RNA–Protein interactions for RNA: ENST00000534356.1

CASP4-213, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 771 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-213ENST00000534356 SETD7Q8WTS6 366 aaKnown RBP4.56□□□□□ -1.68
CASP4-213ENST00000534356 ELMO2Q96JJ3 720 aa4.56□□□□□ -1.68
CASP4-213ENST00000534356 PKMYT1Q99640 499 aa4.56□□□□□ -1.68
CASP4-213ENST00000534356 KIR2DL4Q99706 377 aa4.56□□□□□ -1.68
CASP4-213ENST00000534356 C1orf21Q9H246 121 aa4.56□□□□□ -1.68
CASP4-213ENST00000534356 GPN2Q9H9Y4 310 aaPredicted RBP4.56□□□□□ -1.68
CASP4-213ENST00000534356 NGBQ9NPG2 151 aa4.56□□□□□ -1.68
CASP4-213ENST00000534356 C1orf123Q9NWV4 160 aa4.56□□□□□ -1.68
CASP4-213ENST00000534356 EHFQ9NZC4 300 aa4.56□□□□□ -1.68
CASP4-213ENST00000534356 IL17CQ9P0M4 197 aa4.56□□□□□ -1.68
CASP4-213ENST00000534356 KLHL21Q9UJP4 597 aa4.56□□□□□ -1.68
CASP4-213ENST00000534356 ASB3Q9Y575 518 aa4.56□□□□□ -1.68
CASP4-213ENST00000534356 PTPN13Q12923 2485 aa4.56□□□□□ -1.68
CASP4-213ENST00000534356 TDRD6O60522 2096 aaKnown RBP4.55□□□□□ -1.68
CASP4-213ENST00000534356 PHLPP2Q6ZVD8 1323 aa4.55□□□□□ -1.68
CASP4-213ENST00000534356 CLDN3O15551 220 aa4.55□□□□□ -1.68
CASP4-213ENST00000534356 PRPSAP2O60256 369 aa4.55□□□□□ -1.68
CASP4-213ENST00000534356 TOM1L1O75674 476 aa4.55□□□□□ -1.68
CASP4-213ENST00000534356 CLTAP09496 248 aa4.55□□□□□ -1.68
CASP4-213ENST00000534356 ASMTP46597 345 aa4.55□□□□□ -1.68
CASP4-213ENST00000534356 TUFMP49411 452 aaKnown RBP4.55□□□□□ -1.68
CASP4-213ENST00000534356 EMDP50402 254 aa4.55□□□□□ -1.68
CASP4-213ENST00000534356 ISXQ2M1V0 245 aa4.55□□□□□ -1.68
CASP4-213ENST00000534356 ADPRMQ3LIE5 342 aa4.55□□□□□ -1.68
CASP4-213ENST00000534356 TMEM52BQ4KMG9 183 aa4.55□□□□□ -1.68
CASP4-213ENST00000534356 ZNF658Q5TYW1 1059 aaPredicted RBP4.55□□□□□ -1.68
CASP4-213ENST00000534356 STAC2Q6ZMT1 411 aa4.55□□□□□ -1.68
CASP4-213ENST00000534356 TMEM25Q86YD3 366 aa4.55□□□□□ -1.68
CASP4-213ENST00000534356 PDCL2Q8N4E4 241 aa4.55□□□□□ -1.68
CASP4-213ENST00000534356 MRPS31Q92665 395 aaKnown RBP4.55□□□□□ -1.68
CASP4-213ENST00000534356 KIFAP3Q92845 792 aa4.55□□□□□ -1.68
CASP4-213ENST00000534356 APOBEC3BQ9UH17 382 aaKnown RBP4.55□□□□□ -1.68
CASP4-213ENST00000534356 UBQLN1Q9UMX0 589 aaKnown RBP4.55□□□□□ -1.68
CASP4-213ENST00000534356 FOXJ3Q9UPW0 622 aa4.55□□□□□ -1.68
CASP4-213ENST00000534356 ZNF256Q9Y2P7 627 aaPredicted RBP4.55□□□□□ -1.68
CASP4-213ENST00000534356 CLCA3PQ9Y6N3 262 aa4.55□□□□□ -1.68
CASP4-213ENST00000534356 AHCTF1Q8WYP5 2266 aa4.55□□□□□ -1.68
CASP4-213ENST00000534356 COL5A1P20908 1838 aaPredicted RBP4.54□□□□□ -1.68
CASP4-213ENST00000534356 TRAV19A0A0A6YYK7 116 aa4.54□□□□□ -1.68
CASP4-213ENST00000534356 FAM230AA0A1W2PPH8 454 aa4.54□□□□□ -1.68
CASP4-213ENST00000534356 GOLGA8IPA6NC78 632 aa4.54□□□□□ -1.68
CASP4-213ENST00000534356 ZSCAN5BA6NJL1 495 aa4.54□□□□□ -1.68
CASP4-213ENST00000534356 GOLGA8JA6NMD2 632 aa4.54□□□□□ -1.68
CASP4-213ENST00000534356 MAPK3P27361 379 aaPredicted RBP4.54□□□□□ -1.68
CASP4-213ENST00000534356 PSMA5P28066 241 aa4.54□□□□□ -1.68
CASP4-213ENST00000534356 RPL4P36578 427 aaKnown RBP4.54□□□□□ -1.68
CASP4-213ENST00000534356 CAMLGP49069 296 aa4.54□□□□□ -1.68
CASP4-213ENST00000534356 CSNK1EP49674 416 aaKnown RBP4.54□□□□□ -1.68
CASP4-213ENST00000534356 LCE3EQ5T5B0 92 aa4.54□□□□□ -1.68
CASP4-213ENST00000534356 BPIFB2Q8N4F0 458 aa4.54□□□□□ -1.68
CASP4-213ENST00000534356 ANKRD20A12PQ8NF67 263 aa4.54□□□□□ -1.68
CASP4-213ENST00000534356 OR52B4Q8NGK2 314 aa4.54□□□□□ -1.68
CASP4-213ENST00000534356 KCNK16Q96T55 309 aa4.54□□□□□ -1.68
CASP4-213ENST00000534356 PRORYQ9H606 182 aa4.54□□□□□ -1.68
CASP4-213ENST00000534356 ODF2LQ9ULJ1 636 aa4.54□□□□□ -1.68
CASP4-213ENST00000534356 CA5BQ9Y2D0 317 aa4.54□□□□□ -1.68
CASP4-213ENST00000534356 L3MBTL1Q9Y468 752 aa4.54□□□□□ -1.68
CASP4-213ENST00000534356 USP9XQ93008 2570 aaPredicted RBP4.54□□□□□ -1.68
CASP4-213ENST00000534356 PTPRJQ12913 1337 aa4.53□□□□□ -1.68
CASP4-213ENST00000534356 NBASA2RRP1 2371 aa4.53□□□□□ -1.68
CASP4-213ENST00000534356 ANKRD30BLA7E2S9 258 aa4.53□□□□□ -1.68
CASP4-213ENST00000534356 WASHC1A8K0Z3 465 aa4.53□□□□□ -1.68
CASP4-213ENST00000534356 CLDN5O00501 218 aa4.53□□□□□ -1.68
CASP4-213ENST00000534356 TRIM16O95361 564 aa4.53□□□□□ -1.68
CASP4-213ENST00000534356 APODP05090 189 aa4.53□□□□□ -1.68
CASP4-213ENST00000534356 XRCC1P18887 633 aaPredicted RBP4.53□□□□□ -1.68
CASP4-213ENST00000534356 ADSSP30520 456 aa4.53□□□□□ -1.68
CASP4-213ENST00000534356 RGRP47804 291 aa4.53□□□□□ -1.68
CASP4-213ENST00000534356 SEMG2Q02383 582 aa4.53□□□□□ -1.68
CASP4-213ENST00000534356 DPYSL3Q14195 570 aa4.53□□□□□ -1.68
CASP4-213ENST00000534356 ZNF79Q15937 498 aa4.53□□□□□ -1.68
CASP4-213ENST00000534356 PAGE2BQ5JRK9 111 aa4.53□□□□□ -1.68
CASP4-213ENST00000534356 CYS1Q717R9 158 aa4.53□□□□□ -1.68
CASP4-213ENST00000534356 VASH2Q86V25 355 aa4.53□□□□□ -1.68
CASP4-213ENST00000534356 BBS7Q8IWZ6 715 aa4.53□□□□□ -1.68
CASP4-213ENST00000534356 SPPL2BQ8TCT7 592 aa4.53□□□□□ -1.68
CASP4-213ENST00000534356 UPRTQ96BW1 309 aa4.53□□□□□ -1.68
CASP4-213ENST00000534356 TMEM121Q9BTD3 319 aa4.53□□□□□ -1.68
CASP4-213ENST00000534356 C19orf24Q9BVV8 132 aa4.53□□□□□ -1.68
CASP4-213ENST00000534356 COMMD4Q9H0A8 199 aa4.53□□□□□ -1.68
CASP4-213ENST00000534356 LPAR2Q9HBW0 351 aa4.53□□□□□ -1.68
CASP4-213ENST00000534356 UTP6Q9NYH9 597 aaKnown RBP4.53□□□□□ -1.68
CASP4-213ENST00000534356 HOOK1Q9UJC3 728 aaKnown RBP4.53□□□□□ -1.68
CASP4-213ENST00000534356 CELA1Q9UNI1 258 aa4.53□□□□□ -1.68
CASP4-213ENST00000534356 EIF3LQ9Y262 564 aaKnown RBP4.53□□□□□ -1.68
CASP4-213ENST00000534356 FLVCR1Q9Y5Y0 555 aa4.53□□□□□ -1.68
CASP4-213ENST00000534356 PLXNA2O75051 1894 aa4.53□□□□□ -1.68
CASP4-213ENST00000534356 UTP20O75691 2785 aaKnown RBP4.52□□□□□ -1.69
CASP4-213ENST00000534356 ZFP92A6NM28 416 aa4.52□□□□□ -1.69
CASP4-213ENST00000534356 LRRC30A6NM36 301 aa4.52□□□□□ -1.69
CASP4-213ENST00000534356 CASC3O15234 703 aaKnown RBP4.52□□□□□ -1.69
CASP4-213ENST00000534356 COCHO43405 550 aa4.52□□□□□ -1.69
CASP4-213ENST00000534356 CISD3P0C7P0 127 aa4.52□□□□□ -1.69
CASP4-213ENST00000534356 CYLC1P35663 651 aaPredicted RBP4.52□□□□□ -1.69
CASP4-213ENST00000534356 P2RY4P51582 365 aa4.52□□□□□ -1.69
CASP4-213ENST00000534356 GMFBP60983 142 aa4.52□□□□□ -1.69
CASP4-213ENST00000534356 TFAMQ00059 246 aaKnown RBP4.52□□□□□ -1.69
CASP4-213ENST00000534356 CCDC173Q0VFZ6 552 aa4.52□□□□□ -1.69
CASP4-213ENST00000534356 DNAJC3Q13217 504 aa4.52□□□□□ -1.69
CASP4-213ENST00000534356 KCNJ11Q14654 390 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms