RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 SYT4Q9H2B2 425 aa12.78□□□□□ -0.36
ACTN1-205ENST00000538545 METTL7AQ9H8H3 244 aa12.78□□□□□ -0.36
ACTN1-205ENST00000538545 FBXO8Q9NRD0 319 aa12.78□□□□□ -0.36
ACTN1-205ENST00000538545 PTPRZ1P23471 2315 aaPredicted RBP12.78□□□□□ -0.36
ACTN1-205ENST00000538545 TCN2P20062 427 aa12.78□□□□□ -0.36
ACTN1-205ENST00000538545 GTF2E2P29084 291 aaKnown RBP12.78□□□□□ -0.36
ACTN1-205ENST00000538545 UQCRC1P31930 480 aa12.78□□□□□ -0.36
ACTN1-205ENST00000538545 MAGEB1P43366 347 aa12.78□□□□□ -0.36
ACTN1-205ENST00000538545 ETFDHQ16134 617 aa12.78□□□□□ -0.36
ACTN1-205ENST00000538545 ZNF468Q5VIY5 522 aaPredicted RBP12.78□□□□□ -0.36
ACTN1-205ENST00000538545 OR11G2Q8NGC1 345 aa12.78□□□□□ -0.36
ACTN1-205ENST00000538545 NUAK2Q9H093 628 aa12.78□□□□□ -0.36
ACTN1-205ENST00000538545 EVA1AQ9H8M9 152 aa12.78□□□□□ -0.36
ACTN1-205ENST00000538545 GALNT8Q9NY28 637 aa12.78□□□□□ -0.36
ACTN1-205ENST00000538545 FAM186AA6NE01 2351 aa12.78□□□□□ -0.36
ACTN1-205ENST00000538545 PCSK5Q92824 1860 aa12.77□□□□□ -0.36
ACTN1-205ENST00000538545 FLRT2O43155 660 aa12.77□□□□□ -0.36
ACTN1-205ENST00000538545 CD14P08571 375 aa12.77□□□□□ -0.36
ACTN1-205ENST00000538545 PRKCAP17252 672 aa12.77□□□□□ -0.36
ACTN1-205ENST00000538545 ENDOUP21128 410 aaKnown RBP12.77□□□□□ -0.36
ACTN1-205ENST00000538545 SLC6A8P48029 635 aa12.77□□□□□ -0.36
ACTN1-205ENST00000538545 RUNX1T1Q06455 604 aa12.77□□□□□ -0.36
ACTN1-205ENST00000538545 HNRNPA0Q13151 305 aaKnown RBP12.77□□□□□ -0.36
ACTN1-205ENST00000538545 TPBGQ13641 420 aa12.77□□□□□ -0.36
ACTN1-205ENST00000538545 TIMM50Q3ZCQ8 353 aa12.77□□□□□ -0.36
ACTN1-205ENST00000538545 B3GNTL1Q67FW5 361 aaPredicted RBP12.77□□□□□ -0.36
ACTN1-205ENST00000538545 PM20D2Q8IYS1 436 aa12.77□□□□□ -0.36
ACTN1-205ENST00000538545 ZNF417Q8TAU3 575 aa12.77□□□□□ -0.36
ACTN1-205ENST00000538545 ORAI1Q96D31 301 aa12.77□□□□□ -0.36
ACTN1-205ENST00000538545 ZNF587Q96SQ5 575 aaPredicted RBP12.77□□□□□ -0.36
ACTN1-205ENST00000538545 SLC19A3Q9BZV2 496 aa12.77□□□□□ -0.36
ACTN1-205ENST00000538545 FOXJ2Q9P0K8 574 aa12.77□□□□□ -0.36
ACTN1-205ENST00000538545 PPIEQ9UNP9 301 aaKnown RBP12.77□□□□□ -0.36
ACTN1-205ENST00000538545 C9J4A7 227 aa12.77□□□□□ -0.37
ACTN1-205ENST00000538545 ZNF670-ZNF695F2Z2N8 137 aa12.77□□□□□ -0.37
ACTN1-205ENST00000538545 RNF13O43567 381 aa12.77□□□□□ -0.37
ACTN1-205ENST00000538545 PRPS1P60891 318 aa12.77□□□□□ -0.37
ACTN1-205ENST00000538545 TUBA1BP68363 451 aa12.77□□□□□ -0.37
ACTN1-205ENST00000538545 TRA2AQ13595 282 aaKnown RBP eCLIP12.77□□□□□ -0.37
ACTN1-205ENST00000538545 C1orf140Q5VVS0 124 aa12.77□□□□□ -0.37
ACTN1-205ENST00000538545 TUBA1AQ71U36 451 aa12.77□□□□□ -0.37
ACTN1-205ENST00000538545 NAXDQ8IW45 347 aa12.77□□□□□ -0.37
ACTN1-205ENST00000538545 OR6V1Q8N148 313 aa12.77□□□□□ -0.37
ACTN1-205ENST00000538545 ELP5Q8TE02 316 aa12.77□□□□□ -0.37
ACTN1-205ENST00000538545 TMCO6Q96DC7 493 aa12.77□□□□□ -0.37
ACTN1-205ENST00000538545 GRHPRQ9UBQ7 328 aa12.77□□□□□ -0.37
ACTN1-205ENST00000538545 RPH3AQ9Y2J0 694 aaPredicted RBP12.77□□□□□ -0.37
ACTN1-205ENST00000538545 MRPS18BQ9Y676 258 aaKnown RBP12.77□□□□□ -0.37
ACTN1-205ENST00000538545 GABRPO00591 440 aa12.76□□□□□ -0.37
ACTN1-205ENST00000538545 ONECUT2O95948 504 aa12.76□□□□□ -0.37
ACTN1-205ENST00000538545 HIST1H2ABP04908 130 aa12.76□□□□□ -0.37
ACTN1-205ENST00000538545 PSKH1P11801 424 aa12.76□□□□□ -0.37
ACTN1-205ENST00000538545 KLK2P20151 261 aa12.76□□□□□ -0.37
ACTN1-205ENST00000538545 F8A1P23610 371 aa12.76□□□□□ -0.37
ACTN1-205ENST00000538545 GALEQ14376 348 aa12.76□□□□□ -0.37
ACTN1-205ENST00000538545 ZNF528Q3MIS6 628 aa12.76□□□□□ -0.37
ACTN1-205ENST00000538545 TMEM91Q6ZNR0 172 aa12.76□□□□□ -0.37
ACTN1-205ENST00000538545 HIST3H2AQ7L7L0 130 aa12.76□□□□□ -0.37
ACTN1-205ENST00000538545 SYT9Q86SS6 491 aa12.76□□□□□ -0.37
ACTN1-205ENST00000538545 JAZF1Q86VZ6 243 aa12.76□□□□□ -0.37
ACTN1-205ENST00000538545 FAM83FQ8NEG4 500 aaPredicted RBP12.76□□□□□ -0.37
ACTN1-205ENST00000538545 HIST1H2ACQ93077 130 aa12.76□□□□□ -0.37
ACTN1-205ENST00000538545 ABTB1Q969K4 478 aaPredicted RBP12.76□□□□□ -0.37
ACTN1-205ENST00000538545 UBL7Q96S82 380 aaPredicted RBP12.76□□□□□ -0.37
ACTN1-205ENST00000538545 SH3GL3Q99963 347 aa12.76□□□□□ -0.37
ACTN1-205ENST00000538545 EDEM2Q9BV94 578 aa12.76□□□□□ -0.37
ACTN1-205ENST00000538545 CDCP1Q9H5V8 836 aa12.76□□□□□ -0.37
ACTN1-205ENST00000538545 BABAM2Q9NXR7 383 aa12.76□□□□□ -0.37
ACTN1-205ENST00000538545 PPP4R1LQ9P1A2 415 aa12.76□□□□□ -0.37
ACTN1-205ENST00000538545 C19orf25Q9UFG5 118 aaPredicted RBP12.76□□□□□ -0.37
ACTN1-205ENST00000538545 KLHDC2Q9Y2U9 406 aa12.76□□□□□ -0.37
ACTN1-205ENST00000538545 A0A1W2PRG6 482 aa12.76□□□□□ -0.37
ACTN1-205ENST00000538545 IRGMA1A4Y4 181 aa12.76□□□□□ -0.37
ACTN1-205ENST00000538545 JMJD7P0C870 316 aa12.76□□□□□ -0.37
ACTN1-205ENST00000538545 CCKBRP32239 447 aa12.76□□□□□ -0.37
ACTN1-205ENST00000538545 POLR2HP52434 150 aaKnown RBP12.76□□□□□ -0.37
ACTN1-205ENST00000538545 KRR1Q13601 381 aaKnown RBP12.76□□□□□ -0.37
ACTN1-205ENST00000538545 PON3Q15166 354 aa12.76□□□□□ -0.37
ACTN1-205ENST00000538545 OR7A5Q15622 319 aa12.76□□□□□ -0.37
ACTN1-205ENST00000538545 ZMAT1Q5H9K5 638 aa12.76□□□□□ -0.37
ACTN1-205ENST00000538545 DCAF12Q5T6F0 453 aa12.76□□□□□ -0.37
ACTN1-205ENST00000538545 LINC01590Q5TEZ4 76 aa12.76□□□□□ -0.37
ACTN1-205ENST00000538545 ZNF517Q6ZMY9 492 aaPredicted RBP12.76□□□□□ -0.37
ACTN1-205ENST00000538545 GRINAQ7Z429 371 aa12.76□□□□□ -0.37
ACTN1-205ENST00000538545 LAX1Q8IWV1 398 aa12.76□□□□□ -0.37
ACTN1-205ENST00000538545 OR5L2Q8NGL0 311 aa12.76□□□□□ -0.37
ACTN1-205ENST00000538545 OR2Y1Q8NGV0 311 aa12.76□□□□□ -0.37
ACTN1-205ENST00000538545 ALG12Q9BV10 488 aa12.76□□□□□ -0.37
ACTN1-205ENST00000538545 WDR76Q9H967 626 aa12.76□□□□□ -0.37
ACTN1-205ENST00000538545 ACOXLQ9NUZ1 547 aa12.76□□□□□ -0.37
ACTN1-205ENST00000538545 BAIAP2Q9UQB8 552 aa12.76□□□□□ -0.37
ACTN1-205ENST00000538545 ZNF292O60281 2723 aa12.76□□□□□ -0.37
ACTN1-205ENST00000538545 MUC6Q6W4X9 2439 aa12.75□□□□□ -0.37
ACTN1-205ENST00000538545 TRAV36DV7A0A075B6V5 113 aa12.75□□□□□ -0.37
ACTN1-205ENST00000538545 A0A1W2PNR3 127 aa12.75□□□□□ -0.37
ACTN1-205ENST00000538545 C9orf172C9J069 976 aa12.75□□□□□ -0.37
ACTN1-205ENST00000538545 SLC30A4O14863 429 aa12.75□□□□□ -0.37
ACTN1-205ENST00000538545 ARPC3O15145 178 aa12.75□□□□□ -0.37
ACTN1-205ENST00000538545 AKAP8O43823 692 aaKnown RBP12.75□□□□□ -0.37
ACTN1-205ENST00000538545 TFPIP10646 304 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms