RNA–Protein interactions for RNA: ENST00000536823.5

YBX3-206, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 840 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-206ENST00000536823 RNF220Q5VTB9 566 aa6.23□□□□□ -1.41
YBX3-206ENST00000536823 PRAMEF8Q5VWM4 474 aa6.23□□□□□ -1.41
YBX3-206ENST00000536823 PRAMEF7Q5VXH5 474 aa6.23□□□□□ -1.41
YBX3-206ENST00000536823 SLC2A7Q6PXP3 512 aa6.23□□□□□ -1.41
YBX3-206ENST00000536823 FUNDC1Q8IVP5 155 aa6.23□□□□□ -1.41
YBX3-206ENST00000536823 TUSC5Q8IXB3 177 aa6.23□□□□□ -1.41
YBX3-206ENST00000536823 GABRG1Q8N1C3 465 aa6.23□□□□□ -1.41
YBX3-206ENST00000536823 STEAP2Q8NFT2 490 aa6.23□□□□□ -1.41
YBX3-206ENST00000536823 SLC38A5Q8WUX1 472 aa6.23□□□□□ -1.41
YBX3-206ENST00000536823 CKAP2Q8WWK9 683 aa6.23□□□□□ -1.41
YBX3-206ENST00000536823 SPDL1Q96EA4 605 aa6.23□□□□□ -1.41
YBX3-206ENST00000536823 ZHX1-C8orf76Q96EF9 292 aa6.23□□□□□ -1.41
YBX3-206ENST00000536823 ZC3HAV1LQ96H79 300 aaKnown RBP6.23□□□□□ -1.41
YBX3-206ENST00000536823 TMEM19Q96HH6 336 aa6.23□□□□□ -1.41
YBX3-206ENST00000536823 PSD2Q9BQI7 771 aa6.23□□□□□ -1.41
YBX3-206ENST00000536823 A4GALTQ9NPC4 353 aa6.23□□□□□ -1.41
YBX3-206ENST00000536823 TMEM45AQ9NWC5 275 aa6.23□□□□□ -1.41
YBX3-206ENST00000536823 EMC3Q9P0I2 261 aa6.23□□□□□ -1.41
YBX3-206ENST00000536823 H2AFY2Q9P0M6 372 aaPredicted RBP6.23□□□□□ -1.41
YBX3-206ENST00000536823 C6orf203Q9P0P8 240 aaPredicted RBP6.23□□□□□ -1.41
YBX3-206ENST00000536823 OSGIN1Q9UJX0 560 aa6.23□□□□□ -1.41
YBX3-206ENST00000536823 PRDM4Q9UKN5 801 aa6.23□□□□□ -1.41
YBX3-206ENST00000536823 ZNF443Q9Y2A4 671 aaPredicted RBP6.23□□□□□ -1.41
YBX3-206ENST00000536823 GPR52Q9Y2T5 361 aa6.23□□□□□ -1.41
YBX3-206ENST00000536823 HDGFL3Q9Y3E1 203 aa6.23□□□□□ -1.41
YBX3-206ENST00000536823 JMJD1CQ15652 2540 aa6.23□□□□□ -1.41
YBX3-206ENST00000536823 IGKV3D-15A0A087WSY6 115 aa6.22□□□□□ -1.41
YBX3-206ENST00000536823 TRBV5-3A0A0A0MS03 114 aa6.22□□□□□ -1.41
YBX3-206ENST00000536823 TMED7-TICAM2A0A0A6YYA0 188 aa6.22□□□□□ -1.41
YBX3-206ENST00000536823 A0A0G2JPF8 293 aa6.22□□□□□ -1.41
YBX3-206ENST00000536823 TMEM72A0PK05 275 aa6.22□□□□□ -1.41
YBX3-206ENST00000536823 CDHR4A6H8M9 788 aa6.22□□□□□ -1.41
YBX3-206ENST00000536823 TMEM247A6NEH6 219 aa6.22□□□□□ -1.41
YBX3-206ENST00000536823 ZNF724A8MTY0 619 aa6.22□□□□□ -1.41
YBX3-206ENST00000536823 HNRNPCL2B2RXH8 293 aa6.22□□□□□ -1.41
YBX3-206ENST00000536823 HNRNPCL3B7ZW38 293 aa6.22□□□□□ -1.41
YBX3-206ENST00000536823 CLIC1O00299 241 aa6.22□□□□□ -1.41
YBX3-206ENST00000536823 HNRNPCL1O60812 293 aaKnown RBP6.22□□□□□ -1.41
YBX3-206ENST00000536823 TFPTP0C1Z6 253 aa6.22□□□□□ -1.41
YBX3-206ENST00000536823 HNRNPCL4P0DMR1 293 aa6.22□□□□□ -1.41
YBX3-206ENST00000536823 FAHP16930 419 aa6.22□□□□□ -1.41
YBX3-206ENST00000536823 CD53P19397 219 aa6.22□□□□□ -1.41
YBX3-206ENST00000536823 PPIBP23284 216 aaKnown RBP6.22□□□□□ -1.41
YBX3-206ENST00000536823 SLC1A3P43003 542 aa6.22□□□□□ -1.41
YBX3-206ENST00000536823 OR3A2P47893 321 aa6.22□□□□□ -1.41
YBX3-206ENST00000536823 MAP2K6P52564 334 aa6.22□□□□□ -1.41
YBX3-206ENST00000536823 KEAP1Q14145 624 aa6.22□□□□□ -1.41
YBX3-206ENST00000536823 SQLEQ14534 574 aa6.22□□□□□ -1.41
YBX3-206ENST00000536823 ICAM4Q14773 271 aa6.22□□□□□ -1.41
YBX3-206ENST00000536823 LARS2Q15031 903 aaKnown RBP6.22□□□□□ -1.41
YBX3-206ENST00000536823 PDK3Q15120 406 aa6.22□□□□□ -1.41
YBX3-206ENST00000536823 RGNQ15493 299 aa6.22□□□□□ -1.41
YBX3-206ENST00000536823 ZSWIM7Q19AV6 140 aa6.22□□□□□ -1.41
YBX3-206ENST00000536823 DEFB113Q30KQ7 82 aa6.22□□□□□ -1.41
YBX3-206ENST00000536823 AGKQ53H12 422 aa6.22□□□□□ -1.41
YBX3-206ENST00000536823 ZNF836Q6ZNA1 936 aa6.22□□□□□ -1.41
YBX3-206ENST00000536823 CXorf67Q86X51 503 aaPredicted RBP6.22□□□□□ -1.41
YBX3-206ENST00000536823 ZNF575Q86XF7 245 aa6.22□□□□□ -1.41
YBX3-206ENST00000536823 VRK2Q86Y07 508 aa6.22□□□□□ -1.41
YBX3-206ENST00000536823 ADGRG3Q86Y34 549 aa6.22□□□□□ -1.41
YBX3-206ENST00000536823 MSRB3Q8IXL7 192 aa6.22□□□□□ -1.41
YBX3-206ENST00000536823 OR52P1PQ8NH57 321 aa6.22□□□□□ -1.41
YBX3-206ENST00000536823 BBS10Q8TAM1 723 aa6.22□□□□□ -1.41
YBX3-206ENST00000536823 PIGXQ8TBF5 258 aa6.22□□□□□ -1.41
YBX3-206ENST00000536823 PIK3IP1Q96FE7 263 aa6.22□□□□□ -1.41
YBX3-206ENST00000536823 ARL5BQ96KC2 179 aa6.22□□□□□ -1.41
YBX3-206ENST00000536823 MAGEB18Q96M61 343 aa6.22□□□□□ -1.41
YBX3-206ENST00000536823 ZNF300Q96RE9 604 aaPredicted RBP6.22□□□□□ -1.41
YBX3-206ENST00000536823 OR11A1Q9GZK7 315 aa6.22□□□□□ -1.41
YBX3-206ENST00000536823 ACTR6Q9GZN1 396 aa6.22□□□□□ -1.41
YBX3-206ENST00000536823 CACYBPQ9HB71 228 aaKnown RBP6.22□□□□□ -1.41
YBX3-206ENST00000536823 BCL2L10Q9HD36 194 aa6.22□□□□□ -1.41
YBX3-206ENST00000536823 SLC52A3Q9NQ40 469 aa6.22□□□□□ -1.41
YBX3-206ENST00000536823 RLIMQ9NVW2 624 aa6.22□□□□□ -1.41
YBX3-206ENST00000536823 SLC25A37Q9NYZ2 338 aa6.22□□□□□ -1.41
YBX3-206ENST00000536823 CCDC167Q9P0B6 97 aa6.22□□□□□ -1.41
YBX3-206ENST00000536823 TMED7Q9Y3B3 224 aa6.22□□□□□ -1.41
YBX3-206ENST00000536823 GMEB1Q9Y692 573 aa6.22□□□□□ -1.41
YBX3-206ENST00000536823 SONP18583 2426 aaKnown RBP6.22□□□□□ -1.41
YBX3-206ENST00000536823 RAI1Q7Z5J4 1906 aaPredicted RBP6.22□□□□□ -1.41
YBX3-206ENST00000536823 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.21□□□□□ -1.42
YBX3-206ENST00000536823 ZNF716A6NP11 495 aa6.21□□□□□ -1.42
YBX3-206ENST00000536823 ZNF814B7Z6K7 855 aa6.21□□□□□ -1.42
YBX3-206ENST00000536823 GPR171O14626 319 aa6.21□□□□□ -1.42
YBX3-206ENST00000536823 ZNF208O43345 1280 aa6.21□□□□□ -1.42
YBX3-206ENST00000536823 EIF1BO60739 113 aaKnown RBP6.21□□□□□ -1.42
YBX3-206ENST00000536823 EDF1O60869 148 aaKnown RBP6.21□□□□□ -1.42
YBX3-206ENST00000536823 PGM3O95394 542 aa6.21□□□□□ -1.42
YBX3-206ENST00000536823 GKN3PP0CG01 181 aa6.21□□□□□ -1.42
YBX3-206ENST00000536823 CCNA2P20248 432 aa6.21□□□□□ -1.42
YBX3-206ENST00000536823 COX5AP20674 150 aa6.21□□□□□ -1.42
YBX3-206ENST00000536823 IL32P24001 234 aa6.21□□□□□ -1.42
YBX3-206ENST00000536823 EDNRAP25101 427 aa6.21□□□□□ -1.42
YBX3-206ENST00000536823 TACR3P29371 465 aa6.21□□□□□ -1.42
YBX3-206ENST00000536823 ACAA2P42765 397 aaKnown RBP6.21□□□□□ -1.42
YBX3-206ENST00000536823 SLC16A1P53985 500 aa6.21□□□□□ -1.42
YBX3-206ENST00000536823 NR1H2P55055 460 aa6.21□□□□□ -1.42
YBX3-206ENST00000536823 OR2B6P58173 313 aa6.21□□□□□ -1.42
YBX3-206ENST00000536823 P2RY6Q15077 328 aa6.21□□□□□ -1.42
YBX3-206ENST00000536823 PAGE3Q5JUK9 113 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms