RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, human

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-223	ENST00000534442	OMA1	Q96E52	524 aa		3.69	□□□□□ -1.82
ECHDC1-223	ENST00000534442	PCDHB18P	Q96TA0	734 aa		3.69	□□□□□ -1.82
ECHDC1-223	ENST00000534442	DDX47	Q9H0S4	455 aa	Known RBP	3.69	□□□□□ -1.82
ECHDC1-223	ENST00000534442	DEFB127	Q9H1M4	99 aa		3.69	□□□□□ -1.82
ECHDC1-223	ENST00000534442	DCLRE1B	Q9H816	532 aa		3.69	□□□□□ -1.82
ECHDC1-223	ENST00000534442	MRM3	Q9HC36	420 aa	Known RBP	3.69	□□□□□ -1.82
ECHDC1-223	ENST00000534442	FAM212B	Q9NTI7	297 aa	Predicted RBP	3.69	□□□□□ -1.82
ECHDC1-223	ENST00000534442	SOHLH2	Q9NX45	425 aa		3.69	□□□□□ -1.82
ECHDC1-223	ENST00000534442	NDUFA13	Q9P0J0	144 aa		3.69	□□□□□ -1.82
ECHDC1-223	ENST00000534442	WDR37	Q9Y2I8	494 aa		3.69	□□□□□ -1.82
ECHDC1-223	ENST00000534442	ARHGAP21	Q5T5U3	1957 aa		3.69	□□□□□ -1.82
ECHDC1-223	ENST00000534442	NSG1	A0A0A6YYJ2	146 aa		3.68	□□□□□ -1.82
ECHDC1-223	ENST00000534442		A0A0D9SEW6	157 aa		3.68	□□□□□ -1.82
ECHDC1-223	ENST00000534442	CXorf51A	A0A1B0GTR3	108 aa		3.68	□□□□□ -1.82
ECHDC1-223	ENST00000534442	NKX6-3	A6NJ46	265 aa		3.68	□□□□□ -1.82
ECHDC1-223	ENST00000534442	IFITM10	A6NMD0	228 aa		3.68	□□□□□ -1.82
ECHDC1-223	ENST00000534442	KRTAP29-1	A8MX34	341 aa	Predicted RBP	3.68	□□□□□ -1.82
ECHDC1-223	ENST00000534442	XPO1	O14980	1071 aa	Known RBP	3.68	□□□□□ -1.82
ECHDC1-223	ENST00000534442	ATP6V1G1	O75348	118 aa		3.68	□□□□□ -1.82
ECHDC1-223	ENST00000534442	ZMPSTE24	O75844	475 aa		3.68	□□□□□ -1.82
ECHDC1-223	ENST00000534442	PTBP3	O95758	552 aa	Known RBP	3.68	□□□□□ -1.82
ECHDC1-223	ENST00000534442	AMBP	P02760	352 aa		3.68	□□□□□ -1.82
ECHDC1-223	ENST00000534442	XRCC1	P18887	633 aa	Predicted RBP	3.68	□□□□□ -1.82
ECHDC1-223	ENST00000534442	PRTN3	P24158	256 aa		3.68	□□□□□ -1.82
ECHDC1-223	ENST00000534442	NSG1	P42857	185 aa		3.68	□□□□□ -1.82
ECHDC1-223	ENST00000534442	NSF	P46459	744 aa	Known RBP	3.68	□□□□□ -1.82
ECHDC1-223	ENST00000534442	CAMLG	P49069	296 aa		3.68	□□□□□ -1.82
ECHDC1-223	ENST00000534442	CCR4	P51679	360 aa		3.68	□□□□□ -1.82
ECHDC1-223	ENST00000534442	PAX9	P55771	341 aa		3.68	□□□□□ -1.82
ECHDC1-223	ENST00000534442	GNB1	P62873	340 aa		3.68	□□□□□ -1.82
ECHDC1-223	ENST00000534442	HERV-K104	P63124	156 aa		3.68	□□□□□ -1.82
ECHDC1-223	ENST00000534442	MFGE8	Q08431	387 aa	Predicted RBP	3.68	□□□□□ -1.82
ECHDC1-223	ENST00000534442	FASTK	Q14296	549 aa	Known RBP	3.68	□□□□□ -1.82
ECHDC1-223	ENST00000534442	KRT31	Q15323	416 aa		3.68	□□□□□ -1.82
ECHDC1-223	ENST00000534442	SNRNP35	Q16560	246 aa	Known RBP	3.68	□□□□□ -1.82
ECHDC1-223	ENST00000534442	NRF1	Q16656	503 aa		3.68	□□□□□ -1.82
ECHDC1-223	ENST00000534442	NKAIN1	Q4KMZ8	207 aa		3.68	□□□□□ -1.82
ECHDC1-223	ENST00000534442	LCE1A	Q5T7P2	110 aa		3.68	□□□□□ -1.82
ECHDC1-223	ENST00000534442	SLC25A25	Q6KCM7	469 aa		3.68	□□□□□ -1.82
ECHDC1-223	ENST00000534442	DOK6	Q6PKX4	331 aa		3.68	□□□□□ -1.82
ECHDC1-223	ENST00000534442	C18orf65	Q6ZTR6	163 aa		3.68	□□□□□ -1.82
ECHDC1-223	ENST00000534442	LUZP2	Q86TE4	346 aa		3.68	□□□□□ -1.82
ECHDC1-223	ENST00000534442	HOGA1	Q86XE5	327 aa		3.68	□□□□□ -1.82
ECHDC1-223	ENST00000534442	OR4L1	Q8NH43	312 aa		3.68	□□□□□ -1.82
ECHDC1-223	ENST00000534442	GLYATL1	Q969I3	302 aa		3.68	□□□□□ -1.82
ECHDC1-223	ENST00000534442	SAMD8	Q96LT4	415 aa		3.68	□□□□□ -1.82
ECHDC1-223	ENST00000534442	F2RL3	Q96RI0	385 aa		3.68	□□□□□ -1.82
ECHDC1-223	ENST00000534442	ERGIC2	Q96RQ1	377 aa		3.68	□□□□□ -1.82
ECHDC1-223	ENST00000534442	PLIN2	Q99541	437 aa		3.68	□□□□□ -1.82
ECHDC1-223	ENST00000534442	UTP23	Q9BRU9	249 aa	Known RBP	3.68	□□□□□ -1.82
ECHDC1-223	ENST00000534442	MED18	Q9BUE0	208 aa		3.68	□□□□□ -1.82
ECHDC1-223	ENST00000534442	ACOXL	Q9NUZ1	547 aa		3.68	□□□□□ -1.82
ECHDC1-223	ENST00000534442	ACTR3B	Q9P1U1	418 aa		3.68	□□□□□ -1.82
ECHDC1-223	ENST00000534442	TMEM181	Q9P2C4	612 aa		3.68	□□□□□ -1.82
ECHDC1-223	ENST00000534442	ZNF319	Q9P2F9	582 aa		3.68	□□□□□ -1.82
ECHDC1-223	ENST00000534442	FAM153A	Q9UHL3	310 aa		3.68	□□□□□ -1.82
ECHDC1-223	ENST00000534442	TEKT2	Q9UIF3	430 aa		3.68	□□□□□ -1.82
ECHDC1-223	ENST00000534442	HOOK1	Q9UJC3	728 aa	Known RBP	3.68	□□□□□ -1.82
ECHDC1-223	ENST00000534442	ZNF580	Q9UK33	172 aa		3.68	□□□□□ -1.82
ECHDC1-223	ENST00000534442	PYGO1	Q9Y3Y4	419 aa		3.68	□□□□□ -1.82
ECHDC1-223	ENST00000534442	SELENOK	Q9Y6D0	94 aa		3.68	□□□□□ -1.82
ECHDC1-223	ENST00000534442	CLCA3P	Q9Y6N3	262 aa		3.68	□□□□□ -1.82
ECHDC1-223	ENST00000534442		A0A0U1RRA0	63 aa		3.67	□□□□□ -1.82
ECHDC1-223	ENST00000534442	ARHGAP42	A6NI28	874 aa		3.67	□□□□□ -1.82
ECHDC1-223	ENST00000534442	C15orf61	A6NNL5	157 aa		3.67	□□□□□ -1.82
ECHDC1-223	ENST00000534442		E7EQ34	232 aa		3.67	□□□□□ -1.82
ECHDC1-223	ENST00000534442	FAM72C	H0Y354	149 aa		3.67	□□□□□ -1.82
ECHDC1-223	ENST00000534442	SLC1A7	O00341	560 aa		3.67	□□□□□ -1.82
ECHDC1-223	ENST00000534442	NME2P1	O60361	137 aa		3.67	□□□□□ -1.82
ECHDC1-223	ENST00000534442	ZNF432	O94892	652 aa		3.67	□□□□□ -1.82
ECHDC1-223	ENST00000534442	TXNDC12	O95881	172 aa		3.67	□□□□□ -1.82
ECHDC1-223	ENST00000534442	MT-ATP6	P00846	226 aa		3.67	□□□□□ -1.82
ECHDC1-223	ENST00000534442	CALCA	P01258	141 aa		3.67	□□□□□ -1.82
ECHDC1-223	ENST00000534442	SLC2A3	P11169	496 aa		3.67	□□□□□ -1.82
ECHDC1-223	ENST00000534442	PCMT1	P22061	227 aa		3.67	□□□□□ -1.82
ECHDC1-223	ENST00000534442	TEAD1	P28347	426 aa		3.67	□□□□□ -1.82
ECHDC1-223	ENST00000534442	FEN1	P39748	380 aa	Known RBP	3.67	□□□□□ -1.82
ECHDC1-223	ENST00000534442	GUCY2D	Q02846	1103 aa		3.67	□□□□□ -1.82
ECHDC1-223	ENST00000534442	CYP24A1	Q07973	514 aa		3.67	□□□□□ -1.82
ECHDC1-223	ENST00000534442	HEPACAM	Q14CZ8	416 aa		3.67	□□□□□ -1.82
ECHDC1-223	ENST00000534442	FAM72A	Q5TYM5	149 aa		3.67	□□□□□ -1.82
ECHDC1-223	ENST00000534442	FAM72D	Q6L9T8	149 aa		3.67	□□□□□ -1.82
ECHDC1-223	ENST00000534442	CAPN13	Q6MZZ7	669 aa	Predicted RBP	3.67	□□□□□ -1.82
ECHDC1-223	ENST00000534442	SYT10	Q6XYQ8	523 aa		3.67	□□□□□ -1.82
ECHDC1-223	ENST00000534442		Q6ZSR9	355 aa		3.67	□□□□□ -1.82
ECHDC1-223	ENST00000534442		Q6ZVQ6	151 aa		3.67	□□□□□ -1.82
ECHDC1-223	ENST00000534442	RFPL4B	Q6ZWI9	263 aa		3.67	□□□□□ -1.82
ECHDC1-223	ENST00000534442	TAC4	Q86UU9	113 aa		3.67	□□□□□ -1.82
ECHDC1-223	ENST00000534442	NLRP14	Q86W24	1093 aa		3.67	□□□□□ -1.82
ECHDC1-223	ENST00000534442	NR2C2AP	Q86WQ0	139 aa		3.67	□□□□□ -1.82
ECHDC1-223	ENST00000534442	FAM72B	Q86X60	149 aa		3.67	□□□□□ -1.82
ECHDC1-223	ENST00000534442	KDM8	Q8N371	416 aa		3.67	□□□□□ -1.82
ECHDC1-223	ENST00000534442	BPIFB2	Q8N4F0	458 aa		3.67	□□□□□ -1.82
ECHDC1-223	ENST00000534442	RPP25L	Q8N5L8	163 aa	Known RBP	3.67	□□□□□ -1.82
ECHDC1-223	ENST00000534442	C4orf32	Q8N8J7	132 aa		3.67	□□□□□ -1.82
ECHDC1-223	ENST00000534442	ZPLD1	Q8TCW7	415 aa		3.67	□□□□□ -1.82
ECHDC1-223	ENST00000534442	HCAR2	Q8TDS4	363 aa		3.67	□□□□□ -1.82
ECHDC1-223	ENST00000534442	NTNG2	Q96CW9	530 aa		3.67	□□□□□ -1.82
ECHDC1-223	ENST00000534442	C16orf58	Q96GQ5	468 aa		3.67	□□□□□ -1.82
ECHDC1-223	ENST00000534442	NSMCE2	Q96MF7	247 aa		3.67	□□□□□ -1.82

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