RNA–Protein interactions for RNA: ENST00000540709.1

MDM2-227, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-227ENST00000540709 SS18L1O75177 396 aaPredicted RBP1.85□□□□□ -2.11
MDM2-227ENST00000540709 TM7SF2O76062 418 aa1.85□□□□□ -2.11
MDM2-227ENST00000540709 AP2A1O95782 977 aa1.85□□□□□ -2.11
MDM2-227ENST00000540709 IGHG4P01861 327 aa1.85□□□□□ -2.11
MDM2-227ENST00000540709 IGKV4-1P06312 121 aa1.85□□□□□ -2.11
MDM2-227ENST00000540709 GCAP28676 217 aa1.85□□□□□ -2.11
MDM2-227ENST00000540709 MDH1P40925 334 aaKnown RBP1.85□□□□□ -2.11
MDM2-227ENST00000540709 MAP3K8P41279 467 aa1.85□□□□□ -2.11
MDM2-227ENST00000540709 P2RY1P47900 373 aa1.85□□□□□ -2.11
MDM2-227ENST00000540709 UBE2AP49459 152 aa1.85□□□□□ -2.11
MDM2-227ENST00000540709 TMEM183BQ1AE95 376 aa1.85□□□□□ -2.11
MDM2-227ENST00000540709 GGTA1PQ4G0N0 100 aa1.85□□□□□ -2.11
MDM2-227ENST00000540709 BCL7AQ4VC05 210 aa1.85□□□□□ -2.11
MDM2-227ENST00000540709 COA6Q5JTJ3 125 aaKnown RBP1.85□□□□□ -2.11
MDM2-227ENST00000540709 GPRC6AQ5T6X5 926 aa1.85□□□□□ -2.11
MDM2-227ENST00000540709 HMGN2P46Q86SG4 172 aa1.85□□□□□ -2.11
MDM2-227ENST00000540709 TMEM183AQ8IXX5 376 aa1.85□□□□□ -2.11
MDM2-227ENST00000540709 OR4F15Q8NGB8 312 aa1.85□□□□□ -2.11
MDM2-227ENST00000540709 CTNNBL1Q8WYA6 563 aaPredicted RBP1.85□□□□□ -2.11
MDM2-227ENST00000540709 RMI2Q96E14 147 aa1.85□□□□□ -2.11
MDM2-227ENST00000540709 AMDHD1Q96NU7 426 aa1.85□□□□□ -2.11
MDM2-227ENST00000540709 TAAR1Q96RJ0 339 aa1.85□□□□□ -2.11
MDM2-227ENST00000540709 RIOK2Q9BVS4 552 aaKnown RBP1.85□□□□□ -2.11
MDM2-227ENST00000540709 ACTR6Q9GZN1 396 aa1.85□□□□□ -2.11
MDM2-227ENST00000540709 NHEJ1Q9H9Q4 299 aaPredicted RBP1.85□□□□□ -2.11
MDM2-227ENST00000540709 MEAF6Q9HAF1 191 aa1.85□□□□□ -2.11
MDM2-227ENST00000540709 ELOVL3Q9HB03 270 aa1.85□□□□□ -2.11
MDM2-227ENST00000540709 QPCTLQ9NXS2 382 aa1.85□□□□□ -2.11
MDM2-227ENST00000540709 SEC14L3Q9UDX4 400 aa1.85□□□□□ -2.11
MDM2-227ENST00000540709 PCSK1NQ9UHG2 260 aa1.85□□□□□ -2.11
MDM2-227ENST00000540709 YTHDF2Q9Y5A9 579 aaKnown RBP1.85□□□□□ -2.11
MDM2-227ENST00000540709 HEBP2Q9Y5Z4 205 aa1.85□□□□□ -2.11
MDM2-227ENST00000540709 NSG1A0A0A6YYJ2 146 aa1.84□□□□□ -2.11
MDM2-227ENST00000540709 A0A0G2JLM5 398 aa1.84□□□□□ -2.11
MDM2-227ENST00000540709 LRP5LA4QPB2 252 aa1.84□□□□□ -2.11
MDM2-227ENST00000540709 H3BNH8 94 aa1.84□□□□□ -2.11
MDM2-227ENST00000540709 PEX7O00628 323 aa1.84□□□□□ -2.11
MDM2-227ENST00000540709 XKRYO14609 159 aa1.84□□□□□ -2.11
MDM2-227ENST00000540709 POLR2DO15514 142 aaKnown RBP1.84□□□□□ -2.11
MDM2-227ENST00000540709 NEBLO76041 1014 aa1.84□□□□□ -2.11
MDM2-227ENST00000540709 PNMTP11086 282 aa1.84□□□□□ -2.11
MDM2-227ENST00000540709 EPB41P11171 864 aaKnown RBP1.84□□□□□ -2.11
MDM2-227ENST00000540709 NCF1P14598 390 aaPredicted RBP1.84□□□□□ -2.11
MDM2-227ENST00000540709 NPY1RP25929 384 aa1.84□□□□□ -2.11
MDM2-227ENST00000540709 CXCL5P42830 114 aa1.84□□□□□ -2.11
MDM2-227ENST00000540709 ENPEPQ07075 957 aa1.84□□□□□ -2.11
MDM2-227ENST00000540709 SELPLGQ14242 412 aa1.84□□□□□ -2.11
MDM2-227ENST00000540709 KIAA0087Q14695 138 aa1.84□□□□□ -2.11
MDM2-227ENST00000540709 GANABQ14697 944 aaKnown RBP1.84□□□□□ -2.11
MDM2-227ENST00000540709 DPYSL2Q16555 572 aa1.84□□□□□ -2.11
MDM2-227ENST00000540709 CHRFAM7AQ494W8 412 aa1.84□□□□□ -2.11
MDM2-227ENST00000540709 RIPPLY2Q5TAB7 128 aa1.84□□□□□ -2.11
MDM2-227ENST00000540709 TMEM225Q6GV28 225 aa1.84□□□□□ -2.11
MDM2-227ENST00000540709 OR52E8Q6IFG1 317 aa1.84□□□□□ -2.11
MDM2-227ENST00000540709 NANOGP8Q6NSW7 305 aa1.84□□□□□ -2.11
MDM2-227ENST00000540709 C19orf35Q6ZS72 473 aa1.84□□□□□ -2.11
MDM2-227ENST00000540709 CCDC80Q76M96 950 aa1.84□□□□□ -2.11
MDM2-227ENST00000540709 PLA2G4DQ86XP0 818 aa1.84□□□□□ -2.11
MDM2-227ENST00000540709 MMAAQ8IVH4 418 aaKnown RBP1.84□□□□□ -2.11
MDM2-227ENST00000540709 OR2L13Q8N349 312 aa1.84□□□□□ -2.11
MDM2-227ENST00000540709 ARRDC1Q8N5I2 433 aa1.84□□□□□ -2.11
MDM2-227ENST00000540709 FNDC5Q8NAU1 212 aa1.84□□□□□ -2.11
MDM2-227ENST00000540709 OR1F12Q8NHA8 337 aa1.84□□□□□ -2.11
MDM2-227ENST00000540709 SYNPRQ8TBG9 265 aa1.84□□□□□ -2.11
MDM2-227ENST00000540709 ACOT11Q8WXI4 607 aaPredicted RBP1.84□□□□□ -2.11
MDM2-227ENST00000540709 CMTM7Q96FZ5 175 aa1.84□□□□□ -2.11
MDM2-227ENST00000540709 ITCHQ96J02 903 aa1.84□□□□□ -2.11
MDM2-227ENST00000540709 NPAS2Q99743 824 aa1.84□□□□□ -2.11
MDM2-227ENST00000540709 MRPL45Q9BRJ2 306 aaKnown RBP1.84□□□□□ -2.11
MDM2-227ENST00000540709 TPPP3Q9BW30 176 aa1.84□□□□□ -2.11
MDM2-227ENST00000540709 DEFB127Q9H1M4 99 aa1.84□□□□□ -2.11
MDM2-227ENST00000540709 GBA3Q9H227 469 aa1.84□□□□□ -2.11
MDM2-227ENST00000540709 COQ10BQ9H8M1 238 aa1.84□□□□□ -2.11
MDM2-227ENST00000540709 OPN4Q9UHM6 478 aa1.84□□□□□ -2.11
MDM2-227ENST00000540709 CARMIL3Q8ND23 1372 aa1.84□□□□□ -2.12
MDM2-227ENST00000540709 A8MXQ7 604 aa1.83□□□□□ -2.12
MDM2-227ENST00000540709 RGS16O15492 202 aaPredicted RBP1.83□□□□□ -2.12
MDM2-227ENST00000540709 ENTPD5O75356 428 aa1.83□□□□□ -2.12
MDM2-227ENST00000540709 SUPT3HO75486 399 aa1.83□□□□□ -2.12
MDM2-227ENST00000540709 SCGNO76038 276 aa1.83□□□□□ -2.12
MDM2-227ENST00000540709 ATP6V1C1P21283 382 aa1.83□□□□□ -2.12
MDM2-227ENST00000540709 MMP11P24347 488 aa1.83□□□□□ -2.12
MDM2-227ENST00000540709 RPL13AP40429 203 aaKnown RBP1.83□□□□□ -2.12
MDM2-227ENST00000540709 ERVK-25P63136 954 aa1.83□□□□□ -2.12
MDM2-227ENST00000540709 HMGCS1Q01581 520 aa1.83□□□□□ -2.12
MDM2-227ENST00000540709 OXA1LQ15070 435 aa1.83□□□□□ -2.12
MDM2-227ENST00000540709 USH1GQ495M9 461 aa1.83□□□□□ -2.12
MDM2-227ENST00000540709 SLC36A3Q495N2 470 aa1.83□□□□□ -2.12
MDM2-227ENST00000540709 XKR4Q5GH76 650 aa1.83□□□□□ -2.12
MDM2-227ENST00000540709 PGAP1Q75T13 922 aa1.83□□□□□ -2.12
MDM2-227ENST00000540709 NLRP9Q7RTR0 991 aa1.83□□□□□ -2.12
MDM2-227ENST00000540709 GRAMD2AQ8IUY3 354 aa1.83□□□□□ -2.12
MDM2-227ENST00000540709 SLC38A6Q8IZM9 456 aa1.83□□□□□ -2.12
MDM2-227ENST00000540709 Q8N976 141 aa1.83□□□□□ -2.12
MDM2-227ENST00000540709 OR4D5Q8NGN0 318 aa1.83□□□□□ -2.12
MDM2-227ENST00000540709 OR2G3Q8NGZ4 309 aa1.83□□□□□ -2.12
MDM2-227ENST00000540709 SENP8Q96LD8 212 aa1.83□□□□□ -2.12
MDM2-227ENST00000540709 CLCC1Q96S66 551 aa1.83□□□□□ -2.12
MDM2-227ENST00000540709 NDFIP1Q9BT67 221 aa1.83□□□□□ -2.12
MDM2-227ENST00000540709 SRMSQ9H3Y6 488 aa1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms