RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 ARSJQ5FYB0 599 aaPredicted RBP11.6□□□□□ -0.55
DDX55-206ENST00000539934 CASP12Q6UXS9 341 aa11.6□□□□□ -0.55
DDX55-206ENST00000539934 ABI3BPQ7Z7G0 1075 aa11.6□□□□□ -0.55
DDX55-206ENST00000539934 S100A7AQ86SG5 101 aa11.6□□□□□ -0.55
DDX55-206ENST00000539934 MIER2Q8N344 545 aa11.6□□□□□ -0.55
DDX55-206ENST00000539934 ACOT12Q8WYK0 555 aa11.6□□□□□ -0.55
DDX55-206ENST00000539934 RORBQ92753 470 aa11.6□□□□□ -0.55
DDX55-206ENST00000539934 SLCO4A1Q96BD0 722 aa11.6□□□□□ -0.55
DDX55-206ENST00000539934 TAAR6Q96RI8 345 aa11.6□□□□□ -0.55
DDX55-206ENST00000539934 REPIN1Q9BWE0 567 aaKnown RBP11.6□□□□□ -0.55
DDX55-206ENST00000539934 ANGPTL4Q9BY76 406 aa11.6□□□□□ -0.55
DDX55-206ENST00000539934 RBCK1Q9BYM8 510 aa11.6□□□□□ -0.55
DDX55-206ENST00000539934 PRSS16Q9NQE7 514 aa11.6□□□□□ -0.55
DDX55-206ENST00000539934 TMEM140Q9NV12 185 aa11.6□□□□□ -0.55
DDX55-206ENST00000539934 USE1Q9NZ43 259 aa11.6□□□□□ -0.55
DDX55-206ENST00000539934 PDE10AQ9Y233 779 aa11.6□□□□□ -0.55
DDX55-206ENST00000539934 SLCO1B1Q9Y6L6 691 aa11.6□□□□□ -0.55
DDX55-206ENST00000539934 CCDC187A0A096LP49 1063 aa11.59□□□□□ -0.55
DDX55-206ENST00000539934 F5H0A9 414 aaPredicted RBP11.59□□□□□ -0.55
DDX55-206ENST00000539934 M0R143 59 aa11.59□□□□□ -0.55
DDX55-206ENST00000539934 STK16O75716 305 aa11.59□□□□□ -0.55
DDX55-206ENST00000539934 GPR1P46091 355 aa11.59□□□□□ -0.55
DDX55-206ENST00000539934 MC1RQ01726 317 aa11.59□□□□□ -0.55
DDX55-206ENST00000539934 XKR7Q5GH72 579 aa11.59□□□□□ -0.55
DDX55-206ENST00000539934 PMS2CLQ68D20 193 aa11.59□□□□□ -0.55
DDX55-206ENST00000539934 TMEM88Q6PEY1 159 aa11.59□□□□□ -0.55
DDX55-206ENST00000539934 BTNL3Q6UXE8 466 aa11.59□□□□□ -0.55
DDX55-206ENST00000539934 SLC29A4Q7RTT9 530 aa11.59□□□□□ -0.55
DDX55-206ENST00000539934 CACUL1Q86Y37 369 aa11.59□□□□□ -0.55
DDX55-206ENST00000539934 UBTD2Q8WUN7 234 aa11.59□□□□□ -0.55
DDX55-206ENST00000539934 TSEN15Q8WW01 171 aaKnown RBP11.59□□□□□ -0.55
DDX55-206ENST00000539934 HSD17B8Q92506 261 aa11.59□□□□□ -0.55
DDX55-206ENST00000539934 MRGPRFQ96AM1 343 aa11.59□□□□□ -0.55
DDX55-206ENST00000539934 TMEM159Q96B96 161 aa11.59□□□□□ -0.55
DDX55-206ENST00000539934 PIGQQ9BRB3 760 aa11.59□□□□□ -0.55
DDX55-206ENST00000539934 MFRPQ9BY79 579 aa11.59□□□□□ -0.55
DDX55-206ENST00000539934 CHST5Q9GZS9 411 aa11.59□□□□□ -0.55
DDX55-206ENST00000539934 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.59□□□□□ -0.55
DDX55-206ENST00000539934 SMPXQ9UHP9 88 aa11.59□□□□□ -0.55
DDX55-206ENST00000539934 PCDHB11Q9Y5F2 797 aa11.59□□□□□ -0.55
DDX55-206ENST00000539934 ADAMTS20P59510 1910 aa11.59□□□□□ -0.55
DDX55-206ENST00000539934 ATMQ13315 3056 aa11.59□□□□□ -0.55
DDX55-206ENST00000539934 A4D1N5 150 aa11.59□□□□□ -0.55
DDX55-206ENST00000539934 EFCAB9A8MZ26 197 aa11.59□□□□□ -0.55
DDX55-206ENST00000539934 GPIP06744 558 aa11.59□□□□□ -0.55
DDX55-206ENST00000539934 WASP42768 502 aa11.59□□□□□ -0.55
DDX55-206ENST00000539934 CDH11P55287 796 aa11.59□□□□□ -0.55
DDX55-206ENST00000539934 SURF2Q15527 256 aaPredicted RBP11.59□□□□□ -0.55
DDX55-206ENST00000539934 C3P1Q6ZMU1 363 aa11.59□□□□□ -0.55
DDX55-206ENST00000539934 SPATA19Q7Z5L4 167 aa11.59□□□□□ -0.55
DDX55-206ENST00000539934 PDZD3Q86UT5 571 aa11.59□□□□□ -0.55
DDX55-206ENST00000539934 DUSP18Q8NEJ0 188 aa11.59□□□□□ -0.55
DDX55-206ENST00000539934 TSTD1Q8NFU3 115 aa11.59□□□□□ -0.55
DDX55-206ENST00000539934 OR5R1Q8NH85 324 aa11.59□□□□□ -0.55
DDX55-206ENST00000539934 CXorf40AQ8TE69 158 aa11.59□□□□□ -0.55
DDX55-206ENST00000539934 SCARB1Q8WTV0 552 aa11.59□□□□□ -0.55
DDX55-206ENST00000539934 ASB11Q8WXH4 323 aa11.59□□□□□ -0.55
DDX55-206ENST00000539934 BBC3Q96PG8 261 aaPredicted RBP11.59□□□□□ -0.55
DDX55-206ENST00000539934 TSPAN10Q9H1Z9 355 aaPredicted RBP11.59□□□□□ -0.55
DDX55-206ENST00000539934 DKKL1Q9UK85 242 aa11.59□□□□□ -0.55
DDX55-206ENST00000539934 PACSIN3Q9UKS6 424 aa11.59□□□□□ -0.55
DDX55-206ENST00000539934 MGAQ8IWI9 3026 aa11.58□□□□□ -0.56
DDX55-206ENST00000539934 hCG_1809904A0A1W2PP81 198 aa11.58□□□□□ -0.56
DDX55-206ENST00000539934 A0A1W2PPE2 198 aa11.58□□□□□ -0.56
DDX55-206ENST00000539934 A0A1W2PR64 198 aa11.58□□□□□ -0.56
DDX55-206ENST00000539934 SLC16A5O15375 505 aa11.58□□□□□ -0.56
DDX55-206ENST00000539934 STAG3L2P0CL84 134 aa11.58□□□□□ -0.56
DDX55-206ENST00000539934 GPX3P22352 226 aa11.58□□□□□ -0.56
DDX55-206ENST00000539934 GLRA1P23415 457 aa11.58□□□□□ -0.56
DDX55-206ENST00000539934 PRLHRP49683 370 aa11.58□□□□□ -0.56
DDX55-206ENST00000539934 HTR6P50406 440 aa11.58□□□□□ -0.56
DDX55-206ENST00000539934 SHBQ15464 509 aa11.58□□□□□ -0.56
DDX55-206ENST00000539934 TCEA2Q15560 299 aa11.58□□□□□ -0.56
DDX55-206ENST00000539934 ATP6AP1LQ52LC2 224 aa11.58□□□□□ -0.56
DDX55-206ENST00000539934 TMEM220Q6QAJ8 160 aa11.58□□□□□ -0.56
DDX55-206ENST00000539934 SYT13Q7L8C5 426 aa11.58□□□□□ -0.56
DDX55-206ENST00000539934 ZNF655Q8N720 491 aaPredicted RBP11.58□□□□□ -0.56
DDX55-206ENST00000539934 MITD1Q8WV92 249 aa11.58□□□□□ -0.56
DDX55-206ENST00000539934 ERMAPQ96PL5 475 aaPredicted RBP11.58□□□□□ -0.56
DDX55-206ENST00000539934 GPR87Q9BY21 358 aa11.58□□□□□ -0.56
DDX55-206ENST00000539934 SCN3BQ9NY72 215 aa11.58□□□□□ -0.56
DDX55-206ENST00000539934 TMEM202A6NGA9 273 aa11.58□□□□□ -0.56
DDX55-206ENST00000539934 MRASO14807 208 aa11.58□□□□□ -0.56
DDX55-206ENST00000539934 CA11O75493 328 aa11.58□□□□□ -0.56
DDX55-206ENST00000539934 OR2J2O76002 312 aa11.58□□□□□ -0.56
DDX55-206ENST00000539934 KDM4BO94953 1096 aa11.58□□□□□ -0.56
DDX55-206ENST00000539934 MT-ND5P03915 603 aa11.58□□□□□ -0.56
DDX55-206ENST00000539934 F13BP05160 661 aa11.58□□□□□ -0.56
DDX55-206ENST00000539934 CLEC3BP05452 202 aa11.58□□□□□ -0.56
DDX55-206ENST00000539934 SNRPCP09234 159 aaKnown RBP11.58□□□□□ -0.56
DDX55-206ENST00000539934 GABRA1P14867 456 aa11.58□□□□□ -0.56
DDX55-206ENST00000539934 S100A2P29034 98 aa11.58□□□□□ -0.56
DDX55-206ENST00000539934 P2RY2P41231 377 aa11.58□□□□□ -0.56
DDX55-206ENST00000539934 DIO3P55073 304 aa11.58□□□□□ -0.56
DDX55-206ENST00000539934 CLDN20P56880 219 aa11.58□□□□□ -0.56
DDX55-206ENST00000539934 ERVS71-1P61550 626 aa11.58□□□□□ -0.56
DDX55-206ENST00000539934 MVKQ03426 396 aa11.58□□□□□ -0.56
DDX55-206ENST00000539934 ISXQ2M1V0 245 aa11.58□□□□□ -0.56
DDX55-206ENST00000539934 C5orf64Q2M2E5 130 aa11.58□□□□□ -0.56
DDX55-206ENST00000539934 TMEM52BQ4KMG9 183 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms