RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 SERPINB7O75635 380 aa13.11□□□□□ -0.31
RAB40B-202ENST00000538809 KRT33AO76009 404 aa13.11□□□□□ -0.31
RAB40B-202ENST00000538809 CD8AP01732 235 aa13.11□□□□□ -0.31
RAB40B-202ENST00000538809 IGHV4-39P01824 125 aa13.11□□□□□ -0.31
RAB40B-202ENST00000538809 OPN1SWP03999 348 aa13.11□□□□□ -0.31
RAB40B-202ENST00000538809 CBLP22681 906 aa13.11□□□□□ -0.31
RAB40B-202ENST00000538809 PTAFRP25105 342 aa13.11□□□□□ -0.31
RAB40B-202ENST00000538809 PCGF2P35227 344 aa13.11□□□□□ -0.31
RAB40B-202ENST00000538809 CRYBA2P53672 197 aa13.11□□□□□ -0.31
RAB40B-202ENST00000538809 TGFBR3Q03167 851 aa13.11□□□□□ -0.31
RAB40B-202ENST00000538809 TNK1Q13470 666 aa13.11□□□□□ -0.31
RAB40B-202ENST00000538809 NRF1Q16656 503 aa13.11□□□□□ -0.31
RAB40B-202ENST00000538809 DUSP7Q16829 419 aa13.11□□□□□ -0.31
RAB40B-202ENST00000538809 CYP51A1Q16850 503 aa13.11□□□□□ -0.31
RAB40B-202ENST00000538809 CLEC12BQ2HXU8 276 aa13.11□□□□□ -0.31
RAB40B-202ENST00000538809 HIKESHIQ53FT3 197 aa13.11□□□□□ -0.31
RAB40B-202ENST00000538809 ALG10BQ5I7T1 473 aa13.11□□□□□ -0.31
RAB40B-202ENST00000538809 FAM91A1Q658Y4 838 aa13.11□□□□□ -0.31
RAB40B-202ENST00000538809 NANOGP8Q6NSW7 305 aa13.11□□□□□ -0.31
RAB40B-202ENST00000538809 LINGO2Q7L985 606 aa13.11□□□□□ -0.31
RAB40B-202ENST00000538809 CALHM3Q86XJ0 350 aa13.11□□□□□ -0.31
RAB40B-202ENST00000538809 ARMC8Q8IUR7 673 aa13.11□□□□□ -0.31
RAB40B-202ENST00000538809 EPHX4Q8IUS5 362 aa13.11□□□□□ -0.31
RAB40B-202ENST00000538809 C17orf78Q8N4C9 275 aa13.11□□□□□ -0.31
RAB40B-202ENST00000538809 C10orf82Q8WW14 230 aa13.11□□□□□ -0.31
RAB40B-202ENST00000538809 DNAJA4Q8WW22 397 aaPredicted RBP13.11□□□□□ -0.31
RAB40B-202ENST00000538809 SLC38A4Q969I6 547 aa13.11□□□□□ -0.31
RAB40B-202ENST00000538809 ZNF317Q96PQ6 595 aaPredicted RBP13.11□□□□□ -0.31
RAB40B-202ENST00000538809 ARHGDIGQ99819 225 aa13.11□□□□□ -0.31
RAB40B-202ENST00000538809 EVA1AQ9H8M9 152 aa13.11□□□□□ -0.31
RAB40B-202ENST00000538809 NANOGQ9H9S0 305 aa13.11□□□□□ -0.31
RAB40B-202ENST00000538809 MRGBPQ9NV56 204 aa13.11□□□□□ -0.31
RAB40B-202ENST00000538809 GDF2Q9UK05 429 aaPredicted RBP13.11□□□□□ -0.31
RAB40B-202ENST00000538809 RASD1Q9Y272 281 aa13.11□□□□□ -0.31
RAB40B-202ENST00000538809 ABCA1O95477 2261 aa13.1□□□□□ -0.31
RAB40B-202ENST00000538809 ABCA2Q9BZC7 2435 aa13.1□□□□□ -0.31
RAB40B-202ENST00000538809 FAM171A2A8MVW0 826 aa13.1□□□□□ -0.31
RAB40B-202ENST00000538809 ZNF587BE7ETH6 402 aa13.1□□□□□ -0.31
RAB40B-202ENST00000538809 M0QX08 132 aa13.1□□□□□ -0.31
RAB40B-202ENST00000538809 M0R082 166 aa13.1□□□□□ -0.31
RAB40B-202ENST00000538809 M0R3H8 397 aa13.1□□□□□ -0.31
RAB40B-202ENST00000538809 VAMP5O95183 116 aa13.1□□□□□ -0.31
RAB40B-202ENST00000538809 LGI1O95970 557 aa13.1□□□□□ -0.31
RAB40B-202ENST00000538809 C8BP07358 591 aa13.1□□□□□ -0.31
RAB40B-202ENST00000538809 VIMP08670 466 aaKnown RBP13.1□□□□□ -0.31
RAB40B-202ENST00000538809 CD247P20963 164 aa13.1□□□□□ -0.31
RAB40B-202ENST00000538809 ACVR1BP36896 505 aa13.1□□□□□ -0.31
RAB40B-202ENST00000538809 CLDN17P56750 224 aa13.1□□□□□ -0.31
RAB40B-202ENST00000538809 IL1RL1Q01638 556 aa13.1□□□□□ -0.31
RAB40B-202ENST00000538809 SF3A3Q12874 501 aaKnown RBP eCLIP13.1□□□□□ -0.31
RAB40B-202ENST00000538809 OR1Q1Q15612 314 aa13.1□□□□□ -0.31
RAB40B-202ENST00000538809 NPTX1Q15818 432 aa13.1□□□□□ -0.31
RAB40B-202ENST00000538809 REP15Q6BDI9 236 aa13.1□□□□□ -0.31
RAB40B-202ENST00000538809 KLHL24Q6TFL4 600 aa13.1□□□□□ -0.31
RAB40B-202ENST00000538809 C5orf46Q6UWT4 87 aa13.1□□□□□ -0.31
RAB40B-202ENST00000538809 DTX2Q86UW9 622 aa13.1□□□□□ -0.31
RAB40B-202ENST00000538809 SMYD1Q8NB12 490 aa13.1□□□□□ -0.31
RAB40B-202ENST00000538809 MAPK1IP1LQ8NDC0 245 aa13.1□□□□□ -0.31
RAB40B-202ENST00000538809 OR10A6Q8NH74 314 aa13.1□□□□□ -0.31
RAB40B-202ENST00000538809 ZNF417Q8TAU3 575 aa13.1□□□□□ -0.31
RAB40B-202ENST00000538809 TAAR8Q969N4 342 aa13.1□□□□□ -0.31
RAB40B-202ENST00000538809 LRRC58Q96CX6 371 aa13.1□□□□□ -0.31
RAB40B-202ENST00000538809 ZNF587Q96SQ5 575 aaPredicted RBP13.1□□□□□ -0.31
RAB40B-202ENST00000538809 FAIMQ9NVQ4 179 aa13.1□□□□□ -0.31
RAB40B-202ENST00000538809 KLHL14Q9P2G3 628 aa13.1□□□□□ -0.31
RAB40B-202ENST00000538809 B3GAT1Q9P2W7 334 aa13.1□□□□□ -0.31
RAB40B-202ENST00000538809 SLC13A4Q9UKG4 626 aa13.1□□□□□ -0.31
RAB40B-202ENST00000538809 MGAT4BQ9UQ53 548 aa13.1□□□□□ -0.31
RAB40B-202ENST00000538809 HIVEP2P31629 2446 aa13.09□□□□□ -0.31
RAB40B-202ENST00000538809 A0A087WUJ7 227 aa13.09□□□□□ -0.31
RAB40B-202ENST00000538809 BBIP1A8MTZ0 92 aa13.09□□□□□ -0.31
RAB40B-202ENST00000538809 RNF223E7ERA6 249 aa13.09□□□□□ -0.31
RAB40B-202ENST00000538809 FMO6PO60774 539 aa13.09□□□□□ -0.31
RAB40B-202ENST00000538809 UPK3AO75631 287 aa13.09□□□□□ -0.31
RAB40B-202ENST00000538809 GRPRP30550 384 aa13.09□□□□□ -0.31
RAB40B-202ENST00000538809 MDH1P40925 334 aaKnown RBP13.09□□□□□ -0.31
RAB40B-202ENST00000538809 TUBA1BP68363 451 aa13.09□□□□□ -0.31
RAB40B-202ENST00000538809 TUBA4AP68366 448 aa13.09□□□□□ -0.31
RAB40B-202ENST00000538809 VMACQ2NL98 169 aa13.09□□□□□ -0.31
RAB40B-202ENST00000538809 KRTAP21-3Q3LHN1 58 aa13.09□□□□□ -0.31
RAB40B-202ENST00000538809 HSP90B2PQ58FF3 399 aa13.09□□□□□ -0.31
RAB40B-202ENST00000538809 RABL3Q5HYI8 236 aa13.09□□□□□ -0.31
RAB40B-202ENST00000538809 FAM69AQ5T7M9 428 aa13.09□□□□□ -0.31
RAB40B-202ENST00000538809 ULK3Q6PHR2 472 aa13.09□□□□□ -0.31
RAB40B-202ENST00000538809 TUBA1AQ71U36 451 aa13.09□□□□□ -0.31
RAB40B-202ENST00000538809 CCDC80Q76M96 950 aa13.09□□□□□ -0.31
RAB40B-202ENST00000538809 ABHD12BQ7Z5M8 362 aaPredicted RBP13.09□□□□□ -0.31
RAB40B-202ENST00000538809 SLC30A8Q8IWU4 369 aa13.09□□□□□ -0.31
RAB40B-202ENST00000538809 OR8J3Q8NGG0 315 aa13.09□□□□□ -0.31
RAB40B-202ENST00000538809 OR4D11Q8NGI4 311 aa13.09□□□□□ -0.31
RAB40B-202ENST00000538809 OR1K1Q8NGR3 316 aa13.09□□□□□ -0.31
RAB40B-202ENST00000538809 OR6S1Q8NH40 331 aa13.09□□□□□ -0.31
RAB40B-202ENST00000538809 TAMM41Q96BW9 452 aa13.09□□□□□ -0.31
RAB40B-202ENST00000538809 SLC47A1Q96FL8 570 aa13.09□□□□□ -0.31
RAB40B-202ENST00000538809 BOD1Q96IK1 185 aa13.09□□□□□ -0.31
RAB40B-202ENST00000538809 RADILQ96JH8 1075 aa13.09□□□□□ -0.31
RAB40B-202ENST00000538809 HS6ST2Q96MM7 605 aa13.09□□□□□ -0.31
RAB40B-202ENST00000538809 CACNG6Q9BXT2 260 aa13.09□□□□□ -0.31
RAB40B-202ENST00000538809 SELENONQ9NZV5 590 aa13.09□□□□□ -0.31
RAB40B-202ENST00000538809 ATP23Q9Y6H3 246 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms