RNA–Protein interactions for RNA: ENST00000536255.6

RPAIN-205, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-205ENST00000536255 VLDLRP98155 873 aa12.02□□□□□ -0.49
RPAIN-205ENST00000536255 CHRNB3Q05901 458 aa12.02□□□□□ -0.49
RPAIN-205ENST00000536255 SLC17A1Q14916 467 aa12.02□□□□□ -0.49
RPAIN-205ENST00000536255 ZNF74Q16587 644 aa12.02□□□□□ -0.49
RPAIN-205ENST00000536255 ZNF474Q6S9Z5 364 aaPredicted RBP12.02□□□□□ -0.49
RPAIN-205ENST00000536255 HIST3H2AQ7L7L0 130 aa12.02□□□□□ -0.49
RPAIN-205ENST00000536255 RRM2BQ7LG56 351 aa12.02□□□□□ -0.49
RPAIN-205ENST00000536255 GPAT4Q86UL3 456 aa12.02□□□□□ -0.49
RPAIN-205ENST00000536255 ZDHHC21Q8IVQ6 265 aa12.02□□□□□ -0.49
RPAIN-205ENST00000536255 AQP12AQ8IXF9 295 aa12.02□□□□□ -0.49
RPAIN-205ENST00000536255 RNF113BQ8IZP6 322 aaKnown RBP12.02□□□□□ -0.49
RPAIN-205ENST00000536255 PIK3C3Q8NEB9 887 aa12.02□□□□□ -0.49
RPAIN-205ENST00000536255 ZNF417Q8TAU3 575 aa12.02□□□□□ -0.49
RPAIN-205ENST00000536255 TMEM255BQ8WV15 326 aa12.02□□□□□ -0.49
RPAIN-205ENST00000536255 HIST1H2ACQ93077 130 aa12.02□□□□□ -0.49
RPAIN-205ENST00000536255 ZNF587Q96SQ5 575 aaPredicted RBP12.02□□□□□ -0.49
RPAIN-205ENST00000536255 SEPHS2Q99611 448 aa12.02□□□□□ -0.49
RPAIN-205ENST00000536255 NMNAT1Q9HAN9 279 aaPredicted RBP12.02□□□□□ -0.49
RPAIN-205ENST00000536255 PARPBPQ9NWS1 579 aa12.02□□□□□ -0.49
RPAIN-205ENST00000536255 MRPL39Q9NYK5 338 aaKnown RBP12.02□□□□□ -0.49
RPAIN-205ENST00000536255 RHCGQ9UBD6 479 aa12.02□□□□□ -0.49
RPAIN-205ENST00000536255 ZNF229Q9UJW7 825 aa12.02□□□□□ -0.49
RPAIN-205ENST00000536255 NOSIPQ9Y314 301 aaKnown RBP12.02□□□□□ -0.49
RPAIN-205ENST00000536255 CSMD1Q96PZ7 3565 aa12.02□□□□□ -0.49
RPAIN-205ENST00000536255 MPDZO75970 2070 aa12.01□□□□□ -0.49
RPAIN-205ENST00000536255 A0A1W2PRQ8 180 aa12.01□□□□□ -0.49
RPAIN-205ENST00000536255 TCRBV5S2A0A599 114 aa12.01□□□□□ -0.49
RPAIN-205ENST00000536255 ZNF814B7Z6K7 855 aa12.01□□□□□ -0.49
RPAIN-205ENST00000536255 FFAR1O14842 300 aa12.01□□□□□ -0.49
RPAIN-205ENST00000536255 PRSS23O95084 383 aa12.01□□□□□ -0.49
RPAIN-205ENST00000536255 CH25HO95992 272 aa12.01□□□□□ -0.49
RPAIN-205ENST00000536255 UMPSP11172 480 aa12.01□□□□□ -0.49
RPAIN-205ENST00000536255 ZNF43P17038 809 aa12.01□□□□□ -0.49
RPAIN-205ENST00000536255 KLK2P20151 261 aa12.01□□□□□ -0.49
RPAIN-205ENST00000536255 CD79BP40259 229 aa12.01□□□□□ -0.49
RPAIN-205ENST00000536255 PCYT1AP49585 367 aa12.01□□□□□ -0.49
RPAIN-205ENST00000536255 UGT2B15P54855 530 aa12.01□□□□□ -0.49
RPAIN-205ENST00000536255 KRTAP10-9P60411 292 aa12.01□□□□□ -0.49
RPAIN-205ENST00000536255 IL1RL1Q01638 556 aa12.01□□□□□ -0.49
RPAIN-205ENST00000536255 FOXD4Q12950 439 aaPredicted RBP12.01□□□□□ -0.49
RPAIN-205ENST00000536255 PMS2P3Q13401 168 aa12.01□□□□□ -0.49
RPAIN-205ENST00000536255 DGCR6Q14129 220 aa12.01□□□□□ -0.49
RPAIN-205ENST00000536255 POU4F3Q15319 338 aa12.01□□□□□ -0.49
RPAIN-205ENST00000536255 ZNF730Q6ZMV8 503 aa12.01□□□□□ -0.49
RPAIN-205ENST00000536255 BEND4Q6ZU67 534 aa12.01□□□□□ -0.49
RPAIN-205ENST00000536255 PIWIL3Q7Z3Z3 882 aaKnown RBP12.01□□□□□ -0.49
RPAIN-205ENST00000536255 TMEM200AQ86VY9 491 aa12.01□□□□□ -0.49
RPAIN-205ENST00000536255 ZNF100Q8IYN0 542 aa12.01□□□□□ -0.49
RPAIN-205ENST00000536255 CDK20Q8IZL9 346 aa12.01□□□□□ -0.49
RPAIN-205ENST00000536255 ZNF610Q8N9Z0 462 aa12.01□□□□□ -0.49
RPAIN-205ENST00000536255 OR9K2Q8NGE7 335 aa12.01□□□□□ -0.49
RPAIN-205ENST00000536255 OR5J2Q8NH18 312 aa12.01□□□□□ -0.49
RPAIN-205ENST00000536255 ACOT11Q8WXI4 607 aaPredicted RBP12.01□□□□□ -0.49
RPAIN-205ENST00000536255 SGTBQ96EQ0 304 aa12.01□□□□□ -0.49
RPAIN-205ENST00000536255 OXGR1Q96P68 337 aa12.01□□□□□ -0.49
RPAIN-205ENST00000536255 MOGAT1Q96PD6 335 aa12.01□□□□□ -0.49
RPAIN-205ENST00000536255 C12orf49Q9H741 205 aa12.01□□□□□ -0.49
RPAIN-205ENST00000536255 KRCC1Q9NPI7 259 aaPredicted RBP12.01□□□□□ -0.49
RPAIN-205ENST00000536255 MAN2C1Q9NTJ4 1040 aa12.01□□□□□ -0.49
RPAIN-205ENST00000536255 ELOVL5Q9NYP7 299 aa12.01□□□□□ -0.49
RPAIN-205ENST00000536255 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.01□□□□□ -0.49
RPAIN-205ENST00000536255 ING1Q9UK53 422 aaPredicted RBP12.01□□□□□ -0.49
RPAIN-205ENST00000536255 POMPQ9Y244 141 aa12.01□□□□□ -0.49
RPAIN-205ENST00000536255 TACC2O95359 2948 aa12.01□□□□□ -0.49
RPAIN-205ENST00000536255 CSMD2Q7Z408 3487 aa12□□□□□ -0.49
RPAIN-205ENST00000536255 LOC102725191A0A1B0GVB3 256 aa12□□□□□ -0.49
RPAIN-205ENST00000536255 ENO4A6NNW6 628 aa12□□□□□ -0.49
RPAIN-205ENST00000536255 AKAP8O43823 692 aaKnown RBP12□□□□□ -0.49
RPAIN-205ENST00000536255 RAMP1O60894 148 aa12□□□□□ -0.49
RPAIN-205ENST00000536255 MRPL33O75394 65 aaKnown RBP12□□□□□ -0.49
RPAIN-205ENST00000536255 CTAG2O75638 210 aa12□□□□□ -0.49
RPAIN-205ENST00000536255 OR6A2O95222 327 aa12□□□□□ -0.49
RPAIN-205ENST00000536255 EPXP11678 715 aa12□□□□□ -0.49
RPAIN-205ENST00000536255 POU2F1P14859 743 aa12□□□□□ -0.49
RPAIN-205ENST00000536255 CBLP22681 906 aa12□□□□□ -0.49
RPAIN-205ENST00000536255 P2RY4P51582 365 aa12□□□□□ -0.49
RPAIN-205ENST00000536255 SPIBQ01892 262 aa12□□□□□ -0.49
RPAIN-205ENST00000536255 PUDPQ08623 228 aa12□□□□□ -0.49
RPAIN-205ENST00000536255 FAM27E3Q08E93 113 aa12□□□□□ -0.49
RPAIN-205ENST00000536255 C1DQ13901 141 aaKnown RBP12□□□□□ -0.49
RPAIN-205ENST00000536255 FGD3Q5JSP0 725 aa12□□□□□ -0.49
RPAIN-205ENST00000536255 TFAP2EQ6VUC0 442 aa12□□□□□ -0.49
RPAIN-205ENST00000536255 NUFIP2Q7Z417 695 aaKnown RBP12□□□□□ -0.49
RPAIN-205ENST00000536255 TSEN54Q7Z6J9 526 aaKnown RBP12□□□□□ -0.49
RPAIN-205ENST00000536255 SPATA24Q86W54 205 aa12□□□□□ -0.49
RPAIN-205ENST00000536255 PFN4Q8NHR9 129 aa12□□□□□ -0.49
RPAIN-205ENST00000536255 LINC01560Q8TB33 94 aa12□□□□□ -0.49
RPAIN-205ENST00000536255 TMEM45BQ96B21 275 aa12□□□□□ -0.49
RPAIN-205ENST00000536255 APH1AQ96BI3 265 aa12□□□□□ -0.49
RPAIN-205ENST00000536255 ZNF775Q96BV0 537 aaPredicted RBP12□□□□□ -0.49
RPAIN-205ENST00000536255 MEPEQ9NQ76 525 aaPredicted RBP12□□□□□ -0.49
RPAIN-205ENST00000536255 SLC7A8Q9UHI5 535 aa12□□□□□ -0.49
RPAIN-205ENST00000536255 FLVCR1Q9Y5Y0 555 aa12□□□□□ -0.49
RPAIN-205ENST00000536255 DHRS12A0PJE2 317 aa11.99□□□□□ -0.49
RPAIN-205ENST00000536255 SH3D21A4FU49 640 aa11.99□□□□□ -0.49
RPAIN-205ENST00000536255 A6NNC1 897 aa11.99□□□□□ -0.49
RPAIN-205ENST00000536255 CIB2O75838 187 aa11.99□□□□□ -0.49
RPAIN-205ENST00000536255 KRT36O76013 467 aa11.99□□□□□ -0.49
RPAIN-205ENST00000536255 OR7A10O76100 309 aa11.99□□□□□ -0.49
RPAIN-205ENST00000536255 DIRAS1O95057 198 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms