00000540865 RAB39BQ96DA2 213 aa3.93□□□□□ -1.78
SNHG1-214ENST00000540865 ARL5BQ96KC2 179 aa3.93□□□□□ -1.78
SNHG1-214ENST00000540865 DUX5Q96PT3 197 aa3.93□□□□□ -1.78
SNHG1-214ENST00000540865 RBM4BQ9BQ04 359 aaKnown RBP3.93□□□□□ -1.78
SNHG1-214ENST00000540865 IQCGQ9H095 443 aaKnown RBP3.93□□□□□ -1.78
SNHG1-214ENST00000540865 TPK1Q9H3S4 243 aa3.93□□□□□ -1.78
SNHG1-214ENST00000540865 BEX1Q9HBH7 125 aa3.93□□□□□ -1.78
SNHG1-214ENST00000540865 EQTNQ9NQ60 294 aa3.93□□□□□ -1.78
SNHG1-214ENST00000540865 MIEF1Q9NQG6 463 aa3.93□□□□□ -1.78
SNHG1-214ENST00000540865 ZNF275Q9NSD4 429 aaPredicted RBP3.93□□□□□ -1.78
SNHG1-214ENST00000540865 TMEM45AQ9NWC5 275 aa3.93□□□□□ -1.78
SNHG1-214ENST00000540865 PLEK2Q9NYT0 353 aa3.93□□□□□ -1.78
SNHG1-214ENST00000540865 CPSF2Q9P2I0 782 aaKnown RBP3.93□□□□□ -1.78
SNHG1-214ENST00000540865 NUP50Q9UKX7 468 aa3.93□□□□□ -1.78
SNHG1-214ENST00000540865 TMCO1Q9UM00 188 aa3.93□□□□□ -1.78
SNHG1-214ENST00000540865 CMAHPQ9Y471 501 aa3.93□□□□□ -1.78
SNHG1-214ENST00000540865 SPIN1Q9Y657 262 aaPredicted RBP3.93□□□□□ -1.78
SNHG1-214ENST00000540865 HERC2O95714 4834 aa3.93□□□□□ -1.78
SNHG1-214ENST00000540865 PPIAL4EA0A075B759 164 aa3.92□□□□□ -1.78
SNHG1-214ENST00000540865 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.92□□□□□ -1.78
SNHG1-214ENST00000540865 PPIAL4CA0A0B4J2A2 164 aa3.92□□□□□ -1.78
SNHG1-214ENST00000540865 TCRBV9S1A1TA0A576 114 aa3.92□□□□□ -1.78
SNHG1-214ENST00000540865 PPIAL4DF5H284 164 aa3.92□□□□□ -1.78
SNHG1-214ENST00000540865 M0R233 179 aa3.92□□□□□ -1.78
SNHG1-214ENST00000540865 MANBAO00462 879 aa3.92□□□□□ -1.78
SNHG1-214ENST00000540865 EIF1BO60739 113 aaKnown RBP3.92□□□□□ -1.78
SNHG1-214ENST00000540865 RP2O75695 350 aa3.92□□□□□ -1.78
SNHG1-214ENST00000540865 SEC31AO94979 1220 aaKnown RBP3.92□□□□□ -1.78
SNHG1-214ENST00000540865 KLHL2O95198 593 aa3.92□□□□□ -1.78
SNHG1-214ENST00000540865 GASTP01350 101 aa3.92□□□□□ -1.78
SNHG1-214ENST00000540865 IGKV3-15P01624 115 aa3.92□□□□□ -1.78
SNHG1-214ENST00000540865 KRT6AP02538 564 aa3.92□□□□□ -1.78
SNHG1-214ENST00000540865 KRT6BP04259 564 aa3.92□□□□□ -1.78
SNHG1-214ENST00000540865 AMY1AP04745 511 aa3.92□□□□□ -1.78
SNHG1-214ENST00000540865 C2P06681 752 aa3.92□□□□□ -1.78
SNHG1-214ENST00000540865 ANXA4P09525 319 aaPredicted RBP3.92□□□□□ -1.78
SNHG1-214ENST00000540865 ALOX5P09917 674 aa3.92□□□□□ -1.78
SNHG1-214ENST00000540865 PPIAL4FP0DN26 164 aa3.92□□□□□ -1.78
SNHG1-214ENST00000540865 ACP2P11117 423 aa3.92□□□□□ -1.78
SNHG1-214ENST00000540865 CHN1P15882 459 aa3.92□□□□□ -1.78
SNHG1-214ENST00000540865 CBR1P16152 277 aa3.92□□□□□ -1.78
SNHG1-214ENST00000540865 CDH2P19022 906 aaPredicted RBP3.92□□□□□ -1.78
SNHG1-214ENST00000540865 ATP6V1C1P21283 382 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms