RNA–Protein interactions for RNA: ENST00000535659.6

CNN1-202, Transcript of calponin 1, humanhuman

TSL 2 BASIC

Gene CNN1, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-202ENST00000535659 RASD1Q9Y272 281 aa13.9□□□□□ -0.18
CNN1-202ENST00000535659 RP1L1Q8IWN7 2480 aaPredicted RBP13.9□□□□□ -0.18
CNN1-202ENST00000535659 LOC102725191A0A1B0GVB3 256 aa13.9□□□□□ -0.19
CNN1-202ENST00000535659 MBD3L4A6NDZ8 208 aaPredicted RBP13.9□□□□□ -0.19
CNN1-202ENST00000535659 MBD3L3A6NE82 208 aaPredicted RBP13.9□□□□□ -0.19
CNN1-202ENST00000535659 MBD3L5A6NJ08 208 aaPredicted RBP13.9□□□□□ -0.19
CNN1-202ENST00000535659 RAMP1O60894 148 aa13.9□□□□□ -0.19
CNN1-202ENST00000535659 ADAP00813 363 aa13.9□□□□□ -0.19
CNN1-202ENST00000535659 TSPAN19P0C672 248 aa13.9□□□□□ -0.19
CNN1-202ENST00000535659 GLI4P10075 376 aa13.9□□□□□ -0.19
CNN1-202ENST00000535659 GSTM3P21266 225 aa13.9□□□□□ -0.19
CNN1-202ENST00000535659 TIMP3P35625 211 aa13.9□□□□□ -0.19
CNN1-202ENST00000535659 RASGEF1BQ0VAM2 473 aa13.9□□□□□ -0.19
CNN1-202ENST00000535659 COX10Q12887 443 aa13.9□□□□□ -0.19
CNN1-202ENST00000535659 FHL1Q13642 323 aa13.9□□□□□ -0.19
CNN1-202ENST00000535659 PDK3Q15120 406 aa13.9□□□□□ -0.19
CNN1-202ENST00000535659 RNPS1Q15287 305 aaKnown RBP13.9□□□□□ -0.19
CNN1-202ENST00000535659 TMEM211Q6ICI0 200 aa13.9□□□□□ -0.19
CNN1-202ENST00000535659 CD300LDQ6UXZ3 194 aa13.9□□□□□ -0.19
CNN1-202ENST00000535659 SEM1Q6ZVN7 128 aa13.9□□□□□ -0.19
CNN1-202ENST00000535659 NANOGNBQ7Z5D8 188 aa13.9□□□□□ -0.19
CNN1-202ENST00000535659 MCEMP1Q8IX19 187 aa13.9□□□□□ -0.19
CNN1-202ENST00000535659 RPRMLQ8N4K4 120 aa13.9□□□□□ -0.19
CNN1-202ENST00000535659 ATG16L2Q8NAA4 619 aa13.9□□□□□ -0.19
CNN1-202ENST00000535659 OR13C2Q8NGS9 318 aa13.9□□□□□ -0.19
CNN1-202ENST00000535659 MBD3L2Q8NHZ7 208 aaPredicted RBP13.9□□□□□ -0.19
CNN1-202ENST00000535659 OXGR1Q96P68 337 aa13.9□□□□□ -0.19
CNN1-202ENST00000535659 NIPSNAP1Q9BPW8 284 aa13.9□□□□□ -0.19
CNN1-202ENST00000535659 SF3B5Q9BWJ5 86 aaKnown RBP13.9□□□□□ -0.19
CNN1-202ENST00000535659 OSBPL10Q9BXB5 764 aa13.9□□□□□ -0.19
CNN1-202ENST00000535659 ZNF556Q9HAH1 456 aa13.9□□□□□ -0.19
CNN1-202ENST00000535659 KLHL9Q9P2J3 617 aa13.9□□□□□ -0.19
CNN1-202ENST00000535659 KLHL13Q9P2N7 655 aa13.9□□□□□ -0.19
CNN1-202ENST00000535659 NKX1-2Q9UD57 310 aaPredicted RBP13.9□□□□□ -0.19
CNN1-202ENST00000535659 SIGLEC7Q9Y286 467 aa13.9□□□□□ -0.19
CNN1-202ENST00000535659 HIF3AQ9Y2N7 669 aa13.9□□□□□ -0.19
CNN1-202ENST00000535659 MEMO1Q9Y316 297 aa13.9□□□□□ -0.19
CNN1-202ENST00000535659 MPDZO75970 2070 aa13.89□□□□□ -0.19
CNN1-202ENST00000535659 TRAV27A0A087WT01 109 aa13.89□□□□□ -0.19
CNN1-202ENST00000535659 ZNF716A6NP11 495 aa13.89□□□□□ -0.19
CNN1-202ENST00000535659 PDLIM1O00151 329 aa13.89□□□□□ -0.19
CNN1-202ENST00000535659 CCL21O00585 134 aa13.89□□□□□ -0.19
CNN1-202ENST00000535659 RCBTB2O95199 551 aa13.89□□□□□ -0.19
CNN1-202ENST00000535659 AHCYP23526 432 aa13.89□□□□□ -0.19
CNN1-202ENST00000535659 AQP2P41181 271 aa13.89□□□□□ -0.19
CNN1-202ENST00000535659 UQCRFS1P47985 274 aa13.89□□□□□ -0.19
CNN1-202ENST00000535659 DAPP51397 102 aa13.89□□□□□ -0.19
CNN1-202ENST00000535659 PRPS1P60891 318 aa13.89□□□□□ -0.19
CNN1-202ENST00000535659 RPS4XP62701 263 aaKnown RBP13.89□□□□□ -0.19
CNN1-202ENST00000535659 PUDPQ08623 228 aa13.89□□□□□ -0.19
CNN1-202ENST00000535659 PMPCAQ10713 525 aa13.89□□□□□ -0.19
CNN1-202ENST00000535659 SLC17A1Q14916 467 aa13.89□□□□□ -0.19
CNN1-202ENST00000535659 TAF11Q15544 211 aa13.89□□□□□ -0.19
CNN1-202ENST00000535659 ANKRD34AQ69YU3 496 aa13.89□□□□□ -0.19
CNN1-202ENST00000535659 OR2A2Q6IF42 318 aa13.89□□□□□ -0.19
CNN1-202ENST00000535659 FAHD1Q6P587 224 aa13.89□□□□□ -0.19
CNN1-202ENST00000535659 PXKQ7Z7A4 578 aa13.89□□□□□ -0.19
CNN1-202ENST00000535659 GPAT4Q86UL3 456 aa13.89□□□□□ -0.19
CNN1-202ENST00000535659 C9orf106Q8NAJ2 232 aa13.89□□□□□ -0.19
CNN1-202ENST00000535659 ABHD3Q8WU67 409 aa13.89□□□□□ -0.19
CNN1-202ENST00000535659 CIB1Q99828 191 aa13.89□□□□□ -0.19
CNN1-202ENST00000535659 UCK2Q9BZX2 261 aa13.89□□□□□ -0.19
CNN1-202ENST00000535659 GABARAPL1Q9H0R8 117 aa13.89□□□□□ -0.19
CNN1-202ENST00000535659 SMURF2Q9HAU4 748 aa13.89□□□□□ -0.19
CNN1-202ENST00000535659 RNPEPL1Q9HAU8 725 aa13.89□□□□□ -0.19
CNN1-202ENST00000535659 FANCFQ9NPI8 374 aa13.89□□□□□ -0.19
CNN1-202ENST00000535659 GLRX2Q9NS18 164 aa13.89□□□□□ -0.19
CNN1-202ENST00000535659 POLEQ07864 2286 aa13.88□□□□□ -0.19
CNN1-202ENST00000535659 RELNP78509 3460 aa13.88□□□□□ -0.19
CNN1-202ENST00000535659 A0A1B0GUH1 482 aa13.88□□□□□ -0.19
CNN1-202ENST00000535659 RNF13O43567 381 aa13.88□□□□□ -0.19
CNN1-202ENST00000535659 TOXO94900 526 aa13.88□□□□□ -0.19
CNN1-202ENST00000535659 HPRP00739 348 aa13.88□□□□□ -0.19
CNN1-202ENST00000535659 IL2RAP01589 272 aa13.88□□□□□ -0.19
CNN1-202ENST00000535659 YES1P07947 543 aa13.88□□□□□ -0.19
CNN1-202ENST00000535659 UQCRC1P31930 480 aa13.88□□□□□ -0.19
CNN1-202ENST00000535659 CEACAM8P31997 349 aaPredicted RBP13.88□□□□□ -0.19
CNN1-202ENST00000535659 SLC16A1P53985 500 aa13.88□□□□□ -0.19
CNN1-202ENST00000535659 SLC34A1Q06495 639 aa13.88□□□□□ -0.19
CNN1-202ENST00000535659 RPL18Q07020 188 aaKnown RBP13.88□□□□□ -0.19
CNN1-202ENST00000535659 ABLIM2Q6H8Q1 611 aa13.88□□□□□ -0.19
CNN1-202ENST00000535659 RASSF6Q6ZTQ3 369 aa13.88□□□□□ -0.19
CNN1-202ENST00000535659 MOSPD2Q8NHP6 518 aa13.88□□□□□ -0.19
CNN1-202ENST00000535659 EME1Q96AY2 570 aa13.88□□□□□ -0.19
CNN1-202ENST00000535659 DMRTA2Q96SC8 542 aa13.88□□□□□ -0.19
CNN1-202ENST00000535659 C9orf16Q9BUW7 83 aa13.88□□□□□ -0.19
CNN1-202ENST00000535659 MCCC2Q9HCC0 563 aa13.88□□□□□ -0.19
CNN1-202ENST00000535659 GP6Q9HCN6 339 aa13.88□□□□□ -0.19
CNN1-202ENST00000535659 KIF17Q9P2E2 1029 aa13.88□□□□□ -0.19
CNN1-202ENST00000535659 B3GAT1Q9P2W7 334 aa13.88□□□□□ -0.19
CNN1-202ENST00000535659 ING1Q9UK53 422 aaPredicted RBP13.88□□□□□ -0.19
CNN1-202ENST00000535659 IGKV3D-15A0A087WSY6 115 aa13.87□□□□□ -0.19
CNN1-202ENST00000535659 A0A1W2PNV4 684 aa13.87□□□□□ -0.19
CNN1-202ENST00000535659 C11orf98E9PRG8 122 aa13.87□□□□□ -0.19
CNN1-202ENST00000535659 GPR171O14626 319 aa13.87□□□□□ -0.19
CNN1-202ENST00000535659 PLGP00747 810 aaPredicted RBP13.87□□□□□ -0.19
CNN1-202ENST00000535659 ZNF43P17038 809 aa13.87□□□□□ -0.19
CNN1-202ENST00000535659 PER3P56645 1201 aa13.87□□□□□ -0.19
CNN1-202ENST00000535659 IL1RL1Q01638 556 aa13.87□□□□□ -0.19
CNN1-202ENST00000535659 POU4F3Q15319 338 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms