RNA–Protein interactions for RNA: ENST00000537877.5

DDB1-209, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-209ENST00000537877 ITGB2P05107 769 aa11.09□□□□□ -0.63
DDB1-209ENST00000537877 POU3F2P20265 443 aaPredicted RBP11.09□□□□□ -0.63
DDB1-209ENST00000537877 PAICSP22234 425 aaKnown RBP11.09□□□□□ -0.63
DDB1-209ENST00000537877 SDHAP31040 664 aa11.09□□□□□ -0.63
DDB1-209ENST00000537877 RFC3P40938 356 aa11.09□□□□□ -0.63
DDB1-209ENST00000537877 CD97P48960 835 aa11.09□□□□□ -0.63
DDB1-209ENST00000537877 DIO1P49895 249 aa11.09□□□□□ -0.63
DDB1-209ENST00000537877 OR2B6P58173 313 aa11.09□□□□□ -0.63
DDB1-209ENST00000537877 CTXN1P60606 82 aa11.09□□□□□ -0.63
DDB1-209ENST00000537877 ZNF169Q14929 603 aaPredicted RBP11.09□□□□□ -0.63
DDB1-209ENST00000537877 PAQR6Q6TCH4 344 aa11.09□□□□□ -0.63
DDB1-209ENST00000537877 UNQ6494/PRO21346Q6UXR6 183 aa11.09□□□□□ -0.63
DDB1-209ENST00000537877 ESPNLQ6ZVH7 1005 aa11.09□□□□□ -0.63
DDB1-209ENST00000537877 ASB18Q6ZVZ8 466 aa11.09□□□□□ -0.63
DDB1-209ENST00000537877 FAM122BQ7Z309 247 aa11.09□□□□□ -0.63
DDB1-209ENST00000537877 IGFN1Q86VF2 1251 aa11.09□□□□□ -0.63
DDB1-209ENST00000537877 BPIFB6Q8NFQ5 453 aa11.09□□□□□ -0.63
DDB1-209ENST00000537877 SMPDL3BQ92485 455 aa11.09□□□□□ -0.63
DDB1-209ENST00000537877 DNAJA3Q96EY1 480 aa11.09□□□□□ -0.63
DDB1-209ENST00000537877 LRR1Q96L50 414 aa11.09□□□□□ -0.63
DDB1-209ENST00000537877 ZDHHC11Q9H8X9 412 aa11.09□□□□□ -0.63
DDB1-209ENST00000537877 AASSQ9UDR5 926 aa11.09□□□□□ -0.63
DDB1-209ENST00000537877 SEC14L4Q9UDX3 406 aa11.09□□□□□ -0.63
DDB1-209ENST00000537877 IER3IP1Q9Y5U9 82 aa11.09□□□□□ -0.63
DDB1-209ENST00000537877 KDM4EB2RXH2 506 aaPredicted RBP11.08□□□□□ -0.64
DDB1-209ENST00000537877 PRODHO43272 600 aa11.08□□□□□ -0.64
DDB1-209ENST00000537877 SEC14L5O43304 696 aa11.08□□□□□ -0.64
DDB1-209ENST00000537877 RNF13O43567 381 aa11.08□□□□□ -0.64
DDB1-209ENST00000537877 XPNPEP2O43895 674 aa11.08□□□□□ -0.64
DDB1-209ENST00000537877 MRPS14O60783 128 aaKnown RBP11.08□□□□□ -0.64
DDB1-209ENST00000537877 SMNDC1O75940 238 aaKnown RBP eCLIP11.08□□□□□ -0.64
DDB1-209ENST00000537877 F13BP05160 661 aa11.08□□□□□ -0.64
DDB1-209ENST00000537877 MLLT10P55197 1068 aa11.08□□□□□ -0.64
DDB1-209ENST00000537877 ERVK-25P63136 954 aa11.08□□□□□ -0.64
DDB1-209ENST00000537877 C19orf57Q0VDD7 668 aa11.08□□□□□ -0.64
DDB1-209ENST00000537877 SLC10A1Q14973 349 aa11.08□□□□□ -0.64
DDB1-209ENST00000537877 INAQ16352 499 aa11.08□□□□□ -0.64
DDB1-209ENST00000537877 SMN1Q16637 294 aaKnown RBP11.08□□□□□ -0.64
DDB1-209ENST00000537877 TBR1Q16650 682 aa11.08□□□□□ -0.64
DDB1-209ENST00000537877 SLC35F1Q5T1Q4 408 aa11.08□□□□□ -0.64
DDB1-209ENST00000537877 PDSS1Q5T2R2 415 aa11.08□□□□□ -0.64
DDB1-209ENST00000537877 NXNL2Q5VZ03 156 aa11.08□□□□□ -0.64
DDB1-209ENST00000537877 Q6ZS92 163 aa11.08□□□□□ -0.64
DDB1-209ENST00000537877 CXXC5Q7LFL8 322 aaKnown RBP11.08□□□□□ -0.64
DDB1-209ENST00000537877 GGNQ86UU5 652 aa11.08□□□□□ -0.64
DDB1-209ENST00000537877 GID4Q8IVV7 300 aa11.08□□□□□ -0.64
DDB1-209ENST00000537877 LSM14AQ8ND56 463 aaKnown RBP11.08□□□□□ -0.64
DDB1-209ENST00000537877 ANKK1Q8NFD2 765 aa11.08□□□□□ -0.64
DDB1-209ENST00000537877 TSPAN14Q8NG11 270 aa11.08□□□□□ -0.64
DDB1-209ENST00000537877 IPCEF1Q8WWN9 437 aaPredicted RBP11.08□□□□□ -0.64
DDB1-209ENST00000537877 SLC39A7Q92504 469 aa11.08□□□□□ -0.64
DDB1-209ENST00000537877 RFKQ969G6 155 aa11.08□□□□□ -0.64
DDB1-209ENST00000537877 ZHX1-C8orf76Q96EF9 292 aa11.08□□□□□ -0.64
DDB1-209ENST00000537877 ZNF582Q96NG8 517 aaPredicted RBP11.08□□□□□ -0.64
DDB1-209ENST00000537877 MRPS26Q9BYN8 205 aaKnown RBP11.08□□□□□ -0.64
DDB1-209ENST00000537877 SLC6A15Q9H2J7 730 aa11.08□□□□□ -0.64
DDB1-209ENST00000537877 HINT3Q9NQE9 182 aaKnown RBP11.08□□□□□ -0.64
DDB1-209ENST00000537877 CNOT2Q9NZN8 540 aaKnown RBP11.08□□□□□ -0.64
DDB1-209ENST00000537877 DNAJC27Q9NZQ0 273 aa11.08□□□□□ -0.64
DDB1-209ENST00000537877 GRHPRQ9UBQ7 328 aa11.08□□□□□ -0.64
DDB1-209ENST00000537877 GPR52Q9Y2T5 361 aa11.08□□□□□ -0.64
DDB1-209ENST00000537877 ADAM18Q9Y3Q7 739 aa11.08□□□□□ -0.64
DDB1-209ENST00000537877 TNRC6AQ8NDV7 1962 aaKnown RBP11.08□□□□□ -0.64
DDB1-209ENST00000537877 CNTRLQ7Z7A1 2325 aa11.08□□□□□ -0.64
DDB1-209ENST00000537877 A0A087WXM4 84 aa11.07□□□□□ -0.64
DDB1-209ENST00000537877 A0A0J9YW62 118 aa11.07□□□□□ -0.64
DDB1-209ENST00000537877 TEX13CA0A0J9YWL9 993 aa11.07□□□□□ -0.64
DDB1-209ENST00000537877 LOC102725191A0A1B0GVB3 256 aa11.07□□□□□ -0.64
DDB1-209ENST00000537877 A0A1W2PRG6 482 aa11.07□□□□□ -0.64
DDB1-209ENST00000537877 TMEM8BA6NDV4 472 aa11.07□□□□□ -0.64
DDB1-209ENST00000537877 EFCAB10A6NFE3 127 aa11.07□□□□□ -0.64
DDB1-209ENST00000537877 AQP7P3A6NL99 342 aa11.07□□□□□ -0.64
DDB1-209ENST00000537877 CLCA1A8K7I4 914 aa11.07□□□□□ -0.64
DDB1-209ENST00000537877 C1QTNF9BB2RNN3 333 aa11.07□□□□□ -0.64
DDB1-209ENST00000537877 PRR23D1E9PI22 279 aaPredicted RBP11.07□□□□□ -0.64
DDB1-209ENST00000537877 C11orf98E9PRG8 122 aa11.07□□□□□ -0.64
DDB1-209ENST00000537877 TFECO14948 347 aaPredicted RBP11.07□□□□□ -0.64
DDB1-209ENST00000537877 ENTPD6O75354 484 aa11.07□□□□□ -0.64
DDB1-209ENST00000537877 AKR7A3O95154 331 aa11.07□□□□□ -0.64
DDB1-209ENST00000537877 SLC2A10O95528 541 aa11.07□□□□□ -0.64
DDB1-209ENST00000537877 ACTL6AO96019 429 aa11.07□□□□□ -0.64
DDB1-209ENST00000537877 OPN1LWP04000 364 aa11.07□□□□□ -0.64
DDB1-209ENST00000537877 CELA3AP09093 270 aa11.07□□□□□ -0.64
DDB1-209ENST00000537877 C1QTNF9P0C862 333 aa11.07□□□□□ -0.64
DDB1-209ENST00000537877 SMIM18P0DKX4 95 aa11.07□□□□□ -0.64
DDB1-209ENST00000537877 PRR23D2P0DMB1 279 aaPredicted RBP11.07□□□□□ -0.64
DDB1-209ENST00000537877 PIPP12273 146 aaPredicted RBP11.07□□□□□ -0.64
DDB1-209ENST00000537877 HIST1H1CP16403 213 aaKnown RBP11.07□□□□□ -0.64
DDB1-209ENST00000537877 ZNF24P17028 368 aa11.07□□□□□ -0.64
DDB1-209ENST00000537877 AHCYP23526 432 aa11.07□□□□□ -0.64
DDB1-209ENST00000537877 EEF1B2P24534 225 aaKnown RBP11.07□□□□□ -0.64
DDB1-209ENST00000537877 DAP3P51398 398 aaKnown RBP11.07□□□□□ -0.64
DDB1-209ENST00000537877 TUBA4AP68366 448 aa11.07□□□□□ -0.64
DDB1-209ENST00000537877 SLC35A2P78381 396 aa11.07□□□□□ -0.64
DDB1-209ENST00000537877 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.07□□□□□ -0.64
DDB1-209ENST00000537877 KRR1Q13601 381 aaKnown RBP11.07□□□□□ -0.64
DDB1-209ENST00000537877 APOFQ13790 326 aa11.07□□□□□ -0.64
DDB1-209ENST00000537877 CRMP1Q14194 572 aa11.07□□□□□ -0.64
DDB1-209ENST00000537877 BCL2A1Q16548 175 aa11.07□□□□□ -0.64
DDB1-209ENST00000537877 AADACL4Q5VUY2 407 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms