RNA–Protein interactions for RNA: ENST00000538470.2

DDB1-212, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-212ENST00000538470 OR2T1O43869 369 aa7.54□□□□□ -1.2
DDB1-212ENST00000538470 SLC43A1O75387 559 aa7.54□□□□□ -1.2
DDB1-212ENST00000538470 LGI1O95970 557 aa7.54□□□□□ -1.2
DDB1-212ENST00000538470 F12P00748 615 aaPredicted RBP7.54□□□□□ -1.2
DDB1-212ENST00000538470 IGLV1-44P01699 117 aa7.54□□□□□ -1.2
DDB1-212ENST00000538470 CRYAAP02489 173 aa7.54□□□□□ -1.2
DDB1-212ENST00000538470 PRG2P13727 222 aa7.54□□□□□ -1.2
DDB1-212ENST00000538470 HOXB9P17482 250 aaPredicted RBP7.54□□□□□ -1.2
DDB1-212ENST00000538470 USF1P22415 310 aaPredicted RBP7.54□□□□□ -1.2
DDB1-212ENST00000538470 PPIBP23284 216 aaKnown RBP7.54□□□□□ -1.2
DDB1-212ENST00000538470 PRKAR1BP31321 381 aa7.54□□□□□ -1.2
DDB1-212ENST00000538470 GZMKP49863 264 aa7.54□□□□□ -1.2
DDB1-212ENST00000538470 SELENOPP49908 381 aa7.54□□□□□ -1.2
DDB1-212ENST00000538470 PPOXP50336 477 aa7.54□□□□□ -1.2
DDB1-212ENST00000538470 PDLIM4P50479 330 aa7.54□□□□□ -1.2
DDB1-212ENST00000538470 BNIP2Q12982 314 aa7.54□□□□□ -1.2
DDB1-212ENST00000538470 MFSD13AQ14CX5 517 aa7.54□□□□□ -1.2
DDB1-212ENST00000538470 RGNQ15493 299 aa7.54□□□□□ -1.2
DDB1-212ENST00000538470 EFNB3Q15768 340 aa7.54□□□□□ -1.2
DDB1-212ENST00000538470 SWI5Q1ZZU3 235 aa7.54□□□□□ -1.2
DDB1-212ENST00000538470 GTDC1Q4AE62 458 aa7.54□□□□□ -1.2
DDB1-212ENST00000538470 LRIF1Q5T3J3 769 aa7.54□□□□□ -1.2
DDB1-212ENST00000538470 FAM69AQ5T7M9 428 aa7.54□□□□□ -1.2
DDB1-212ENST00000538470 NIPAL3Q6P499 406 aa7.54□□□□□ -1.2
DDB1-212ENST00000538470 ANKRD16Q6P6B7 361 aa7.54□□□□□ -1.2
DDB1-212ENST00000538470 DHRS4L2Q6PKH6 230 aa7.54□□□□□ -1.2
DDB1-212ENST00000538470 MAVSQ7Z434 540 aa7.54□□□□□ -1.2
DDB1-212ENST00000538470 SERPINA11Q86U17 422 aa7.54□□□□□ -1.2
DDB1-212ENST00000538470 EPHX4Q8IUS5 362 aa7.54□□□□□ -1.2
DDB1-212ENST00000538470 CLIP4Q8N3C7 705 aa7.54□□□□□ -1.2
DDB1-212ENST00000538470 OR9I1Q8NGQ6 314 aa7.54□□□□□ -1.2
DDB1-212ENST00000538470 SLC38A4Q969I6 547 aa7.54□□□□□ -1.2
DDB1-212ENST00000538470 C7orf26Q96N11 449 aa7.54□□□□□ -1.2
DDB1-212ENST00000538470 OR52B2Q96RD2 323 aa7.54□□□□□ -1.2
DDB1-212ENST00000538470 PTDSS2Q9BVG9 487 aa7.54□□□□□ -1.2
DDB1-212ENST00000538470 C1QTNF6Q9BXI9 259 aa7.54□□□□□ -1.2
DDB1-212ENST00000538470 PAIP1Q9H074 479 aaKnown RBP7.54□□□□□ -1.2
DDB1-212ENST00000538470 EVA1AQ9H8M9 152 aa7.54□□□□□ -1.2
DDB1-212ENST00000538470 SLCO1B3Q9NPD5 702 aa7.54□□□□□ -1.2
DDB1-212ENST00000538470 CA10Q9NS85 328 aa7.54□□□□□ -1.2
DDB1-212ENST00000538470 TESQ9UGI8 421 aaKnown RBP7.54□□□□□ -1.2
DDB1-212ENST00000538470 MOKQ9UQ07 419 aa7.54□□□□□ -1.2
DDB1-212ENST00000538470 CHST2Q9Y4C5 530 aa7.54□□□□□ -1.2
DDB1-212ENST00000538470 GMEB1Q9Y692 573 aa7.54□□□□□ -1.2
DDB1-212ENST00000538470 FBN1P35555 2871 aaKnown RBP7.54□□□□□ -1.2
DDB1-212ENST00000538470 VWC2LB2RUY7 222 aa7.53□□□□□ -1.2
DDB1-212ENST00000538470 B9A039 149 aa7.53□□□□□ -1.2
DDB1-212ENST00000538470 C5orf58C9J3I9 102 aa7.53□□□□□ -1.2
DDB1-212ENST00000538470 POLR3GO15318 223 aaPredicted RBP7.53□□□□□ -1.2
DDB1-212ENST00000538470 ZNF432O94892 652 aa7.53□□□□□ -1.2
DDB1-212ENST00000538470 TGDSO95455 350 aa7.53□□□□□ -1.2
DDB1-212ENST00000538470 IGKV3-15P01624 115 aa7.53□□□□□ -1.2
DDB1-212ENST00000538470 IGHV4-31P0DP07 118 aa7.53□□□□□ -1.2
DDB1-212ENST00000538470 ZNF16P17020 682 aaPredicted RBP7.53□□□□□ -1.2
DDB1-212ENST00000538470 ZNF43P17038 809 aa7.53□□□□□ -1.2
DDB1-212ENST00000538470 CDH2P19022 906 aaPredicted RBP7.53□□□□□ -1.2
DDB1-212ENST00000538470 RPS5P46782 204 aaKnown RBP7.53□□□□□ -1.2
DDB1-212ENST00000538470 NCALDP61601 193 aa7.53□□□□□ -1.2
DDB1-212ENST00000538470 ROR2Q01974 943 aaKnown RBP7.53□□□□□ -1.2
DDB1-212ENST00000538470 NAAAQ02083 359 aa7.53□□□□□ -1.2
DDB1-212ENST00000538470 EGR4Q05215 589 aa7.53□□□□□ -1.2
DDB1-212ENST00000538470 HSP90B2PQ58FF3 399 aa7.53□□□□□ -1.2
DDB1-212ENST00000538470 GCNT6Q5T4J0 391 aa7.53□□□□□ -1.2
DDB1-212ENST00000538470 FAM91A1Q658Y4 838 aa7.53□□□□□ -1.2
DDB1-212ENST00000538470 CYB5R2Q6BCY4 276 aa7.53□□□□□ -1.2
DDB1-212ENST00000538470 EPGNQ6UW88 154 aa7.53□□□□□ -1.2
DDB1-212ENST00000538470 SLC46A3Q7Z3Q1 461 aa7.53□□□□□ -1.2
DDB1-212ENST00000538470 KRT73Q86Y46 540 aa7.53□□□□□ -1.2
DDB1-212ENST00000538470 CCDC36Q8IYA8 594 aa7.53□□□□□ -1.2
DDB1-212ENST00000538470 LSMEM1Q8N8F7 131 aa7.53□□□□□ -1.2
DDB1-212ENST00000538470 PIK3C3Q8NEB9 887 aa7.53□□□□□ -1.2
DDB1-212ENST00000538470 NUP37Q8NFH4 326 aa7.53□□□□□ -1.2
DDB1-212ENST00000538470 BHLHE22Q8NFJ8 381 aaPredicted RBP7.53□□□□□ -1.2
DDB1-212ENST00000538470 OR4F15Q8NGB8 312 aa7.53□□□□□ -1.2
DDB1-212ENST00000538470 OR6S1Q8NH40 331 aa7.53□□□□□ -1.2
DDB1-212ENST00000538470 DNAJA4Q8WW22 397 aaPredicted RBP7.53□□□□□ -1.2
DDB1-212ENST00000538470 TMEM158Q8WZ71 300 aa7.53□□□□□ -1.2
DDB1-212ENST00000538470 BCL2L2Q92843 193 aaPredicted RBP7.53□□□□□ -1.2
DDB1-212ENST00000538470 FBXO17Q96EF6 278 aa7.53□□□□□ -1.2
DDB1-212ENST00000538470 KTI12Q96EK9 354 aaPredicted RBP7.53□□□□□ -1.2
DDB1-212ENST00000538470 OXGR1Q96P68 337 aa7.53□□□□□ -1.2
DDB1-212ENST00000538470 SORCS2Q96PQ0 1159 aa7.53□□□□□ -1.2
DDB1-212ENST00000538470 SPATA5L1Q9BVQ7 753 aa7.53□□□□□ -1.2
DDB1-212ENST00000538470 REPIN1Q9BWE0 567 aaKnown RBP7.53□□□□□ -1.2
DDB1-212ENST00000538470 NELFAQ9H3P2 528 aa7.53□□□□□ -1.2
DDB1-212ENST00000538470 ZNF442Q9H7R0 627 aa7.53□□□□□ -1.2
DDB1-212ENST00000538470 CORO2BQ9UQ03 480 aa7.53□□□□□ -1.2
DDB1-212ENST00000538470 PCDHB14Q9Y5E9 798 aa7.53□□□□□ -1.2
DDB1-212ENST00000538470 USH1CQ9Y6N9 552 aa7.53□□□□□ -1.2
DDB1-212ENST00000538470 CUBNO60494 3623 aa7.53□□□□□ -1.2
DDB1-212ENST00000538470 TRAV36DV7A0A075B6V5 113 aa7.52□□□□□ -1.21
DDB1-212ENST00000538470 LOC102725191A0A1B0GVB3 256 aa7.52□□□□□ -1.21
DDB1-212ENST00000538470 A0A1B0GWA3 101 aa7.52□□□□□ -1.21
DDB1-212ENST00000538470 PRORSD1PA6NEY8 169 aa7.52□□□□□ -1.21
DDB1-212ENST00000538470 RNF212BA8MTL3 300 aa7.52□□□□□ -1.21
DDB1-212ENST00000538470 M0R082 166 aa7.52□□□□□ -1.21
DDB1-212ENST00000538470 GPRIN2O60269 458 aa7.52□□□□□ -1.21
DDB1-212ENST00000538470 UPK3AO75631 287 aa7.52□□□□□ -1.21
DDB1-212ENST00000538470 ERCC1P07992 297 aaPredicted RBP7.52□□□□□ -1.21
DDB1-212ENST00000538470 NUDT7P0C024 238 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms