RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 OR6S1Q8NH40 331 aa15.3■□□□□ 0.04
COPS3-212ENST00000539941 PAQR8Q8TEZ7 354 aa15.3■□□□□ 0.04
COPS3-212ENST00000539941 NKD1Q969G9 470 aa15.3■□□□□ 0.04
COPS3-212ENST00000539941 NTNG2Q96CW9 530 aa15.3■□□□□ 0.04
COPS3-212ENST00000539941 TMEM80Q96HE8 168 aa15.3■□□□□ 0.04
COPS3-212ENST00000539941 HPF1Q9NWY4 346 aa15.3■□□□□ 0.04
COPS3-212ENST00000539941 MED11Q9P086 117 aa15.3■□□□□ 0.04
COPS3-212ENST00000539941 SLC6A5Q9Y345 797 aa15.3■□□□□ 0.04
COPS3-212ENST00000539941 MPDZO75970 2070 aa15.29■□□□□ 0.04
COPS3-212ENST00000539941 AHCTF1Q8WYP5 2266 aa15.29■□□□□ 0.04
COPS3-212ENST00000539941 ARPC3O15145 178 aa15.29■□□□□ 0.04
COPS3-212ENST00000539941 NPIPB7O75200 414 aa15.29■□□□□ 0.04
COPS3-212ENST00000539941 INMTO95050 263 aa15.29■□□□□ 0.04
COPS3-212ENST00000539941 PPP1R3DO95685 299 aa15.29■□□□□ 0.04
COPS3-212ENST00000539941 BMP4P12644 408 aa15.29■□□□□ 0.04
COPS3-212ENST00000539941 ZNF3P17036 446 aa15.29■□□□□ 0.04
COPS3-212ENST00000539941 ACVR2AP27037 513 aa15.29■□□□□ 0.04
COPS3-212ENST00000539941 P2RX3P56373 397 aa15.29■□□□□ 0.04
COPS3-212ENST00000539941 DEFA1P59665 94 aa15.29■□□□□ 0.04
COPS3-212ENST00000539941 DEFA3P59666 94 aa15.29■□□□□ 0.04
COPS3-212ENST00000539941 IFITM3Q01628 133 aa15.29■□□□□ 0.04
COPS3-212ENST00000539941 RAB40BQ12829 278 aa15.29■□□□□ 0.04
COPS3-212ENST00000539941 CDK10Q15131 360 aa15.29■□□□□ 0.04
COPS3-212ENST00000539941 FCRLBQ6BAA4 426 aa15.29■□□□□ 0.04
COPS3-212ENST00000539941 OR5M10Q6IEU7 315 aa15.29■□□□□ 0.04
COPS3-212ENST00000539941 CXXC5Q7LFL8 322 aaKnown RBP15.29■□□□□ 0.04
COPS3-212ENST00000539941 BCDIN3DQ7Z5W3 292 aaKnown RBP15.29■□□□□ 0.04
COPS3-212ENST00000539941 DTX1Q86Y01 620 aa15.29■□□□□ 0.04
COPS3-212ENST00000539941 IL22RA1Q8N6P7 574 aa15.29■□□□□ 0.04
COPS3-212ENST00000539941 LRRC17Q8N6Y2 441 aa15.29■□□□□ 0.04
COPS3-212ENST00000539941 FADS6Q8N9I5 356 aa15.29■□□□□ 0.04
COPS3-212ENST00000539941 ADAMTS14Q8WXS8 1223 aa15.29■□□□□ 0.04
COPS3-212ENST00000539941 KTI12Q96EK9 354 aaPredicted RBP15.29■□□□□ 0.04
COPS3-212ENST00000539941 MRGPRX4Q96LA9 322 aa15.29■□□□□ 0.04
COPS3-212ENST00000539941 ANGPTL4Q9BY76 406 aa15.29■□□□□ 0.04
COPS3-212ENST00000539941 H2AFY2Q9P0M6 372 aaPredicted RBP15.29■□□□□ 0.04
COPS3-212ENST00000539941 CHRNA9Q9UGM1 479 aa15.29■□□□□ 0.04
COPS3-212ENST00000539941 KLHL21Q9UJP4 597 aa15.29■□□□□ 0.04
COPS3-212ENST00000539941 PCNX3Q9H6A9 2034 aa15.29■□□□□ 0.04
COPS3-212ENST00000539941 FRYQ5TBA9 3013 aa15.29■□□□□ 0.04
COPS3-212ENST00000539941 TMEM72A0PK05 275 aa15.28■□□□□ 0.04
COPS3-212ENST00000539941 C2orf72A6NCS6 295 aa15.28■□□□□ 0.04
COPS3-212ENST00000539941 LRRN3E7EW58 273 aa15.28■□□□□ 0.04
COPS3-212ENST00000539941 APOA1P02647 267 aa15.28■□□□□ 0.04
COPS3-212ENST00000539941 BGLAPP02818 100 aa15.28■□□□□ 0.04
COPS3-212ENST00000539941 TSPAN19P0C672 248 aa15.28■□□□□ 0.04
COPS3-212ENST00000539941 TRAPPC2P0DI81 140 aa15.28■□□□□ 0.04
COPS3-212ENST00000539941 TRAPPC2BP0DI82 140 aa15.28■□□□□ 0.04
COPS3-212ENST00000539941 APEHP13798 732 aaKnown RBP15.28■□□□□ 0.04
COPS3-212ENST00000539941 PRKACBP22694 351 aa15.28■□□□□ 0.04
COPS3-212ENST00000539941 NOS3P29474 1203 aa15.28■□□□□ 0.04
COPS3-212ENST00000539941 HTR1FP30939 366 aa15.28■□□□□ 0.04
COPS3-212ENST00000539941 MTNR1AP48039 350 aa15.28■□□□□ 0.04
COPS3-212ENST00000539941 ST13P50502 369 aaKnown RBP15.28■□□□□ 0.04
COPS3-212ENST00000539941 GP2P55259 537 aaKnown RBP15.28■□□□□ 0.04
COPS3-212ENST00000539941 CDH11P55287 796 aa15.28■□□□□ 0.04
COPS3-212ENST00000539941 AQP6Q13520 282 aa15.28■□□□□ 0.04
COPS3-212ENST00000539941 CTF1Q16619 201 aa15.28■□□□□ 0.04
COPS3-212ENST00000539941 ARMC4Q5T2S8 1044 aa15.28■□□□□ 0.04
COPS3-212ENST00000539941 FAM69AQ5T7M9 428 aa15.28■□□□□ 0.04
COPS3-212ENST00000539941 SLC22A10Q63ZE4 541 aa15.28■□□□□ 0.04
COPS3-212ENST00000539941 OR2M3Q8NG83 312 aa15.28■□□□□ 0.04
COPS3-212ENST00000539941 TAAR8Q969N4 342 aa15.28■□□□□ 0.04
COPS3-212ENST00000539941 KIAA1143Q96AT1 154 aaPredicted RBP15.28■□□□□ 0.04
COPS3-212ENST00000539941 MOGAT1Q96PD6 335 aa15.28■□□□□ 0.04
COPS3-212ENST00000539941 PTGES2Q9H7Z7 377 aa15.28■□□□□ 0.04
COPS3-212ENST00000539941 NRIP3Q9NQ35 241 aa15.28■□□□□ 0.04
COPS3-212ENST00000539941 HINT3Q9NQE9 182 aaKnown RBP15.28■□□□□ 0.04
COPS3-212ENST00000539941 DIMT1Q9UNQ2 313 aaKnown RBP15.28■□□□□ 0.04
COPS3-212ENST00000539941 CEP295Q9C0D2 2601 aa15.28■□□□□ 0.04
COPS3-212ENST00000539941 EPG5Q9HCE0 2579 aa15.28■□□□□ 0.04
COPS3-212ENST00000539941 B4DXG7 233 aa15.28■□□□□ 0.04
COPS3-212ENST00000539941 B8ZZF3 427 aa15.28■□□□□ 0.04
COPS3-212ENST00000539941 ZNF208O43345 1280 aa15.28■□□□□ 0.04
COPS3-212ENST00000539941 OR2T1O43869 369 aa15.28■□□□□ 0.04
COPS3-212ENST00000539941 CCNKO75909 580 aa15.28■□□□□ 0.04
COPS3-212ENST00000539941 SLC2A10O95528 541 aa15.28■□□□□ 0.04
COPS3-212ENST00000539941 HIST1H2ABP04908 130 aa15.28■□□□□ 0.04
COPS3-212ENST00000539941 NR4A1P22736 598 aa15.28■□□□□ 0.04
COPS3-212ENST00000539941 UQCRC1P31930 480 aa15.28■□□□□ 0.04
COPS3-212ENST00000539941 RPL4P36578 427 aaKnown RBP15.28■□□□□ 0.04
COPS3-212ENST00000539941 PLPPR5Q32ZL2 321 aa15.28■□□□□ 0.04
COPS3-212ENST00000539941 C1orf140Q5VVS0 124 aa15.28■□□□□ 0.04
COPS3-212ENST00000539941 RFPL4BQ6ZWI9 263 aa15.28■□□□□ 0.04
COPS3-212ENST00000539941 HIST3H2AQ7L7L0 130 aa15.28■□□□□ 0.04
COPS3-212ENST00000539941 MAMDC2Q7Z304 686 aaPredicted RBP15.28■□□□□ 0.04
COPS3-212ENST00000539941 BTLAQ7Z6A9 289 aa15.28■□□□□ 0.04
COPS3-212ENST00000539941 CPOQ8IVL8 374 aa15.28■□□□□ 0.04
COPS3-212ENST00000539941 OR4K17Q8NGC6 315 aa15.28■□□□□ 0.04
COPS3-212ENST00000539941 HIST1H2ACQ93077 130 aa15.28■□□□□ 0.04
COPS3-212ENST00000539941 RNFT2Q96EX2 444 aa15.28■□□□□ 0.04
COPS3-212ENST00000539941 ERMAPQ96PL5 475 aaPredicted RBP15.28■□□□□ 0.04
COPS3-212ENST00000539941 FGF20Q9NP95 211 aaPredicted RBP15.28■□□□□ 0.04
COPS3-212ENST00000539941 A0A087WZY1 265 aa15.27■□□□□ 0.03
COPS3-212ENST00000539941 MCIDASD6RGH6 385 aa15.27■□□□□ 0.03
COPS3-212ENST00000539941 IMPA2O14732 288 aa15.27■□□□□ 0.03
COPS3-212ENST00000539941 ICMTO60725 284 aa15.27■□□□□ 0.03
COPS3-212ENST00000539941 AHSA1O95433 338 aa15.27■□□□□ 0.03
COPS3-212ENST00000539941 RAB36O95755 333 aa15.27■□□□□ 0.03
COPS3-212ENST00000539941 ADORA3P0DMS8 318 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms