RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 CENPVL1A0A0U1RR11 272 aa16.47■□□□□ 0.23
RAB40C-203ENST00000535977 DAPL1A0PJW8 107 aa16.47■□□□□ 0.23
RAB40C-203ENST00000535977 S100A6P06703 90 aa16.47■□□□□ 0.23
RAB40C-203ENST00000535977 GKN3PP0CG01 181 aa16.47■□□□□ 0.23
RAB40C-203ENST00000535977 NPR2P20594 1047 aa16.47■□□□□ 0.23
RAB40C-203ENST00000535977 UBE2IP63279 158 aaKnown RBP16.47■□□□□ 0.23
RAB40C-203ENST00000535977 ZNF528Q3MIS6 628 aa16.47■□□□□ 0.23
RAB40C-203ENST00000535977 HACD4Q5VWC8 232 aa16.47■□□□□ 0.23
RAB40C-203ENST00000535977 PYHIN1Q6K0P9 492 aa16.47■□□□□ 0.23
RAB40C-203ENST00000535977 TMEM88Q6PEY1 159 aa16.47■□□□□ 0.23
RAB40C-203ENST00000535977 SIRT6Q8N6T7 355 aa16.47■□□□□ 0.23
RAB40C-203ENST00000535977 ALG8Q9BVK2 526 aa16.47■□□□□ 0.23
RAB40C-203ENST00000535977 GSN-AS1Q9NRJ2 163 aa16.47■□□□□ 0.23
RAB40C-203ENST00000535977 IL20RAQ9UHF4 553 aa16.47■□□□□ 0.23
RAB40C-203ENST00000535977 KCNE5Q9UJ90 142 aa16.47■□□□□ 0.23
RAB40C-203ENST00000535977 SIGLEC7Q9Y286 467 aa16.47■□□□□ 0.23
RAB40C-203ENST00000535977 SLC35A3Q9Y2D2 325 aa16.47■□□□□ 0.23
RAB40C-203ENST00000535977 A0A0B4J203 849 aa16.46■□□□□ 0.23
RAB40C-203ENST00000535977 ZNF860A6NHJ4 632 aa16.46■□□□□ 0.23
RAB40C-203ENST00000535977 EPOPA6NHQ4 379 aa16.46■□□□□ 0.23
RAB40C-203ENST00000535977 SGCEO43556 437 aa16.46■□□□□ 0.23
RAB40C-203ENST00000535977 ATG12O94817 140 aa16.46■□□□□ 0.23
RAB40C-203ENST00000535977 RLN2P04090 185 aa16.46■□□□□ 0.23
RAB40C-203ENST00000535977 WNT1P04628 370 aa16.46■□□□□ 0.23
RAB40C-203ENST00000535977 GABRA1P14867 456 aa16.46■□□□□ 0.23
RAB40C-203ENST00000535977 S100A11P31949 105 aa16.46■□□□□ 0.23
RAB40C-203ENST00000535977 SHC2P98077 582 aa16.46■□□□□ 0.23
RAB40C-203ENST00000535977 FOXK2Q01167 660 aa16.46■□□□□ 0.23
RAB40C-203ENST00000535977 HTR4Q13639 388 aa16.46■□□□□ 0.23
RAB40C-203ENST00000535977 SWI5Q1ZZU3 235 aa16.46■□□□□ 0.23
RAB40C-203ENST00000535977 HBMQ6B0K9 141 aa16.46■□□□□ 0.23
RAB40C-203ENST00000535977 FIP1L1Q6UN15 594 aaKnown RBP16.46■□□□□ 0.23
RAB40C-203ENST00000535977 WDR88Q6ZMY6 472 aa16.46■□□□□ 0.23
RAB40C-203ENST00000535977 OR4C6Q8NH72 309 aa16.46■□□□□ 0.23
RAB40C-203ENST00000535977 KCTD12Q96CX2 325 aaKnown RBP16.46■□□□□ 0.23
RAB40C-203ENST00000535977 MRPS2Q9Y399 296 aaKnown RBP16.46■□□□□ 0.23
RAB40C-203ENST00000535977 RIIAD1A6NNX1 92 aa16.46■□□□□ 0.22
RAB40C-203ENST00000535977 RFXAPO00287 272 aa16.46■□□□□ 0.22
RAB40C-203ENST00000535977 PEX12O00623 359 aa16.46■□□□□ 0.22
RAB40C-203ENST00000535977 PEX14O75381 377 aa16.46■□□□□ 0.22
RAB40C-203ENST00000535977 SNAPINO95295 136 aa16.46■□□□□ 0.22
RAB40C-203ENST00000535977 HPP00738 406 aa16.46■□□□□ 0.22
RAB40C-203ENST00000535977 MT-ND5P03915 603 aa16.46■□□□□ 0.22
RAB40C-203ENST00000535977 FXYD6P3P58550 94 aa16.46■□□□□ 0.22
RAB40C-203ENST00000535977 POU4F2Q12837 409 aa16.46■□□□□ 0.22
RAB40C-203ENST00000535977 MELKQ14680 651 aa16.46■□□□□ 0.22
RAB40C-203ENST00000535977 ZNHIT3Q15649 155 aaPredicted RBP16.46■□□□□ 0.22
RAB40C-203ENST00000535977 VASNQ6EMK4 673 aa16.46■□□□□ 0.22
RAB40C-203ENST00000535977 CHRDL2Q6WN34 429 aa16.46■□□□□ 0.22
RAB40C-203ENST00000535977 PFN4Q8NHR9 129 aa16.46■□□□□ 0.22
RAB40C-203ENST00000535977 LRFN5Q96NI6 719 aa16.46■□□□□ 0.22
RAB40C-203ENST00000535977 CCDC3Q9BQI4 270 aa16.46■□□□□ 0.22
RAB40C-203ENST00000535977 IFT27Q9BW83 186 aa16.46■□□□□ 0.22
RAB40C-203ENST00000535977 TRIM2Q9C040 744 aa16.46■□□□□ 0.22
RAB40C-203ENST00000535977 ACTR6Q9GZN1 396 aa16.46■□□□□ 0.22
RAB40C-203ENST00000535977 EXOSC3Q9NQT5 275 aaKnown RBP16.46■□□□□ 0.22
RAB40C-203ENST00000535977 HAO2Q9NYQ3 351 aa16.46■□□□□ 0.22
RAB40C-203ENST00000535977 RASD1Q9Y272 281 aa16.46■□□□□ 0.22
RAB40C-203ENST00000535977 TRABD2BA6NFA1 517 aa16.45■□□□□ 0.22
RAB40C-203ENST00000535977 FAM183AA6NL82 134 aa16.45■□□□□ 0.22
RAB40C-203ENST00000535977 EIF3GO75821 320 aaKnown RBP eCLIP16.45■□□□□ 0.22
RAB40C-203ENST00000535977 THBS2P35442 1172 aa16.45■□□□□ 0.22
RAB40C-203ENST00000535977 GK2Q14410 553 aaPredicted RBP16.45■□□□□ 0.22
RAB40C-203ENST00000535977 OR5M10Q6IEU7 315 aa16.45■□□□□ 0.22
RAB40C-203ENST00000535977 TMUB2Q71RG4 321 aa16.45■□□□□ 0.22
RAB40C-203ENST00000535977 ANKRD9Q96BM1 317 aaPredicted RBP16.45■□□□□ 0.22
RAB40C-203ENST00000535977 NDC1Q9BTX1 674 aa16.45■□□□□ 0.22
RAB40C-203ENST00000535977 EMC3Q9P0I2 261 aa16.45■□□□□ 0.22
RAB40C-203ENST00000535977 BLACEA4D250 179 aa16.45■□□□□ 0.22
RAB40C-203ENST00000535977 PRAMEF26H0Y7S4 382 aa16.45■□□□□ 0.22
RAB40C-203ENST00000535977 ACAA1P09110 424 aaPredicted RBP16.45■□□□□ 0.22
RAB40C-203ENST00000535977 SAGP10523 405 aaPredicted RBP16.45■□□□□ 0.22
RAB40C-203ENST00000535977 SKP1P63208 163 aa16.45■□□□□ 0.22
RAB40C-203ENST00000535977 E2F1Q01094 437 aa16.45■□□□□ 0.22
RAB40C-203ENST00000535977 FZD5Q13467 585 aa16.45■□□□□ 0.22
RAB40C-203ENST00000535977 GAS6Q14393 721 aa16.45■□□□□ 0.22
RAB40C-203ENST00000535977 MTFR2Q6P444 385 aa16.45■□□□□ 0.22
RAB40C-203ENST00000535977 FIGNL1Q6PIW4 674 aa16.45■□□□□ 0.22
RAB40C-203ENST00000535977 CMIPQ8IY22 773 aa16.45■□□□□ 0.22
RAB40C-203ENST00000535977 ZFP3Q96NJ6 502 aa16.45■□□□□ 0.22
RAB40C-203ENST00000535977 TEAD3Q99594 435 aa16.45■□□□□ 0.22
RAB40C-203ENST00000535977 LMF2Q9BU23 707 aaKnown RBP16.45■□□□□ 0.22
RAB40C-203ENST00000535977 NPDC1Q9NQX5 325 aaPredicted RBP16.45■□□□□ 0.22
RAB40C-203ENST00000535977 C20orf141Q9NUB4 165 aa16.45■□□□□ 0.22
RAB40C-203ENST00000535977 TMEM74BQ9NUR3 256 aa16.45■□□□□ 0.22
RAB40C-203ENST00000535977 ECDO95905 644 aaPredicted RBP16.44■□□□□ 0.22
RAB40C-203ENST00000535977 LSSP48449 732 aa16.44■□□□□ 0.22
RAB40C-203ENST00000535977 CENPAP49450 140 aa16.44■□□□□ 0.22
RAB40C-203ENST00000535977 RAB30Q15771 203 aa16.44■□□□□ 0.22
RAB40C-203ENST00000535977 ARMC6Q6NXE6 501 aa16.44■□□□□ 0.22
RAB40C-203ENST00000535977 TPRA1Q86W33 373 aa16.44■□□□□ 0.22
RAB40C-203ENST00000535977 TMEM52Q8NDY8 209 aa16.44■□□□□ 0.22
RAB40C-203ENST00000535977 SFT2D1Q8WV19 159 aa16.44■□□□□ 0.22
RAB40C-203ENST00000535977 PIGKQ92643 395 aa16.44■□□□□ 0.22
RAB40C-203ENST00000535977 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.44■□□□□ 0.22
RAB40C-203ENST00000535977 FBXO34Q9NWN3 711 aa16.44■□□□□ 0.22
RAB40C-203ENST00000535977 CLEC1BQ9P126 229 aa16.44■□□□□ 0.22
RAB40C-203ENST00000535977 CLEC4AQ9UMR7 237 aa16.44■□□□□ 0.22
RAB40C-203ENST00000535977 A0A0B4J2E0 115 aa16.44■□□□□ 0.22
RAB40C-203ENST00000535977 A0A1B0GX12 115 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms