RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 RORCP51449 518 aa11.15□□□□□ -0.62
SCARB1-204ENST00000535005 RUNX1T1Q06455 604 aa11.15□□□□□ -0.62
SCARB1-204ENST00000535005 COL28A1Q2UY09 1125 aa11.15□□□□□ -0.62
SCARB1-204ENST00000535005 MEDAGQ5VYS4 303 aa11.15□□□□□ -0.62
SCARB1-204ENST00000535005 SPATC1Q76KD6 591 aa11.15□□□□□ -0.62
SCARB1-204ENST00000535005 GALNTL5Q7Z4T8 443 aa11.15□□□□□ -0.62
SCARB1-204ENST00000535005 ATCAYQ86WG3 371 aa11.15□□□□□ -0.62
SCARB1-204ENST00000535005 RBM45Q8IUH3 476 aaKnown RBP11.15□□□□□ -0.62
SCARB1-204ENST00000535005 SULF2Q8IWU5 870 aa11.15□□□□□ -0.62
SCARB1-204ENST00000535005 LSMEM1Q8N8F7 131 aa11.15□□□□□ -0.62
SCARB1-204ENST00000535005 VANGL1Q8TAA9 524 aaPredicted RBP11.15□□□□□ -0.62
SCARB1-204ENST00000535005 ZNF559Q9BR84 538 aa11.15□□□□□ -0.62
SCARB1-204ENST00000535005 HES7Q9BYE0 225 aa11.15□□□□□ -0.62
SCARB1-204ENST00000535005 POLR2J2Q9GZM3 115 aaKnown RBP11.15□□□□□ -0.62
SCARB1-204ENST00000535005 POLR2J3Q9H1A7 115 aaKnown RBP11.15□□□□□ -0.62
SCARB1-204ENST00000535005 ZFP64Q9NPA5 681 aa11.15□□□□□ -0.62
SCARB1-204ENST00000535005 IMPAD1Q9NX62 359 aa11.15□□□□□ -0.62
SCARB1-204ENST00000535005 PAQR5Q9NXK6 330 aaPredicted RBP11.15□□□□□ -0.62
SCARB1-204ENST00000535005 NDUFAF4Q9P032 175 aa11.15□□□□□ -0.62
SCARB1-204ENST00000535005 HRH3Q9Y5N1 445 aa11.15□□□□□ -0.62
SCARB1-204ENST00000535005 ITPR1Q14643 2758 aa11.14□□□□□ -0.63
SCARB1-204ENST00000535005 USP24Q9UPU5 2620 aa11.14□□□□□ -0.63
SCARB1-204ENST00000535005 LRRC3CA6NJW4 275 aa11.14□□□□□ -0.63
SCARB1-204ENST00000535005 C17orf51A8MQB3 221 aa11.14□□□□□ -0.63
SCARB1-204ENST00000535005 G3V3Y1 287 aa11.14□□□□□ -0.63
SCARB1-204ENST00000535005 CBR3O75828 277 aa11.14□□□□□ -0.63
SCARB1-204ENST00000535005 CYP7B1O75881 506 aa11.14□□□□□ -0.63
SCARB1-204ENST00000535005 GKN3PP0CG01 181 aa11.14□□□□□ -0.63
SCARB1-204ENST00000535005 EPHA2P29317 976 aa11.14□□□□□ -0.63
SCARB1-204ENST00000535005 DLX5P56178 289 aa11.14□□□□□ -0.63
SCARB1-204ENST00000535005 ST3GAL4Q11206 333 aa11.14□□□□□ -0.63
SCARB1-204ENST00000535005 INPP5JQ15735 1006 aaPredicted RBP11.14□□□□□ -0.63
SCARB1-204ENST00000535005 HYAL4Q2M3T9 481 aa11.14□□□□□ -0.63
SCARB1-204ENST00000535005 NXNL2Q5VZ03 156 aa11.14□□□□□ -0.63
SCARB1-204ENST00000535005 RANBP3LQ86VV4 465 aaPredicted RBP11.14□□□□□ -0.63
SCARB1-204ENST00000535005 RBMXL3Q8N7X1 1067 aaKnown RBP11.14□□□□□ -0.63
SCARB1-204ENST00000535005 ZFP62Q8NB50 900 aaPredicted RBP11.14□□□□□ -0.63
SCARB1-204ENST00000535005 OR1J4Q8NGS1 313 aa11.14□□□□□ -0.63
SCARB1-204ENST00000535005 GPR119Q8TDV5 335 aa11.14□□□□□ -0.63
SCARB1-204ENST00000535005 NR4A3Q92570 626 aa11.14□□□□□ -0.63
SCARB1-204ENST00000535005 CNTNAP3BQ96NU0 1288 aa11.14□□□□□ -0.63
SCARB1-204ENST00000535005 MGLLQ99685 303 aa11.14□□□□□ -0.63
SCARB1-204ENST00000535005 DHRS9Q9BPW9 319 aa11.14□□□□□ -0.63
SCARB1-204ENST00000535005 ARHGAP9Q9BRR9 750 aa11.14□□□□□ -0.63
SCARB1-204ENST00000535005 CNTNAP3Q9BZ76 1288 aa11.14□□□□□ -0.63
SCARB1-204ENST00000535005 TRIM2Q9C040 744 aa11.14□□□□□ -0.63
SCARB1-204ENST00000535005 SRRQ9GZT4 340 aa11.14□□□□□ -0.63
SCARB1-204ENST00000535005 KLHL1Q9NR64 748 aa11.14□□□□□ -0.63
SCARB1-204ENST00000535005 MED11Q9P086 117 aa11.14□□□□□ -0.63
SCARB1-204ENST00000535005 AASSQ9UDR5 926 aa11.14□□□□□ -0.63
SCARB1-204ENST00000535005 BOKQ9UMX3 212 aaPredicted RBP11.14□□□□□ -0.63
SCARB1-204ENST00000535005 TP53TG5Q9Y2B4 290 aa11.14□□□□□ -0.63
SCARB1-204ENST00000535005 V9GYH0 126 aa11.14□□□□□ -0.63
SCARB1-204ENST00000535005 PINLYPA6NC86 204 aa11.14□□□□□ -0.63
SCARB1-204ENST00000535005 ETV2O00321 342 aaPredicted RBP11.14□□□□□ -0.63
SCARB1-204ENST00000535005 AP3D1O14617 1153 aa11.14□□□□□ -0.63
SCARB1-204ENST00000535005 GNB5O14775 395 aa11.14□□□□□ -0.63
SCARB1-204ENST00000535005 TMCC2O75069 709 aa11.14□□□□□ -0.63
SCARB1-204ENST00000535005 SEMA7AO75326 666 aa11.14□□□□□ -0.63
SCARB1-204ENST00000535005 GLSO94925 669 aaPredicted RBP11.14□□□□□ -0.63
SCARB1-204ENST00000535005 PTHP01270 115 aa11.14□□□□□ -0.63
SCARB1-204ENST00000535005 SCG5P05408 212 aa11.14□□□□□ -0.63
SCARB1-204ENST00000535005 FAM87AP0C7U9 286 aa11.14□□□□□ -0.63
SCARB1-204ENST00000535005 RHCEP18577 417 aa11.14□□□□□ -0.63
SCARB1-204ENST00000535005 PGCP20142 388 aa11.14□□□□□ -0.63
SCARB1-204ENST00000535005 RAB25P57735 213 aa11.14□□□□□ -0.63
SCARB1-204ENST00000535005 CDC42P60953 191 aa11.14□□□□□ -0.63
SCARB1-204ENST00000535005 TNK1Q13470 666 aa11.14□□□□□ -0.63
SCARB1-204ENST00000535005 CBFBQ13951 182 aa11.14□□□□□ -0.63
SCARB1-204ENST00000535005 ZNF169Q14929 603 aaPredicted RBP11.14□□□□□ -0.63
SCARB1-204ENST00000535005 OR5M10Q6IEU7 315 aa11.14□□□□□ -0.63
SCARB1-204ENST00000535005 RPUSD3Q6P087 351 aaKnown RBP11.14□□□□□ -0.63
SCARB1-204ENST00000535005 ASB18Q6ZVZ8 466 aa11.14□□□□□ -0.63
SCARB1-204ENST00000535005 CCDC28AQ8IWP9 274 aa11.14□□□□□ -0.63
SCARB1-204ENST00000535005 FAM109AQ8N4B1 249 aa11.14□□□□□ -0.63
SCARB1-204ENST00000535005 CLDN22Q8N7P3 220 aa11.14□□□□□ -0.63
SCARB1-204ENST00000535005 SPERTQ8NA61 448 aa11.14□□□□□ -0.63
SCARB1-204ENST00000535005 OR4K17Q8NGC6 315 aa11.14□□□□□ -0.63
SCARB1-204ENST00000535005 ZC3HAV1LQ96H79 300 aaKnown RBP11.14□□□□□ -0.63
SCARB1-204ENST00000535005 MCHR1Q99705 422 aa11.14□□□□□ -0.63
SCARB1-204ENST00000535005 PTGES2Q9H7Z7 377 aa11.14□□□□□ -0.63
SCARB1-204ENST00000535005 ZNF556Q9HAH1 456 aa11.14□□□□□ -0.63
SCARB1-204ENST00000535005 ACAD8Q9UKU7 415 aa11.14□□□□□ -0.63
SCARB1-204ENST00000535005 MRPS18CQ9Y3D5 142 aaKnown RBP11.14□□□□□ -0.63
SCARB1-204ENST00000535005 CMAHPQ9Y471 501 aa11.14□□□□□ -0.63
SCARB1-204ENST00000535005 NINQ8N4C6 2090 aa11.13□□□□□ -0.63
SCARB1-204ENST00000535005 A0A087WZY1 265 aa11.13□□□□□ -0.63
SCARB1-204ENST00000535005 TNFRSF11BO00300 401 aa11.13□□□□□ -0.63
SCARB1-204ENST00000535005 STSP08842 583 aa11.13□□□□□ -0.63
SCARB1-204ENST00000535005 PTBP1P26599 531 aaKnown RBP eCLIP11.13□□□□□ -0.635e-7■■■■■ 52.1
SCARB1-204ENST00000535005 HTR2AP28223 471 aa11.13□□□□□ -0.63
SCARB1-204ENST00000535005 GPR85P60893 370 aa11.13□□□□□ -0.63
SCARB1-204ENST00000535005 HOXC5Q00444 222 aa11.13□□□□□ -0.63
SCARB1-204ENST00000535005 GANABQ14697 944 aaKnown RBP11.13□□□□□ -0.63
SCARB1-204ENST00000535005 LAPTM4AQ15012 233 aa11.13□□□□□ -0.63
SCARB1-204ENST00000535005 SMUG1Q53HV7 270 aa11.13□□□□□ -0.63
SCARB1-204ENST00000535005 SLC25A53Q5H9E4 307 aa11.13□□□□□ -0.63
SCARB1-204ENST00000535005 CREB3L2Q70SY1 520 aa11.13□□□□□ -0.63
SCARB1-204ENST00000535005 OR10G2Q8NGC3 310 aa11.13□□□□□ -0.63
SCARB1-204ENST00000535005 OR4C15Q8NGM1 316 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms