RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 FOXA1P55317 472 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 ERVK-16P61578 105 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 TBPL1P62380 186 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 DOC2AQ14183 400 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 GUK1Q16774 197 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 IAH1Q2TAA2 248 aaPredicted RBP5.29□□□□□ -1.56
CSMD1-215ENST00000537824 CXCL17Q6UXB2 119 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 ACOT7LQ6ZUV0 252 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 COMMD6Q7Z4G1 85 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 METTL27Q8N6F8 245 aaPredicted RBP5.29□□□□□ -1.56
CSMD1-215ENST00000537824 ZNF321PQ8N8H1 164 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 OR51S1Q8NGJ8 323 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 ZNF514Q96K75 400 aaPredicted RBP5.29□□□□□ -1.56
CSMD1-215ENST00000537824 TAF9BQ9HBM6 251 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 HSFX1Q9UBD0 423 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 A0A1W2PPV4 95 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 FEZF1A0PJY2 475 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 OR2F2O95006 317 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 SELENOWP63302 87 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 OR2F1Q13607 317 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 VARS2Q5ST30 1063 aaKnown RBP5.29□□□□□ -1.56
CSMD1-215ENST00000537824 FBXL22Q6P050 247 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 PRSS45Q7RTY3 260 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 LRRC56Q8IYG6 542 aaPredicted RBP5.29□□□□□ -1.56
CSMD1-215ENST00000537824 RASD2Q96D21 266 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 OSGIN2Q9Y236 505 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 PRAMEF11O60813 436 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 SFTA3P0C7M3 94 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 PKIAP61925 76 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 SLC7A9P82251 487 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 GHRHRQ02643 423 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 CLLU1Q5K131 121 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 ETV3LQ6ZN32 361 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 GPR142Q7Z601 462 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 ZSCAN4Q8NAM6 433 aaPredicted RBP5.29□□□□□ -1.56
CSMD1-215ENST00000537824 TMEM163Q8TC26 289 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 F2RL3Q96RI0 385 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 CPPED1Q9BRF8 314 aaPredicted RBP5.29□□□□□ -1.56
CSMD1-215ENST00000537824 METTL7AQ9H8H3 244 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 C1orf123Q9NWV4 160 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 SIDT1Q9NXL6 827 aaKnown RBP5.29□□□□□ -1.56
CSMD1-215ENST00000537824 KLHL13Q9P2N7 655 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 CSO75390 466 aaKnown RBP5.29□□□□□ -1.56
CSMD1-215ENST00000537824 C1GALT1C1LP0DN25 315 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 THBS3P49746 956 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 SHEQ5VZ18 495 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 DHRS4L2Q6PKH6 230 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 ANKLE1Q8NAG6 615 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 UHRF2Q96PU4 802 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 RAB11FIP5Q9BXF6 653 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 ALOXE3Q9BYJ1 711 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 HMX1Q9NP08 348 aaPredicted RBP5.29□□□□□ -1.56
CSMD1-215ENST00000537824 CRYBG1Q9Y4K1 1723 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 KLK4Q9Y5K2 254 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 TSPAN6O43657 245 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 MGMTP16455 207 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 GDI1P31150 447 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 WASP42768 502 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 RPUSD3Q6P087 351 aaKnown RBP5.29□□□□□ -1.56
CSMD1-215ENST00000537824 MDGA2Q7Z553 956 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 ZNF383Q8NA42 475 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 ZNF587Q96SQ5 575 aaPredicted RBP5.29□□□□□ -1.56
CSMD1-215ENST00000537824 ZDHHC11Q9H8X9 412 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 RYDENQ9NUL5 291 aaKnown RBP5.29□□□□□ -1.56
CSMD1-215ENST00000537824 SLC6A14Q9UN76 642 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 FAM183AA6NL82 134 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 SEC14L6B5MCN3 397 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 SYN3O14994 580 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 LILRB3O75022 631 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 GABRA2P47869 451 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 CHRNEQ04844 493 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 PRAMEF19Q5SWL8 479 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 ERN2Q76MJ5 926 aaKnown RBP5.29□□□□□ -1.56
CSMD1-215ENST00000537824 ZC3H3Q8IXZ2 948 aaKnown RBP5.29□□□□□ -1.56
CSMD1-215ENST00000537824 HCAR2Q8TDS4 363 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 NANOS1Q8WY41 292 aaKnown RBP5.29□□□□□ -1.56
CSMD1-215ENST00000537824 PRRC1Q96M27 445 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 LINC00052Q96N35 136 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 PDE7BQ9NP56 450 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 NOX4Q9NPH5 578 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 NLE1Q9NVX2 485 aaPredicted RBP5.29□□□□□ -1.56
CSMD1-215ENST00000537824 KCNK6Q9Y257 313 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 A0A0B4J203 849 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 IRAK2O43187 625 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 MSX1P28360 303 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 CRHR2Q13324 411 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 NFATC2Q13469 925 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 AAK1Q2M2I8 961 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 LEXMQ3ZCV2 418 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 CDONQ4KMG0 1287 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 MFSD9Q8NBP5 474 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 IER2Q9BTL4 223 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 KATNB1Q9BVA0 655 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 SMOC2Q9H3U7 446 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 EVA1BQ9NVM1 165 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 LAMP3Q9UQV4 416 aa5.29□□□□□ -1.56
CSMD1-215ENST00000537824 KDELR3O43731 214 aa5.28□□□□□ -1.56
CSMD1-215ENST00000537824 GYPBP06028 91 aa5.28□□□□□ -1.56
CSMD1-215ENST00000537824 H2AFB1P0C5Y9 115 aa5.28□□□□□ -1.56
CSMD1-215ENST00000537824 HTR6P50406 440 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms