RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 POGLUT1Q8NBL1 392 aa8.32□□□□□ -1.08
SF3B2-216ENST00000534765 EDARADDQ8WWZ3 215 aa8.32□□□□□ -1.08
SF3B2-216ENST00000534765 TM4SF18Q96CE8 201 aa8.32□□□□□ -1.08
SF3B2-216ENST00000534765 ZNF514Q96K75 400 aaPredicted RBP8.32□□□□□ -1.08
SF3B2-216ENST00000534765 YIPF4Q9BSR8 244 aa8.32□□□□□ -1.08
SF3B2-216ENST00000534765 SLC38A1Q9H2H9 487 aa8.32□□□□□ -1.08
SF3B2-216ENST00000534765 PHPT1Q9NRX4 125 aaPredicted RBP8.32□□□□□ -1.08
SF3B2-216ENST00000534765 GPR27Q9NS67 375 aa8.32□□□□□ -1.08
SF3B2-216ENST00000534765 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.32□□□□□ -1.08
SF3B2-216ENST00000534765 FER1L5A0AVI2 2057 aa8.32□□□□□ -1.08
SF3B2-216ENST00000534765 QSOX1O00391 747 aa8.31□□□□□ -1.08
SF3B2-216ENST00000534765 OR1F1O43749 312 aa8.31□□□□□ -1.08
SF3B2-216ENST00000534765 NTN1O95631 604 aa8.31□□□□□ -1.08
SF3B2-216ENST00000534765 ETFAP13804 333 aa8.31□□□□□ -1.08
SF3B2-216ENST00000534765 DAOP14920 347 aa8.31□□□□□ -1.08
SF3B2-216ENST00000534765 ACTR1BP42025 376 aa8.31□□□□□ -1.08
SF3B2-216ENST00000534765 ACTR1AP61163 376 aa8.31□□□□□ -1.08
SF3B2-216ENST00000534765 ACY1Q03154 408 aa8.31□□□□□ -1.08
SF3B2-216ENST00000534765 MAD2L1Q13257 205 aaPredicted RBP8.31□□□□□ -1.08
SF3B2-216ENST00000534765 FCRL6Q6DN72 434 aa8.31□□□□□ -1.08
SF3B2-216ENST00000534765 WDR53Q7Z5U6 358 aaPredicted RBP8.31□□□□□ -1.08
SF3B2-216ENST00000534765 ZNF615Q8N8J6 731 aa8.31□□□□□ -1.08
SF3B2-216ENST00000534765 UBAC2Q8NBM4 344 aa8.31□□□□□ -1.08
SF3B2-216ENST00000534765 OR1S2Q8NGQ3 325 aa8.31□□□□□ -1.08
SF3B2-216ENST00000534765 CD300LFQ8TDQ1 290 aa8.31□□□□□ -1.08
SF3B2-216ENST00000534765 GTF3AQ92664 365 aaKnown RBP8.31□□□□□ -1.08
SF3B2-216ENST00000534765 RAB3CQ96E17 227 aa8.31□□□□□ -1.08
SF3B2-216ENST00000534765 WDR89Q96FK6 387 aaPredicted RBP8.31□□□□□ -1.08
SF3B2-216ENST00000534765 SLITRK2Q9H156 845 aa8.31□□□□□ -1.08
SF3B2-216ENST00000534765 CXorf36Q9H7Y0 433 aa8.31□□□□□ -1.08
SF3B2-216ENST00000534765 MAP4K5Q9Y4K4 846 aa8.31□□□□□ -1.08
SF3B2-216ENST00000534765 AHCTF1Q8WYP5 2266 aa8.31□□□□□ -1.08
SF3B2-216ENST00000534765 GNG14A0A1W2PPG7 69 aa8.31□□□□□ -1.08
SF3B2-216ENST00000534765 TMEM72A0PK05 275 aa8.31□□□□□ -1.08
SF3B2-216ENST00000534765 CPSF4LA6NMK7 179 aaKnown RBP8.31□□□□□ -1.08
SF3B2-216ENST00000534765 LRRN3E7EW58 273 aa8.31□□□□□ -1.08
SF3B2-216ENST00000534765 RAB3DO95716 219 aa8.31□□□□□ -1.08
SF3B2-216ENST00000534765 HLA-DPB1P04440 258 aa8.31□□□□□ -1.08
SF3B2-216ENST00000534765 UBCP0CG48 685 aaKnown RBP8.31□□□□□ -1.08
SF3B2-216ENST00000534765 LIPCP11150 499 aa8.31□□□□□ -1.08
SF3B2-216ENST00000534765 HNRNPA2B1P22626 353 aaKnown RBP8.31□□□□□ -1.08
SF3B2-216ENST00000534765 LIMK1P53667 647 aa8.31□□□□□ -1.08
SF3B2-216ENST00000534765 BPIFB3P59826 476 aa8.31□□□□□ -1.08
SF3B2-216ENST00000534765 PRDX1Q06830 199 aaKnown RBP8.31□□□□□ -1.08
SF3B2-216ENST00000534765 ACSM2AQ08AH3 577 aa8.31□□□□□ -1.08
SF3B2-216ENST00000534765 SPIN4Q56A73 249 aa8.31□□□□□ -1.08
SF3B2-216ENST00000534765 ACSM2BQ68CK6 577 aa8.31□□□□□ -1.08
SF3B2-216ENST00000534765 FBXO42Q6P3S6 717 aa8.31□□□□□ -1.08
SF3B2-216ENST00000534765 LRP11Q86VZ4 500 aa8.31□□□□□ -1.08
SF3B2-216ENST00000534765 OR9A2Q8NGT5 310 aa8.31□□□□□ -1.08
SF3B2-216ENST00000534765 NECAB3Q96P71 396 aaPredicted RBP8.31□□□□□ -1.08
SF3B2-216ENST00000534765 C20orf85Q9H1P6 137 aa8.31□□□□□ -1.08
SF3B2-216ENST00000534765 KCNH6Q9H252 994 aa8.31□□□□□ -1.08
SF3B2-216ENST00000534765 LRRN3Q9H3W5 708 aa8.31□□□□□ -1.08
SF3B2-216ENST00000534765 BRF2Q9HAW0 419 aa8.31□□□□□ -1.08
SF3B2-216ENST00000534765 SLC2A4RGQ9NR83 387 aa8.31□□□□□ -1.08
SF3B2-216ENST00000534765 ZNF223Q9UK11 482 aaPredicted RBP8.31□□□□□ -1.08
SF3B2-216ENST00000534765 hCG_1809904A0A1W2PP81 198 aa8.31□□□□□ -1.08
SF3B2-216ENST00000534765 A0A1W2PR64 198 aa8.31□□□□□ -1.08
SF3B2-216ENST00000534765 A0A1W2PRV1 198 aa8.31□□□□□ -1.08
SF3B2-216ENST00000534765 MCRIP1C9JLW8 97 aa8.31□□□□□ -1.08
SF3B2-216ENST00000534765 SUSD5O60279 629 aa8.31□□□□□ -1.08
SF3B2-216ENST00000534765 SLC19A2O60779 497 aa8.31□□□□□ -1.08
SF3B2-216ENST00000534765 CLN5O75503 358 aa8.31□□□□□ -1.08
SF3B2-216ENST00000534765 IL33O95760 270 aa8.31□□□□□ -1.08
SF3B2-216ENST00000534765 CSN2P05814 226 aa8.31□□□□□ -1.08
SF3B2-216ENST00000534765 SLC6A1P30531 599 aa8.31□□□□□ -1.08
SF3B2-216ENST00000534765 REEP5Q00765 189 aa8.31□□□□□ -1.08
SF3B2-216ENST00000534765 FABP5Q01469 135 aa8.31□□□□□ -1.08
SF3B2-216ENST00000534765 RELQ04864 619 aaPredicted RBP8.31□□□□□ -1.08
SF3B2-216ENST00000534765 PDE7AQ13946 482 aa8.31□□□□□ -1.08
SF3B2-216ENST00000534765 KIAA0141Q14154 515 aaPredicted RBP8.31□□□□□ -1.08
SF3B2-216ENST00000534765 UBXN2BQ14CS0 331 aa8.31□□□□□ -1.08
SF3B2-216ENST00000534765 TMEM200AQ86VY9 491 aa8.31□□□□□ -1.08
SF3B2-216ENST00000534765 MCATQ8IVS2 390 aaKnown RBP8.31□□□□□ -1.08
SF3B2-216ENST00000534765 TMEM52Q8NDY8 209 aa8.31□□□□□ -1.08
SF3B2-216ENST00000534765 OR8J2Q8NGG1 315 aa8.31□□□□□ -1.08
SF3B2-216ENST00000534765 OR1S1Q8NH92 325 aa8.31□□□□□ -1.08
SF3B2-216ENST00000534765 TMEM163Q8TC26 289 aa8.31□□□□□ -1.08
SF3B2-216ENST00000534765 ARSGQ96EG1 525 aa8.31□□□□□ -1.08
SF3B2-216ENST00000534765 OR2M4Q96R27 311 aa8.31□□□□□ -1.08
SF3B2-216ENST00000534765 TIMM29Q9BSF4 260 aa8.31□□□□□ -1.08
SF3B2-216ENST00000534765 FAIM2Q9BWQ8 316 aa8.31□□□□□ -1.08
SF3B2-216ENST00000534765 POLDIP3Q9BY77 421 aaKnown RBP8.31□□□□□ -1.08
SF3B2-216ENST00000534765 FAM60AQ9NP50 221 aa8.31□□□□□ -1.08
SF3B2-216ENST00000534765 SIRT3Q9NTG7 399 aaPredicted RBP8.31□□□□□ -1.08
SF3B2-216ENST00000534765 SLCO1C1Q9NYB5 712 aa8.31□□□□□ -1.08
SF3B2-216ENST00000534765 IL20RAQ9UHF4 553 aa8.31□□□□□ -1.08
SF3B2-216ENST00000534765 CABIN1Q9Y6J0 2220 aa8.31□□□□□ -1.08
SF3B2-216ENST00000534765 H3BSH0 61 aa8.3□□□□□ -1.08
SF3B2-216ENST00000534765 FOXE1O00358 373 aaPredicted RBP8.3□□□□□ -1.08
SF3B2-216ENST00000534765 RAB28P51157 221 aa8.3□□□□□ -1.08
SF3B2-216ENST00000534765 CRB2Q5IJ48 1285 aa8.3□□□□□ -1.08
SF3B2-216ENST00000534765 ARMC6Q6NXE6 501 aa8.3□□□□□ -1.08
SF3B2-216ENST00000534765 TMEM107Q6UX40 140 aa8.3□□□□□ -1.08
SF3B2-216ENST00000534765 ZNF546Q86UE3 836 aa8.3□□□□□ -1.08
SF3B2-216ENST00000534765 OR5M1Q8NGP8 315 aa8.3□□□□□ -1.08
SF3B2-216ENST00000534765 OR56B4Q8NH76 319 aa8.3□□□□□ -1.08
SF3B2-216ENST00000534765 KIAA1143Q96AT1 154 aaPredicted RBP8.3□□□□□ -1.08
SF3B2-216ENST00000534765 OPN3Q9H1Y3 402 aaPredicted RBP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms