RNA–Protein interactions for RNA: ENST00000534149.5

CTSB-230, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-230ENST00000534149 SMU1Q2TAY7 513 aa12.87□□□□□ -0.35
CTSB-230ENST00000534149 C1orf140Q5VVS0 124 aa12.87□□□□□ -0.35
CTSB-230ENST00000534149 PEG10Q86TG7 708 aaKnown RBP12.87□□□□□ -0.35
CTSB-230ENST00000534149 ZNF440Q8IYI8 595 aa12.87□□□□□ -0.35
CTSB-230ENST00000534149 TCP10LQ8TDR4 215 aa12.87□□□□□ -0.35
CTSB-230ENST00000534149 ZNF837Q96EG3 531 aaPredicted RBP12.87□□□□□ -0.35
CTSB-230ENST00000534149 LRRC37BQ96QE4 947 aa12.87□□□□□ -0.35
CTSB-230ENST00000534149 MRPL37Q9BZE1 423 aaKnown RBP12.87□□□□□ -0.35
CTSB-230ENST00000534149 AKTIPQ9H8T0 292 aa12.87□□□□□ -0.35
CTSB-230ENST00000534149 MTHFD2LQ9H903 347 aaPredicted RBP12.87□□□□□ -0.35
CTSB-230ENST00000534149 PCDHB10Q9UN67 800 aa12.87□□□□□ -0.35
CTSB-230ENST00000534149 GRIP1Q9Y3R0 1128 aa12.87□□□□□ -0.35
CTSB-230ENST00000534149 CMAHPQ9Y471 501 aa12.87□□□□□ -0.35
CTSB-230ENST00000534149 TLDC2A0PJX2 215 aa12.86□□□□□ -0.35
CTSB-230ENST00000534149 RPL36A-HNRNPH2H7BZ11 118 aa12.86□□□□□ -0.35
CTSB-230ENST00000534149 M0R233 179 aa12.86□□□□□ -0.35
CTSB-230ENST00000534149 WNT9BO14905 357 aa12.86□□□□□ -0.35
CTSB-230ENST00000534149 SYNGR3O43761 229 aa12.86□□□□□ -0.35
CTSB-230ENST00000534149 HPXP02790 462 aa12.86□□□□□ -0.35
CTSB-230ENST00000534149 NR2F1P10589 423 aa12.86□□□□□ -0.35
CTSB-230ENST00000534149 TCN1P20061 433 aaPredicted RBP12.86□□□□□ -0.35
CTSB-230ENST00000534149 ARR3P36575 388 aa12.86□□□□□ -0.35
CTSB-230ENST00000534149 ACAA2P42765 397 aaKnown RBP12.86□□□□□ -0.35
CTSB-230ENST00000534149 CAPZA2P47755 286 aa12.86□□□□□ -0.35
CTSB-230ENST00000534149 HILS1P60008 231 aa12.86□□□□□ -0.35
CTSB-230ENST00000534149 SCGB2A2Q13296 93 aa12.86□□□□□ -0.35
CTSB-230ENST00000534149 CEACAM16Q2WEN9 425 aa12.86□□□□□ -0.35
CTSB-230ENST00000534149 WBP2NLQ6ICG8 309 aa12.86□□□□□ -0.35
CTSB-230ENST00000534149 ZNF836Q6ZNA1 936 aa12.86□□□□□ -0.35
CTSB-230ENST00000534149 VRK2Q86Y07 508 aa12.86□□□□□ -0.35
CTSB-230ENST00000534149 PNPT1Q8TCS8 783 aaKnown RBP12.86□□□□□ -0.35
CTSB-230ENST00000534149 FAM216AQ8WUB2 273 aa12.86□□□□□ -0.35
CTSB-230ENST00000534149 TESCQ96BS2 214 aa12.86□□□□□ -0.35
CTSB-230ENST00000534149 GPR35Q9HC97 309 aa12.86□□□□□ -0.35
CTSB-230ENST00000534149 TREM2Q9NZC2 230 aa12.86□□□□□ -0.35
CTSB-230ENST00000534149 REV1Q9UBZ9 1251 aa12.86□□□□□ -0.35
CTSB-230ENST00000534149 SEC14L4Q9UDX3 406 aa12.86□□□□□ -0.35
CTSB-230ENST00000534149 PKD1L1Q8TDX9 2849 aa12.86□□□□□ -0.35
CTSB-230ENST00000534149 WNK2Q9Y3S1 2297 aa12.85□□□□□ -0.35
CTSB-230ENST00000534149 CDHR4A6H8M9 788 aa12.85□□□□□ -0.35
CTSB-230ENST00000534149 TRIM77I1YAP6 450 aa12.85□□□□□ -0.35
CTSB-230ENST00000534149 NPIPB7O75200 414 aa12.85□□□□□ -0.35
CTSB-230ENST00000534149 SLC43A1O75387 559 aa12.85□□□□□ -0.35
CTSB-230ENST00000534149 ZNF432O94892 652 aa12.85□□□□□ -0.35
CTSB-230ENST00000534149 TFPTP0C1Z6 253 aa12.85□□□□□ -0.35
CTSB-230ENST00000534149 GAAP10253 952 aa12.85□□□□□ -0.35
CTSB-230ENST00000534149 PNMTP11086 282 aa12.85□□□□□ -0.35
CTSB-230ENST00000534149 PRG2P13727 222 aa12.85□□□□□ -0.35
CTSB-230ENST00000534149 ZNF43P17038 809 aa12.85□□□□□ -0.35
CTSB-230ENST00000534149 EPHA1P21709 976 aa12.85□□□□□ -0.35
CTSB-230ENST00000534149 NR4A1P22736 598 aa12.85□□□□□ -0.35
CTSB-230ENST00000534149 COL8A2P25067 703 aa12.85□□□□□ -0.35
CTSB-230ENST00000534149 ALDH3B1P43353 468 aa12.85□□□□□ -0.35
CTSB-230ENST00000534149 COPZ1P61923 177 aa12.85□□□□□ -0.35
CTSB-230ENST00000534149 POU3F1Q03052 451 aaPredicted RBP12.85□□□□□ -0.35
CTSB-230ENST00000534149 COX20Q5RI15 118 aa12.85□□□□□ -0.35
CTSB-230ENST00000534149 ATG16L1Q676U5 607 aa12.85□□□□□ -0.35
CTSB-230ENST00000534149 FAHD2BQ6P2I3 314 aaPredicted RBP12.85□□□□□ -0.35
CTSB-230ENST00000534149 PEX5LQ8IYB4 626 aa12.85□□□□□ -0.35
CTSB-230ENST00000534149 GPR137CQ8N3F9 429 aa12.85□□□□□ -0.35
CTSB-230ENST00000534149 OR51F2Q8NH61 342 aa12.85□□□□□ -0.35
CTSB-230ENST00000534149 MRPL24Q96A35 216 aaKnown RBP12.85□□□□□ -0.35
CTSB-230ENST00000534149 SLC25A36Q96CQ1 311 aa12.85□□□□□ -0.35
CTSB-230ENST00000534149 FAHD2AQ96GK7 314 aa12.85□□□□□ -0.35
CTSB-230ENST00000534149 MS4A3Q96HJ5 214 aa12.85□□□□□ -0.35
CTSB-230ENST00000534149 CCDC115Q96NT0 180 aa12.85□□□□□ -0.35
CTSB-230ENST00000534149 SYT3Q9BQG1 590 aa12.85□□□□□ -0.35
CTSB-230ENST00000534149 RACGAP1Q9H0H5 632 aa12.85□□□□□ -0.35
CTSB-230ENST00000534149 USP22Q9UPT9 525 aa12.85□□□□□ -0.35
CTSB-230ENST00000534149 RCE1Q9Y256 329 aa12.85□□□□□ -0.35
CTSB-230ENST00000534149 TRRAPQ9Y4A5 3859 aa12.84□□□□□ -0.35
CTSB-230ENST00000534149 CCDC154A6NI56 674 aa12.84□□□□□ -0.35
CTSB-230ENST00000534149 FTCDNL1E5RQL4 147 aa12.84□□□□□ -0.35
CTSB-230ENST00000534149 E9PBE3 544 aa12.84□□□□□ -0.35
CTSB-230ENST00000534149 ITM2AO43736 263 aa12.84□□□□□ -0.35
CTSB-230ENST00000534149 AHSA1O95433 338 aa12.84□□□□□ -0.35
CTSB-230ENST00000534149 TFP02787 698 aa12.84□□□□□ -0.35
CTSB-230ENST00000534149 BPGMP07738 259 aa12.84□□□□□ -0.35
CTSB-230ENST00000534149 NUDT17P0C025 328 aa12.84□□□□□ -0.35
CTSB-230ENST00000534149 NCF2P19878 526 aaPredicted RBP12.84□□□□□ -0.35
CTSB-230ENST00000534149 ACHEP22303 614 aa12.84□□□□□ -0.35
CTSB-230ENST00000534149 S100A3P33764 101 aa12.84□□□□□ -0.35
CTSB-230ENST00000534149 CDKN2CP42773 168 aa12.84□□□□□ -0.35
CTSB-230ENST00000534149 ANXA11P50995 505 aaKnown RBP12.84□□□□□ -0.35
CTSB-230ENST00000534149 SEC24CP53992 1094 aa12.84□□□□□ -0.35
CTSB-230ENST00000534149 CLNS1AP54105 237 aaKnown RBP12.84□□□□□ -0.35
CTSB-230ENST00000534149 MAD2L1BPQ15013 274 aaPredicted RBP12.84□□□□□ -0.35
CTSB-230ENST00000534149 MAPK11Q15759 364 aa12.84□□□□□ -0.35
CTSB-230ENST00000534149 DPY19L1Q2PZI1 675 aa12.84□□□□□ -0.35
CTSB-230ENST00000534149 SLC9B1Q4ZJI4 515 aa12.84□□□□□ -0.35
CTSB-230ENST00000534149 LIN52Q52LA3 116 aa12.84□□□□□ -0.35
CTSB-230ENST00000534149 C1orf229Q6ZS94 237 aaPredicted RBP12.84□□□□□ -0.35
CTSB-230ENST00000534149 ZNF781Q8N8C0 355 aa12.84□□□□□ -0.35
CTSB-230ENST00000534149 ANKK1Q8NFD2 765 aa12.84□□□□□ -0.35
CTSB-230ENST00000534149 IL17RDQ8NFM7 739 aa12.84□□□□□ -0.35
CTSB-230ENST00000534149 OR52P1PQ8NH57 321 aa12.84□□□□□ -0.35
CTSB-230ENST00000534149 KIF18AQ8NI77 898 aa12.84□□□□□ -0.35
CTSB-230ENST00000534149 RDH5Q92781 318 aa12.84□□□□□ -0.35
CTSB-230ENST00000534149 YIPF5Q969M3 257 aa12.84□□□□□ -0.35
CTSB-230ENST00000534149 ZIM3Q96PE6 472 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms