RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-215	ENST00000540783	OR5W2	Q8NH69	310 aa		5.21	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	GNPDA2	Q8TDQ7	276 aa		5.21	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	TMEM255B	Q8WV15	326 aa		5.21	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	PTCHD1	Q96NR3	888 aa		5.21	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	DMRTA2	Q96SC8	542 aa		5.21	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	NUDT22	Q9BRQ3	303 aa		5.21	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	DEFB126	Q9BYW3	111 aa		5.21	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	REG4	Q9BYZ8	158 aa		5.21	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	ZNF768	Q9H5H4	540 aa	Known RBP	5.21	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	ISYNA1	Q9NPH2	558 aa		5.21	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	ASB6	Q9NWX5	421 aa		5.21	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	MGAT4C	Q9UBM8	478 aa		5.21	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	ADAM29	Q9UKF5	820 aa		5.21	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	COPS3	Q9UNS2	423 aa		5.21	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	RCE1	Q9Y256	329 aa		5.21	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	AK6	Q9Y3D8	172 aa	Known RBP	5.21	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	FKBP7	Q9Y680	259 aa		5.21	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	ATG2B	Q96BY7	2078 aa		5.21	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	IRGM	A1A4Y4	181 aa		5.2	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	PRR23D1	E9PI22	279 aa	Predicted RBP	5.2	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	MKRN2OS	H3BPM6	223 aa		5.2	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	CDC42EP2	O14613	210 aa		5.2	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	ARPC1B	O15143	372 aa	Known RBP	5.2	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	TPPP	O94811	219 aa		5.2	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	CYC1	P08574	325 aa		5.2	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	PRR23D2	P0DMB1	279 aa	Predicted RBP	5.2	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	PVR	P15151	417 aa		5.2	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	ATF1	P18846	271 aa		5.2	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	GSTM3	P21266	225 aa		5.2	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	MAGEB1	P43366	347 aa		5.2	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	MTNR1B	P49286	362 aa		5.2	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	AKR1D1	P51857	326 aa		5.2	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	NCBP2	P52298	156 aa	Known RBP eCLIP	5.2	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	ARFIP1	P53367	373 aa		5.2	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	OR12D2	P58182	307 aa		5.2	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	UBE2M	P61081	183 aa	Known RBP	5.2	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	ZNF311	Q5JNZ3	666 aa		5.2	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	CCNJ	Q5T5M9	372 aa		5.2	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	OR5M10	Q6IEU7	315 aa		5.2	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	FAM198B	Q6UWH4	519 aa		5.2	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	ZNF547	Q8IVP9	402 aa		5.2	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	CCDC116	Q8IYX3	515 aa		5.2	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	TMEM156	Q8N614	296 aa		5.2	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	ACBD7	Q8N6N7	88 aa		5.2	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	BOLL	Q8N9W6	283 aa	Known RBP	5.2	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	CYB561A3	Q8NBI2	242 aa		5.2	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	C1orf216	Q8TAB5	229 aa		5.2	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	ABHD4	Q8TB40	342 aa		5.2	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	ACOT12	Q8WYK0	555 aa		5.2	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	RFK	Q969G6	155 aa		5.2	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	WBP1	Q96G27	269 aa		5.2	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	PRRC1	Q96M27	445 aa		5.2	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	GPR87	Q9BY21	358 aa		5.2	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	C20orf85	Q9H1P6	137 aa		5.2	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	KLHL28	Q9NXS3	571 aa		5.2	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	RPS6KB2	Q9UBS0	482 aa		5.2	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	ZNF69	Q9UC07	566 aa		5.2	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	FBXL4	Q9UKA2	621 aa		5.2	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	5.2	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	TP53I11	O14683	189 aa		5.2	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	ARPC5	O15511	151 aa		5.2	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	KLK10	O43240	276 aa		5.2	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	AGR2	O95994	175 aa		5.2	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	HMGN2	P05204	90 aa	Known RBP	5.2	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	UCHL1	P09936	223 aa		5.2	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	ANXA7	P20073	488 aa	Known RBP	5.2	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	PYCR1	P32322	319 aa		5.2	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	GCGR	P47871	477 aa		5.2	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	CASP6	P55212	293 aa		5.2	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	MC2R	Q01718	297 aa		5.2	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	TSPAN31	Q12999	210 aa		5.2	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	FAM53B	Q14153	422 aa		5.2	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	DEFB110	Q30KQ9	67 aa		5.2	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	DEFB134	Q4QY38	66 aa		5.2	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	ACSM3	Q53FZ2	586 aa		5.2	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	C1orf189	Q5VU69	101 aa		5.2	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	KHDRBS2	Q5VWX1	349 aa	Known RBP	5.2	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	CD300LD	Q6UXZ3	194 aa		5.2	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	LINGO2	Q7L985	606 aa		5.2	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	CXXC5	Q7LFL8	322 aa	Known RBP	5.2	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	ZNF595	Q8IYB9	648 aa		5.2	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	KLHDC8A	Q8IYD2	350 aa		5.2	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	ANKRD53	Q8N9V6	530 aa		5.2	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	OR4K14	Q8NGD5	310 aa		5.2	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	ZNF671	Q8TAW3	534 aa		5.2	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	PIGX	Q8TBF5	258 aa		5.2	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	SLC22A8	Q8TCC7	542 aa		5.2	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	CNOT9	Q92600	299 aa	Known RBP	5.2	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	HGD	Q93099	445 aa		5.2	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	C5orf34	Q96MH7	638 aa		5.2	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	UBL7	Q96S82	380 aa	Predicted RBP	5.2	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	SGPP1	Q9BX95	441 aa		5.2	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	GLIPR2	Q9H4G4	154 aa		5.2	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	EXO5	Q9H790	373 aa		5.2	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	IFT46	Q9NQC8	304 aa		5.2	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	BAIAP2	Q9UQB8	552 aa		5.2	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	FARSA	Q9Y285	508 aa	Known RBP	5.2	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	HRH3	Q9Y5N1	445 aa		5.2	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	TICRR	Q7Z2Z1	1910 aa		5.2	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	MYOF	Q9NZM1	2061 aa		5.2	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms