RNA–Protein interactions for RNA: ENST00000540475.5

SEMA4D-223, Transcript of semaphorin 4D, human

TSL 3

Gene SEMA4D, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEMA4D-223	ENST00000540475	SON	P18583	2426 aa	Known RBP	11.44	□□□□□ -0.58
SEMA4D-223	ENST00000540475		A0A087WUJ7	227 aa		11.44	□□□□□ -0.58
SEMA4D-223	ENST00000540475		A0A1B0GWA3	101 aa		11.44	□□□□□ -0.58
SEMA4D-223	ENST00000540475	ELOA3D	A6NLF2	546 aa	Predicted RBP	11.44	□□□□□ -0.58
SEMA4D-223	ENST00000540475	ZNF587B	E7ETH6	402 aa		11.44	□□□□□ -0.58
SEMA4D-223	ENST00000540475	TPST2	O60704	377 aa		11.44	□□□□□ -0.58
SEMA4D-223	ENST00000540475	UPK3A	O75631	287 aa		11.44	□□□□□ -0.58
SEMA4D-223	ENST00000540475	IGLV1-44	P01699	117 aa		11.44	□□□□□ -0.58
SEMA4D-223	ENST00000540475	RPS5	P46782	204 aa	Known RBP	11.44	□□□□□ -0.58
SEMA4D-223	ENST00000540475	FABP6	P51161	128 aa		11.44	□□□□□ -0.58
SEMA4D-223	ENST00000540475	SH3BGR	P55822	239 aa	Predicted RBP	11.44	□□□□□ -0.58
SEMA4D-223	ENST00000540475	PCBP3	P57721	371 aa	Known RBP	11.44	□□□□□ -0.58
SEMA4D-223	ENST00000540475	MST1L	Q2TV78	715 aa		11.44	□□□□□ -0.58
SEMA4D-223	ENST00000540475	ELOA3B	Q3SY89	546 aa		11.44	□□□□□ -0.58
SEMA4D-223	ENST00000540475	TBRG1	Q3YBR2	411 aa		11.44	□□□□□ -0.58
SEMA4D-223	ENST00000540475	GLIPR1L2	Q4G1C9	344 aa		11.44	□□□□□ -0.58
SEMA4D-223	ENST00000540475	HIKESHI	Q53FT3	197 aa		11.44	□□□□□ -0.58
SEMA4D-223	ENST00000540475	AGK	Q53H12	422 aa		11.44	□□□□□ -0.58
SEMA4D-223	ENST00000540475	FAM69A	Q5T7M9	428 aa		11.44	□□□□□ -0.58
SEMA4D-223	ENST00000540475	C9orf135	Q5VTT2	229 aa		11.44	□□□□□ -0.58
SEMA4D-223	ENST00000540475	ULK3	Q6PHR2	472 aa		11.44	□□□□□ -0.58
SEMA4D-223	ENST00000540475	LINC00114	Q6XXX2	140 aa		11.44	□□□□□ -0.58
SEMA4D-223	ENST00000540475	KRT73	Q86Y46	540 aa		11.44	□□□□□ -0.58
SEMA4D-223	ENST00000540475	ELOA3	Q8NG57	546 aa		11.44	□□□□□ -0.58
SEMA4D-223	ENST00000540475	TSPEAR	Q8WU66	669 aa		11.44	□□□□□ -0.58
SEMA4D-223	ENST00000540475	CKAP2	Q8WWK9	683 aa		11.44	□□□□□ -0.58
SEMA4D-223	ENST00000540475	SLC41A3	Q96GZ6	507 aa		11.44	□□□□□ -0.58
SEMA4D-223	ENST00000540475	MAGEB18	Q96M61	343 aa		11.44	□□□□□ -0.58
SEMA4D-223	ENST00000540475	HS6ST2	Q96MM7	605 aa		11.44	□□□□□ -0.58
SEMA4D-223	ENST00000540475	CPPED1	Q9BRF8	314 aa	Predicted RBP	11.44	□□□□□ -0.58
SEMA4D-223	ENST00000540475	C1QTNF6	Q9BXI9	259 aa		11.44	□□□□□ -0.58
SEMA4D-223	ENST00000540475	RABEP2	Q9H5N1	569 aa		11.44	□□□□□ -0.58
SEMA4D-223	ENST00000540475	VIPAS39	Q9H9C1	493 aa		11.44	□□□□□ -0.58
SEMA4D-223	ENST00000540475	MOV10	Q9HCE1	1003 aa	Known RBP	11.44	□□□□□ -0.58
SEMA4D-223	ENST00000540475	TES	Q9UGI8	421 aa	Known RBP	11.44	□□□□□ -0.58
SEMA4D-223	ENST00000540475	TRAV36DV7	A0A075B6V5	113 aa		11.43	□□□□□ -0.58
SEMA4D-223	ENST00000540475		A0A0B4J2E0	115 aa		11.43	□□□□□ -0.58
SEMA4D-223	ENST00000540475	IGHV1-18	A0A0C4DH31	117 aa		11.43	□□□□□ -0.58
SEMA4D-223	ENST00000540475		A0A1B0GX12	115 aa		11.43	□□□□□ -0.58
SEMA4D-223	ENST00000540475	PRORSD1P	A6NEY8	169 aa		11.43	□□□□□ -0.58
SEMA4D-223	ENST00000540475	EVPLL	A8MZ36	301 aa		11.43	□□□□□ -0.58
SEMA4D-223	ENST00000540475	HMGB1P1	B2RPK0	211 aa	Predicted RBP	11.43	□□□□□ -0.58
SEMA4D-223	ENST00000540475	MS4A18	H0YCH9	400 aa		11.43	□□□□□ -0.58
SEMA4D-223	ENST00000540475	NR5A2	O00482	541 aa		11.43	□□□□□ -0.58
SEMA4D-223	ENST00000540475	AIM2	O14862	343 aa		11.43	□□□□□ -0.58
SEMA4D-223	ENST00000540475	TLX2	O43763	284 aa	Predicted RBP	11.43	□□□□□ -0.58
SEMA4D-223	ENST00000540475	CD5L	O43866	347 aa		11.43	□□□□□ -0.58
SEMA4D-223	ENST00000540475	CRLF1	O75462	422 aa		11.43	□□□□□ -0.58
SEMA4D-223	ENST00000540475	MFN2	O95140	757 aa		11.43	□□□□□ -0.58
SEMA4D-223	ENST00000540475	LGI1	O95970	557 aa		11.43	□□□□□ -0.58
SEMA4D-223	ENST00000540475	IGKV3-15	P01624	115 aa		11.43	□□□□□ -0.58
SEMA4D-223	ENST00000540475	ZNF43	P17038	809 aa		11.43	□□□□□ -0.58
SEMA4D-223	ENST00000540475	SLC6A2	P23975	617 aa		11.43	□□□□□ -0.58
SEMA4D-223	ENST00000540475	PCSK6	P29122	969 aa		11.43	□□□□□ -0.58
SEMA4D-223	ENST00000540475	PPP2R2B	Q00005	443 aa		11.43	□□□□□ -0.58
SEMA4D-223	ENST00000540475	LGALS3BP	Q08380	585 aa		11.43	□□□□□ -0.58
SEMA4D-223	ENST00000540475	SCARB2	Q14108	478 aa		11.43	□□□□□ -0.58
SEMA4D-223	ENST00000540475	MS4A18	Q3C1V0	323 aa		11.43	□□□□□ -0.58
SEMA4D-223	ENST00000540475	ALG10B	Q5I7T1	473 aa		11.43	□□□□□ -0.58
SEMA4D-223	ENST00000540475	SWT1	Q5T5J6	900 aa	Known RBP	11.43	□□□□□ -0.58
SEMA4D-223	ENST00000540475	NIPAL3	Q6P499	406 aa		11.43	□□□□□ -0.58
SEMA4D-223	ENST00000540475	ANKRD16	Q6P6B7	361 aa		11.43	□□□□□ -0.58
SEMA4D-223	ENST00000540475	H1FNT	Q75WM6	255 aa	Predicted RBP	11.43	□□□□□ -0.58
SEMA4D-223	ENST00000540475	PTOV1	Q86YD1	416 aa		11.43	□□□□□ -0.58
SEMA4D-223	ENST00000540475	KDM8	Q8N371	416 aa		11.43	□□□□□ -0.58
SEMA4D-223	ENST00000540475	HIPK4	Q8NE63	616 aa		11.43	□□□□□ -0.58
SEMA4D-223	ENST00000540475	SLC47A1	Q96FL8	570 aa		11.43	□□□□□ -0.58
SEMA4D-223	ENST00000540475	ANKRD27	Q96NW4	1050 aa		11.43	□□□□□ -0.58
SEMA4D-223	ENST00000540475	ZNF607	Q96SK3	696 aa		11.43	□□□□□ -0.58
SEMA4D-223	ENST00000540475	WFDC6	Q9BQY6	131 aa		11.43	□□□□□ -0.58
SEMA4D-223	ENST00000540475	KATNB1	Q9BVA0	655 aa		11.43	□□□□□ -0.58
SEMA4D-223	ENST00000540475	INTS9	Q9NV88	658 aa	Known RBP	11.43	□□□□□ -0.58
SEMA4D-223	ENST00000540475	KLHL14	Q9P2G3	628 aa		11.43	□□□□□ -0.58
SEMA4D-223	ENST00000540475	SEC14L4	Q9UDX3	406 aa		11.43	□□□□□ -0.58
SEMA4D-223	ENST00000540475	POU2F3	Q9UKI9	436 aa		11.43	□□□□□ -0.58
SEMA4D-223	ENST00000540475	ADAM21	Q9UKJ8	722 aa		11.43	□□□□□ -0.58
SEMA4D-223	ENST00000540475	MXRA5	Q9NR99	2828 aa		11.42	□□□□□ -0.58
SEMA4D-223	ENST00000540475	IGHV4-30-2	A0A087WSY4	118 aa		11.42	□□□□□ -0.58
SEMA4D-223	ENST00000540475	TRAF3IP2	O43734	574 aa	Predicted RBP	11.42	□□□□□ -0.58
SEMA4D-223	ENST00000540475	SSX4	O60224	188 aa		11.42	□□□□□ -0.58
SEMA4D-223	ENST00000540475	FMO6P	O60774	539 aa		11.42	□□□□□ -0.58
SEMA4D-223	ENST00000540475	SERPINB7	O75635	380 aa		11.42	□□□□□ -0.58
SEMA4D-223	ENST00000540475	C8B	P07358	591 aa		11.42	□□□□□ -0.58
SEMA4D-223	ENST00000540475	BMP4	P12644	408 aa		11.42	□□□□□ -0.58
SEMA4D-223	ENST00000540475	PTN	P21246	168 aa		11.42	□□□□□ -0.58
SEMA4D-223	ENST00000540475	CLDN17	P56750	224 aa		11.42	□□□□□ -0.58
SEMA4D-223	ENST00000540475	DMTN	Q08495	405 aa		11.42	□□□□□ -0.58
SEMA4D-223	ENST00000540475	RBBP4	Q09028	425 aa		11.42	□□□□□ -0.58
SEMA4D-223	ENST00000540475	MFSD13A	Q14CX5	517 aa		11.42	□□□□□ -0.58
SEMA4D-223	ENST00000540475	RAB35	Q15286	201 aa		11.42	□□□□□ -0.58
SEMA4D-223	ENST00000540475	OR1Q1	Q15612	314 aa		11.42	□□□□□ -0.58
SEMA4D-223	ENST00000540475	KLHL24	Q6TFL4	600 aa		11.42	□□□□□ -0.58
SEMA4D-223	ENST00000540475	TMEM123	Q8N131	208 aa		11.42	□□□□□ -0.58
SEMA4D-223	ENST00000540475	SCAI	Q8N9R8	606 aa		11.42	□□□□□ -0.58
SEMA4D-223	ENST00000540475	MAPK1IP1L	Q8NDC0	245 aa		11.42	□□□□□ -0.58
SEMA4D-223	ENST00000540475	SLC25A36	Q96CQ1	311 aa		11.42	□□□□□ -0.58
SEMA4D-223	ENST00000540475	LRR1	Q96L50	414 aa		11.42	□□□□□ -0.58
SEMA4D-223	ENST00000540475	ALKBH3	Q96Q83	286 aa	Predicted RBP	11.42	□□□□□ -0.58
SEMA4D-223	ENST00000540475	SLC38A2	Q96QD8	506 aa		11.42	□□□□□ -0.58
SEMA4D-223	ENST00000540475	RHNO1	Q9BSD3	238 aa		11.42	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms