RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 TDGF1P13385 188 aa12.34□□□□□ -0.43
SMG6-203ENST00000536871 MST1P26927 711 aa12.34□□□□□ -0.43
SMG6-203ENST00000536871 MSX1P28360 303 aa12.34□□□□□ -0.43
SMG6-203ENST00000536871 EVX1P49640 407 aa12.34□□□□□ -0.43
SMG6-203ENST00000536871 RGS19P49795 217 aa12.34□□□□□ -0.43
SMG6-203ENST00000536871 EMP2P54851 167 aa12.34□□□□□ -0.43
SMG6-203ENST00000536871 CCL7P80098 99 aa12.34□□□□□ -0.43
SMG6-203ENST00000536871 RPL18Q07020 188 aaKnown RBP12.34□□□□□ -0.43
SMG6-203ENST00000536871 CCBE1Q6UXH8 406 aaPredicted RBP12.34□□□□□ -0.43
SMG6-203ENST00000536871 FAM220AQ7Z4H9 259 aa12.34□□□□□ -0.43
SMG6-203ENST00000536871 CEACAM19Q7Z692 300 aa12.34□□□□□ -0.43
SMG6-203ENST00000536871 MARCH3Q86UD3 253 aa12.34□□□□□ -0.43
SMG6-203ENST00000536871 AKAP14Q86UN6 197 aa12.34□□□□□ -0.43
SMG6-203ENST00000536871 LRRC28Q86X40 367 aaPredicted RBP12.34□□□□□ -0.43
SMG6-203ENST00000536871 PRR22Q8IZ63 422 aa12.34□□□□□ -0.43
SMG6-203ENST00000536871 NFAM1Q8NET5 270 aaPredicted RBP12.34□□□□□ -0.43
SMG6-203ENST00000536871 ZNF486Q96H40 463 aaPredicted RBP12.34□□□□□ -0.43
SMG6-203ENST00000536871 PGLYRP3Q96LB9 341 aa12.34□□□□□ -0.43
SMG6-203ENST00000536871 SOSTQ9BQB4 213 aa12.34□□□□□ -0.43
SMG6-203ENST00000536871 SLC22A4Q9H015 551 aa12.34□□□□□ -0.43
SMG6-203ENST00000536871 POLE4Q9NR33 117 aa12.34□□□□□ -0.43
SMG6-203ENST00000536871 KLHL1Q9NR64 748 aa12.34□□□□□ -0.43
SMG6-203ENST00000536871 SDHAF3Q9NRP4 125 aa12.34□□□□□ -0.43
SMG6-203ENST00000536871 SLC22A11Q9NSA0 550 aa12.34□□□□□ -0.43
SMG6-203ENST00000536871 TAS2R10Q9NYW0 307 aa12.34□□□□□ -0.43
SMG6-203ENST00000536871 NCDNQ9UBB6 729 aa12.34□□□□□ -0.43
SMG6-203ENST00000536871 COMMD3Q9UBI1 195 aa12.34□□□□□ -0.43
SMG6-203ENST00000536871 FBXL4Q9UKA2 621 aa12.34□□□□□ -0.43
SMG6-203ENST00000536871 LY6G6EA0A0G2JKS1 128 aa12.34□□□□□ -0.43
SMG6-203ENST00000536871 A0A1W2PQM1 296 aa12.34□□□□□ -0.43
SMG6-203ENST00000536871 ZNF879B4DU55 563 aa12.34□□□□□ -0.43
SMG6-203ENST00000536871 LRRN3E7EW58 273 aa12.34□□□□□ -0.43
SMG6-203ENST00000536871 XKRYO14609 159 aa12.34□□□□□ -0.43
SMG6-203ENST00000536871 SNPHO15079 494 aa12.34□□□□□ -0.43
SMG6-203ENST00000536871 CPNE3O75131 537 aaKnown RBP12.34□□□□□ -0.43
SMG6-203ENST00000536871 HLA-DQB1P01920 261 aa12.34□□□□□ -0.43
SMG6-203ENST00000536871 TFP02787 698 aa12.34□□□□□ -0.43
SMG6-203ENST00000536871 BGLAPP02818 100 aa12.34□□□□□ -0.43
SMG6-203ENST00000536871 SF3B4Q15427 424 aaKnown RBP eCLIP12.34□□□□□ -0.43
SMG6-203ENST00000536871 ACSM3Q53FZ2 586 aa12.34□□□□□ -0.43
SMG6-203ENST00000536871 GDPD3Q7L5L3 318 aa12.34□□□□□ -0.43
SMG6-203ENST00000536871 PRSS58Q8IYP2 241 aa12.34□□□□□ -0.43
SMG6-203ENST00000536871 OR6K6Q8NGW6 343 aa12.34□□□□□ -0.43
SMG6-203ENST00000536871 OR5J2Q8NH18 312 aa12.34□□□□□ -0.43
SMG6-203ENST00000536871 HTRA1Q92743 480 aa12.34□□□□□ -0.43
SMG6-203ENST00000536871 GHSRQ92847 366 aa12.34□□□□□ -0.43
SMG6-203ENST00000536871 PELI1Q96FA3 418 aa12.34□□□□□ -0.43
SMG6-203ENST00000536871 ZC3H10Q96K80 434 aaKnown RBP12.34□□□□□ -0.43
SMG6-203ENST00000536871 Q96M85 177 aa12.34□□□□□ -0.43
SMG6-203ENST00000536871 CMTM3Q96MX0 182 aa12.34□□□□□ -0.43
SMG6-203ENST00000536871 MOGAT1Q96PD6 335 aa12.34□□□□□ -0.43
SMG6-203ENST00000536871 MRI1Q9BV20 369 aa12.34□□□□□ -0.43
SMG6-203ENST00000536871 SIRT4Q9Y6E7 314 aaPredicted RBP12.34□□□□□ -0.43
SMG6-203ENST00000536871 U3KQA8 63 aa12.34□□□□□ -0.43
SMG6-203ENST00000536871 TMED7-TICAM2A0A0A6YYA0 188 aa12.33□□□□□ -0.44
SMG6-203ENST00000536871 ANKUB1A6NFN9 424 aa12.33□□□□□ -0.44
SMG6-203ENST00000536871 NOTOA8MTQ0 251 aa12.33□□□□□ -0.44
SMG6-203ENST00000536871 NPIPB7O75200 414 aa12.33□□□□□ -0.44
SMG6-203ENST00000536871 AHSA1O95433 338 aa12.33□□□□□ -0.44
SMG6-203ENST00000536871 FGF5P12034 268 aa12.33□□□□□ -0.44
SMG6-203ENST00000536871 GDI2P50395 445 aaKnown RBP12.33□□□□□ -0.44
SMG6-203ENST00000536871 EFNA3P52797 238 aa12.33□□□□□ -0.44
SMG6-203ENST00000536871 SLC3A1Q07837 685 aa12.33□□□□□ -0.44
SMG6-203ENST00000536871 QPRTQ15274 297 aa12.33□□□□□ -0.44
SMG6-203ENST00000536871 PYDC2Q56P42 97 aa12.33□□□□□ -0.44
SMG6-203ENST00000536871 FAM209AQ5JX71 171 aa12.33□□□□□ -0.44
SMG6-203ENST00000536871 LINC01590Q5TEZ4 76 aa12.33□□□□□ -0.44
SMG6-203ENST00000536871 HACD4Q5VWC8 232 aa12.33□□□□□ -0.44
SMG6-203ENST00000536871 LANCL3Q6ZV70 420 aa12.33□□□□□ -0.44
SMG6-203ENST00000536871 EXD3Q8N9H8 876 aa12.33□□□□□ -0.44
SMG6-203ENST00000536871 APCDD1LQ8NCL9 501 aa12.33□□□□□ -0.44
SMG6-203ENST00000536871 C19orf18Q8NEA5 215 aa12.33□□□□□ -0.44
SMG6-203ENST00000536871 RPS4Y2Q8TD47 263 aa12.33□□□□□ -0.44
SMG6-203ENST00000536871 GPR119Q8TDV5 335 aa12.33□□□□□ -0.44
SMG6-203ENST00000536871 PIGKQ92643 395 aa12.33□□□□□ -0.44
SMG6-203ENST00000536871 TAAR8Q969N4 342 aa12.33□□□□□ -0.44
SMG6-203ENST00000536871 RASD2Q96D21 266 aa12.33□□□□□ -0.44
SMG6-203ENST00000536871 KTI12Q96EK9 354 aaPredicted RBP12.33□□□□□ -0.44
SMG6-203ENST00000536871 CCDC74BQ96LY2 380 aa12.33□□□□□ -0.44
SMG6-203ENST00000536871 NRSN2Q9GZP1 204 aa12.33□□□□□ -0.44
SMG6-203ENST00000536871 GAREM1Q9H706 876 aa12.33□□□□□ -0.44
SMG6-203ENST00000536871 WDR54Q9H977 334 aa12.33□□□□□ -0.44
SMG6-203ENST00000536871 ABRACLQ9P1F3 81 aa12.33□□□□□ -0.44
SMG6-203ENST00000536871 TEKT2Q9UIF3 430 aa12.33□□□□□ -0.44
SMG6-203ENST00000536871 MUTYHQ9UIF7 546 aa12.33□□□□□ -0.44
SMG6-203ENST00000536871 ATXN7L1Q9ULK2 861 aaPredicted RBP12.33□□□□□ -0.44
SMG6-203ENST00000536871 TMED7Q9Y3B3 224 aa12.33□□□□□ -0.44
SMG6-203ENST00000536871 SZT2Q5T011 3432 aa12.33□□□□□ -0.44
SMG6-203ENST00000536871 CDC14CA4D256 554 aa12.32□□□□□ -0.44
SMG6-203ENST00000536871 PDCD5O14737 125 aa12.32□□□□□ -0.44
SMG6-203ENST00000536871 SUSD5O60279 629 aa12.32□□□□□ -0.44
SMG6-203ENST00000536871 ZFAND5O76080 213 aa12.32□□□□□ -0.44
SMG6-203ENST00000536871 ZNF432O94892 652 aa12.32□□□□□ -0.44
SMG6-203ENST00000536871 OR6A2O95222 327 aa12.32□□□□□ -0.44
SMG6-203ENST00000536871 IGHMP01871 453 aa12.32□□□□□ -0.44
SMG6-203ENST00000536871 MYF5P13349 255 aa12.32□□□□□ -0.44
SMG6-203ENST00000536871 TCEA1P23193 301 aaKnown RBP12.32□□□□□ -0.44
SMG6-203ENST00000536871 APOBEC1P41238 236 aaKnown RBP12.32□□□□□ -0.44
SMG6-203ENST00000536871 CDKN2AP42771 156 aaKnown RBP12.32□□□□□ -0.44
SMG6-203ENST00000536871 TPTEP56180 551 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms