RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 TAS2R5Q9NYW4 299 aa16.93■□□□□ 0.3
TNFRSF1A-213ENST00000540022 IL20Q9NYY1 176 aa16.93■□□□□ 0.3
TNFRSF1A-213ENST00000540022 ORC6Q9Y5N6 252 aa16.93■□□□□ 0.3
TNFRSF1A-213ENST00000540022 CDH10Q9Y6N8 788 aa16.93■□□□□ 0.3
TNFRSF1A-213ENST00000540022 IGHV3-15A0A0B4J1V0 119 aa16.92■□□□□ 0.3
TNFRSF1A-213ENST00000540022 OR14I1A6ND48 311 aa16.92■□□□□ 0.3
TNFRSF1A-213ENST00000540022 H3BN98 237 aa16.92■□□□□ 0.3
TNFRSF1A-213ENST00000540022 PLPP3O14495 311 aa16.92■□□□□ 0.3
TNFRSF1A-213ENST00000540022 DNPH1O43598 174 aa16.92■□□□□ 0.3
TNFRSF1A-213ENST00000540022 RAMP1O60894 148 aa16.92■□□□□ 0.3
TNFRSF1A-213ENST00000540022 ENPP1P22413 925 aa16.92■□□□□ 0.3
TNFRSF1A-213ENST00000540022 AGFG1P52594 562 aaKnown RBP16.92■□□□□ 0.3
TNFRSF1A-213ENST00000540022 CRISP1P54107 249 aa16.92■□□□□ 0.3
TNFRSF1A-213ENST00000540022 RPS3AP61247 264 aaKnown RBP16.92■□□□□ 0.3
TNFRSF1A-213ENST00000540022 RPL18Q07020 188 aaKnown RBP16.92■□□□□ 0.3
TNFRSF1A-213ENST00000540022 PAQR6Q6TCH4 344 aa16.92■□□□□ 0.3
TNFRSF1A-213ENST00000540022 Q6ZPB1 254 aaPredicted RBP16.92■□□□□ 0.3
TNFRSF1A-213ENST00000540022 CLDN22Q8N7P3 220 aa16.92■□□□□ 0.3
TNFRSF1A-213ENST00000540022 FANK1Q8TC84 345 aa16.92■□□□□ 0.3
TNFRSF1A-213ENST00000540022 SAMD8Q96LT4 415 aa16.92■□□□□ 0.3
TNFRSF1A-213ENST00000540022 RDH12Q96NR8 316 aa16.92■□□□□ 0.3
TNFRSF1A-213ENST00000540022 UCN2Q96RP3 112 aa16.92■□□□□ 0.3
TNFRSF1A-213ENST00000540022 GABARAPL3Q9BY60 117 aa16.92■□□□□ 0.3
TNFRSF1A-213ENST00000540022 B3GALT5Q9Y2C3 310 aa16.92■□□□□ 0.3
TNFRSF1A-213ENST00000540022 PTPN13Q12923 2485 aa16.92■□□□□ 0.3
TNFRSF1A-213ENST00000540022 SVILO95425 2214 aa16.92■□□□□ 0.3
TNFRSF1A-213ENST00000540022 FREM3P0C091 2139 aa16.92■□□□□ 0.3
TNFRSF1A-213ENST00000540022 H0YJX3 145 aa16.91■□□□□ 0.3
TNFRSF1A-213ENST00000540022 SMAD9O15198 467 aaKnown RBP16.91■□□□□ 0.3
TNFRSF1A-213ENST00000540022 EIF1BO60739 113 aaKnown RBP16.91■□□□□ 0.3
TNFRSF1A-213ENST00000540022 NDUFB2O95178 105 aa16.91■□□□□ 0.3
TNFRSF1A-213ENST00000540022 RCBTB2O95199 551 aa16.91■□□□□ 0.3
TNFRSF1A-213ENST00000540022 ADORA3P0DMS8 318 aa16.91■□□□□ 0.3
TNFRSF1A-213ENST00000540022 CDH2P19022 906 aaPredicted RBP16.91■□□□□ 0.3
TNFRSF1A-213ENST00000540022 POU1F1P28069 291 aa16.91■□□□□ 0.3
TNFRSF1A-213ENST00000540022 PTGS2P35354 604 aa16.91■□□□□ 0.3
TNFRSF1A-213ENST00000540022 ESRRGP62508 458 aa16.91■□□□□ 0.3
TNFRSF1A-213ENST00000540022 NPRL3Q12980 569 aa16.91■□□□□ 0.3
TNFRSF1A-213ENST00000540022 ANKDD1AQ495B1 522 aa16.91■□□□□ 0.3
TNFRSF1A-213ENST00000540022 SMARCD3Q6STE5 483 aa16.91■□□□□ 0.3
TNFRSF1A-213ENST00000540022 CCDC103Q8IW40 242 aa16.91■□□□□ 0.3
TNFRSF1A-213ENST00000540022 KDM8Q8N371 416 aa16.91■□□□□ 0.3
TNFRSF1A-213ENST00000540022 LRRC75AQ8NAA5 344 aa16.91■□□□□ 0.3
TNFRSF1A-213ENST00000540022 OR5M9Q8NGP3 310 aa16.91■□□□□ 0.3
TNFRSF1A-213ENST00000540022 CPNE4Q96A23 557 aaPredicted RBP16.91■□□□□ 0.3
TNFRSF1A-213ENST00000540022 TUBA1CQ9BQE3 449 aa16.91■□□□□ 0.3
TNFRSF1A-213ENST00000540022 TIGARQ9NQ88 270 aa16.91■□□□□ 0.3
TNFRSF1A-213ENST00000540022 SETXQ7Z333 2677 aaKnown RBP16.91■□□□□ 0.3
TNFRSF1A-213ENST00000540022 HIVEP3Q5T1R4 2406 aa16.91■□□□□ 0.3
TNFRSF1A-213ENST00000540022 AQP7P3A6NL99 342 aa16.91■□□□□ 0.3
TNFRSF1A-213ENST00000540022 MCIDASD6RGH6 385 aa16.91■□□□□ 0.3
TNFRSF1A-213ENST00000540022 MS4A18H0YCH9 400 aa16.91■□□□□ 0.3
TNFRSF1A-213ENST00000540022 PRPS1P60891 318 aa16.91■□□□□ 0.3
TNFRSF1A-213ENST00000540022 ZNF239Q16600 458 aaKnown RBP16.91■□□□□ 0.3
TNFRSF1A-213ENST00000540022 MS4A18Q3C1V0 323 aa16.91■□□□□ 0.3
TNFRSF1A-213ENST00000540022 CLEC12AQ5QGZ9 265 aa16.91■□□□□ 0.3
TNFRSF1A-213ENST00000540022 WLSQ5T9L3 541 aa16.91■□□□□ 0.3
TNFRSF1A-213ENST00000540022 PLXDC2Q6UX71 529 aa16.91■□□□□ 0.3
TNFRSF1A-213ENST00000540022 IGFN1Q86VF2 1251 aa16.91■□□□□ 0.3
TNFRSF1A-213ENST00000540022 PM20D2Q8IYS1 436 aa16.91■□□□□ 0.3
TNFRSF1A-213ENST00000540022 ADPRHL1Q8NDY3 354 aa16.91■□□□□ 0.3
TNFRSF1A-213ENST00000540022 ROBO4Q8WZ75 1007 aa16.91■□□□□ 0.3
TNFRSF1A-213ENST00000540022 ZHX1-C8orf76Q96EF9 292 aa16.91■□□□□ 0.3
TNFRSF1A-213ENST00000540022 TSSK6Q9BXA6 273 aa16.91■□□□□ 0.3
TNFRSF1A-213ENST00000540022 PNPLA3Q9NST1 481 aa16.91■□□□□ 0.3
TNFRSF1A-213ENST00000540022 PAQR5Q9NXK6 330 aaPredicted RBP16.91■□□□□ 0.3
TNFRSF1A-213ENST00000540022 ENOPH1Q9UHY7 261 aa16.91■□□□□ 0.3
TNFRSF1A-213ENST00000540022 C11orf98E9PRG8 122 aa16.9■□□□□ 0.3
TNFRSF1A-213ENST00000540022 BCKDKO14874 412 aa16.9■□□□□ 0.3
TNFRSF1A-213ENST00000540022 OR6A2O95222 327 aa16.9■□□□□ 0.3
TNFRSF1A-213ENST00000540022 F13BP05160 661 aa16.9■□□□□ 0.3
TNFRSF1A-213ENST00000540022 AHCYP23526 432 aa16.9■□□□□ 0.3
TNFRSF1A-213ENST00000540022 PUDPQ08623 228 aa16.9■□□□□ 0.3
TNFRSF1A-213ENST00000540022 ZP4Q12836 540 aa16.9■□□□□ 0.3
TNFRSF1A-213ENST00000540022 PON3Q15166 354 aa16.9■□□□□ 0.3
TNFRSF1A-213ENST00000540022 PTGES3Q15185 160 aaKnown RBP16.9■□□□□ 0.3
TNFRSF1A-213ENST00000540022 ALG10Q5BKT4 473 aa16.9■□□□□ 0.3
TNFRSF1A-213ENST00000540022 TMEM236Q5W0B7 351 aa16.9■□□□□ 0.3
TNFRSF1A-213ENST00000540022 RPL13AP3Q6NVV1 102 aa16.9■□□□□ 0.3
TNFRSF1A-213ENST00000540022 GFRALQ6UXV0 394 aa16.9■□□□□ 0.3
TNFRSF1A-213ENST00000540022 TEX47Q8TBZ9 253 aa16.9■□□□□ 0.3
TNFRSF1A-213ENST00000540022 NAA11Q9BSU3 229 aaPredicted RBP16.9■□□□□ 0.3
TNFRSF1A-213ENST00000540022 GRIP2Q9C0E4 1043 aa16.9■□□□□ 0.3
TNFRSF1A-213ENST00000540022 TBC1D23Q9NUY8 699 aa16.9■□□□□ 0.3
TNFRSF1A-213ENST00000540022 FAM118AQ9NWS6 357 aa16.9■□□□□ 0.3
TNFRSF1A-213ENST00000540022 B3GAT1Q9P2W7 334 aa16.9■□□□□ 0.3
TNFRSF1A-213ENST00000540022 LRRK2Q5S007 2527 aa16.9■□□□□ 0.3
TNFRSF1A-213ENST00000540022 ZGRF1Q86YA3 2104 aa16.89■□□□□ 0.29
TNFRSF1A-213ENST00000540022 E9PQ18 207 aa16.89■□□□□ 0.29
TNFRSF1A-213ENST00000540022 RNF13O43567 381 aa16.89■□□□□ 0.29
TNFRSF1A-213ENST00000540022 EMC4Q5J8M3 183 aa16.89■□□□□ 0.29
TNFRSF1A-213ENST00000540022 TMEM225Q6GV28 225 aa16.89■□□□□ 0.29
TNFRSF1A-213ENST00000540022 CHMP1BQ7LBR1 199 aa16.89■□□□□ 0.29
TNFRSF1A-213ENST00000540022 ADGRE4PQ86SQ3 457 aa16.89■□□□□ 0.29
TNFRSF1A-213ENST00000540022 IQCF1Q8N6M8 205 aa16.89■□□□□ 0.29
TNFRSF1A-213ENST00000540022 ZPLD1Q8TCW7 415 aa16.89■□□□□ 0.29
TNFRSF1A-213ENST00000540022 ZNF570Q96NI8 536 aa16.89■□□□□ 0.29
TNFRSF1A-213ENST00000540022 ADI1Q9BV57 179 aa16.89■□□□□ 0.29
TNFRSF1A-213ENST00000540022 FANCFQ9NPI8 374 aa16.89■□□□□ 0.29
TNFRSF1A-213ENST00000540022 KLHL13Q9P2N7 655 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms