RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 UBLCP1Q8WVY7 318 aaPredicted RBP2.53□□□□□ -2
CHMP4A-208ENST00000534106 EXT2Q93063 718 aa2.53□□□□□ -2
CHMP4A-208ENST00000534106 TM4SF18Q96CE8 201 aa2.53□□□□□ -2
CHMP4A-208ENST00000534106 KTI12Q96EK9 354 aaPredicted RBP2.53□□□□□ -2
CHMP4A-208ENST00000534106 DAZAP1Q96EP5 407 aaKnown RBP2.53□□□□□ -2
CHMP4A-208ENST00000534106 WDR34Q96EX3 536 aa2.53□□□□□ -2
CHMP4A-208ENST00000534106 SH3YL1Q96HL8 342 aaPredicted RBP2.53□□□□□ -2
CHMP4A-208ENST00000534106 VSTM2LQ96N03 204 aa2.53□□□□□ -2
CHMP4A-208ENST00000534106 ZNF681Q96N22 645 aa2.53□□□□□ -2
CHMP4A-208ENST00000534106 MUS81Q96NY9 551 aa2.53□□□□□ -2
CHMP4A-208ENST00000534106 CITED1Q99966 193 aa2.53□□□□□ -2
CHMP4A-208ENST00000534106 PSD2Q9BQI7 771 aa2.53□□□□□ -2
CHMP4A-208ENST00000534106 PELOQ9BRX2 385 aaKnown RBP2.53□□□□□ -2
CHMP4A-208ENST00000534106 CAPS2Q9BXY5 557 aa2.53□□□□□ -2
CHMP4A-208ENST00000534106 FUT8Q9BYC5 575 aa2.53□□□□□ -2
CHMP4A-208ENST00000534106 MS4A7Q9GZW8 240 aaPredicted RBP2.53□□□□□ -2
CHMP4A-208ENST00000534106 RACGAP1Q9H0H5 632 aa2.53□□□□□ -2
CHMP4A-208ENST00000534106 RAB1BQ9H0U4 201 aa2.53□□□□□ -2
CHMP4A-208ENST00000534106 PLK3Q9H4B4 646 aa2.53□□□□□ -2
CHMP4A-208ENST00000534106 DDX31Q9H8H2 851 aaKnown RBP2.53□□□□□ -2
CHMP4A-208ENST00000534106 MED4Q9NPJ6 270 aa2.53□□□□□ -2
CHMP4A-208ENST00000534106 MMP26Q9NRE1 261 aa2.53□□□□□ -2
CHMP4A-208ENST00000534106 GLRX2Q9NS18 164 aa2.53□□□□□ -2
CHMP4A-208ENST00000534106 MED17Q9NVC6 651 aa2.53□□□□□ -2
CHMP4A-208ENST00000534106 MS4A12Q9NXJ0 267 aa2.53□□□□□ -2
CHMP4A-208ENST00000534106 PAK5Q9P286 719 aa2.53□□□□□ -2
CHMP4A-208ENST00000534106 KLHL13Q9P2N7 655 aa2.53□□□□□ -2
CHMP4A-208ENST00000534106 CTNNAL1Q9UBT7 734 aa2.53□□□□□ -2
CHMP4A-208ENST00000534106 PHF11Q9UIL8 331 aa2.53□□□□□ -2
CHMP4A-208ENST00000534106 MGAT4BQ9UQ53 548 aa2.53□□□□□ -2
CHMP4A-208ENST00000534106 OR10H1Q9Y4A9 318 aa2.53□□□□□ -2
CHMP4A-208ENST00000534106 OARD1Q9Y530 152 aa2.53□□□□□ -2
CHMP4A-208ENST00000534106 PSAT1Q9Y617 370 aa2.53□□□□□ -2
CHMP4A-208ENST00000534106 SAR1BQ9Y6B6 198 aa2.53□□□□□ -2
CHMP4A-208ENST00000534106 HUWE1Q7Z6Z7 4374 aaKnown RBP2.52□□□□□ -2.01
CHMP4A-208ENST00000534106 FRAS1Q86XX4 4008 aa2.52□□□□□ -2.01
CHMP4A-208ENST00000534106 A0A087WV62 115 aa2.52□□□□□ -2.01
CHMP4A-208ENST00000534106 IGHV1-18A0A0C4DH31 117 aa2.52□□□□□ -2.01
CHMP4A-208ENST00000534106 MAGEB16A2A368 324 aa2.52□□□□□ -2.01
CHMP4A-208ENST00000534106 B9A039 149 aa2.52□□□□□ -2.01
CHMP4A-208ENST00000534106 hCG_2039718K7EN88 272 aa2.52□□□□□ -2.01
CHMP4A-208ENST00000534106 M0QZ24 198 aa2.52□□□□□ -2.01
CHMP4A-208ENST00000534106 EBAG9O00559 213 aa2.52□□□□□ -2.01
CHMP4A-208ENST00000534106 NDUFAB1O14561 156 aa2.52□□□□□ -2.01
CHMP4A-208ENST00000534106 ZNF195O14628 629 aa2.52□□□□□ -2.01
CHMP4A-208ENST00000534106 SCAMP2O15127 329 aaKnown RBP2.52□□□□□ -2.01
CHMP4A-208ENST00000534106 PPIHO43447 177 aaKnown RBP2.52□□□□□ -2.01
CHMP4A-208ENST00000534106 SHOX2O60902 331 aaPredicted RBP2.52□□□□□ -2.01
CHMP4A-208ENST00000534106 MPZL1O95297 269 aa2.52□□□□□ -2.01
CHMP4A-208ENST00000534106 SAGP10523 405 aaPredicted RBP2.52□□□□□ -2.01
CHMP4A-208ENST00000534106 HSD3B1P14060 373 aa2.52□□□□□ -2.01
CHMP4A-208ENST00000534106 SELEP16581 610 aa2.52□□□□□ -2.01
CHMP4A-208ENST00000534106 DDX5P17844 614 aaKnown RBP2.52□□□□□ -2.01
CHMP4A-208ENST00000534106 CSNK2A2P19784 350 aaPredicted RBP2.52□□□□□ -2.01
CHMP4A-208ENST00000534106 COX5AP20674 150 aa2.52□□□□□ -2.01
CHMP4A-208ENST00000534106 CALCRP30988 508 aa2.52□□□□□ -2.01
CHMP4A-208ENST00000534106 KRT20P35900 424 aa2.52□□□□□ -2.01
CHMP4A-208ENST00000534106 GGT5P36269 586 aa2.52□□□□□ -2.01
CHMP4A-208ENST00000534106 ALDH3B1P43353 468 aa2.52□□□□□ -2.01
CHMP4A-208ENST00000534106 GPR6P46095 362 aaPredicted RBP2.52□□□□□ -2.01
CHMP4A-208ENST00000534106 PNLIPRP2P54317 469 aa2.52□□□□□ -2.01
CHMP4A-208ENST00000534106 LCN2P80188 198 aa2.52□□□□□ -2.01
CHMP4A-208ENST00000534106 MYBPC1Q00872 1141 aa2.52□□□□□ -2.01
CHMP4A-208ENST00000534106 PSG6Q00889 435 aa2.52□□□□□ -2.01
CHMP4A-208ENST00000534106 GUCY2DQ02846 1103 aa2.52□□□□□ -2.01
CHMP4A-208ENST00000534106 SLC18A2Q05940 514 aa2.52□□□□□ -2.01
CHMP4A-208ENST00000534106 IFFO1Q0D2I5 559 aa2.52□□□□□ -2.01
CHMP4A-208ENST00000534106 RASGEF1BQ0VAM2 473 aa2.52□□□□□ -2.01
CHMP4A-208ENST00000534106 MAD2L1BPQ15013 274 aaPredicted RBP2.52□□□□□ -2.01
CHMP4A-208ENST00000534106 TGFBIQ15582 683 aa2.52□□□□□ -2.01
CHMP4A-208ENST00000534106 TRADDQ15628 312 aa2.52□□□□□ -2.01
CHMP4A-208ENST00000534106 ZNHIT3Q15649 155 aaPredicted RBP2.52□□□□□ -2.01
CHMP4A-208ENST00000534106 PLPPR5Q32ZL2 321 aa2.52□□□□□ -2.01
CHMP4A-208ENST00000534106 NDUFAF6Q330K2 333 aa2.52□□□□□ -2.01
CHMP4A-208ENST00000534106 TMEM95Q3KNT9 176 aa2.52□□□□□ -2.01
CHMP4A-208ENST00000534106 ALKBH6Q3KRA9 238 aa2.52□□□□□ -2.01
CHMP4A-208ENST00000534106 ARL13AQ5H913 290 aaPredicted RBP2.52□□□□□ -2.01
CHMP4A-208ENST00000534106 ZNF311Q5JNZ3 666 aa2.52□□□□□ -2.01
CHMP4A-208ENST00000534106 PAGE2BQ5JRK9 111 aa2.52□□□□□ -2.01
CHMP4A-208ENST00000534106 BEND6Q5SZJ8 279 aaPredicted RBP2.52□□□□□ -2.01
CHMP4A-208ENST00000534106 CEP85LQ5SZL2 805 aa2.52□□□□□ -2.01
CHMP4A-208ENST00000534106 CCNYL2Q5T2Q4 361 aa2.52□□□□□ -2.01
CHMP4A-208ENST00000534106 FBXW9Q5XUX1 488 aa2.52□□□□□ -2.01
CHMP4A-208ENST00000534106 OR52E8Q6IFG1 317 aa2.52□□□□□ -2.01
CHMP4A-208ENST00000534106 LRRC8EQ6NSJ5 796 aa2.52□□□□□ -2.01
CHMP4A-208ENST00000534106 SLC48A1Q6P1K1 146 aa2.52□□□□□ -2.01
CHMP4A-208ENST00000534106 C16orf87Q6PH81 154 aa2.52□□□□□ -2.01
CHMP4A-208ENST00000534106 RBMS3Q6XE24 437 aaKnown RBP2.52□□□□□ -2.01
CHMP4A-208ENST00000534106 C17orf107Q6ZR85 190 aa2.52□□□□□ -2.01
CHMP4A-208ENST00000534106 CCDC121Q6ZUS5 278 aa2.52□□□□□ -2.01
CHMP4A-208ENST00000534106 FRA10AC1Q70Z53 315 aa2.52□□□□□ -2.01
CHMP4A-208ENST00000534106 PEX26Q7Z412 305 aa2.52□□□□□ -2.01
CHMP4A-208ENST00000534106 SPATA21Q7Z572 469 aa2.52□□□□□ -2.01
CHMP4A-208ENST00000534106 GALNT5Q7Z7M9 940 aa2.52□□□□□ -2.01
CHMP4A-208ENST00000534106 MYPOPQ86VE0 399 aaPredicted RBP2.52□□□□□ -2.01
CHMP4A-208ENST00000534106 LRP11Q86VZ4 500 aa2.52□□□□□ -2.01
CHMP4A-208ENST00000534106 TDRPQ86YL5 185 aa2.52□□□□□ -2.01
CHMP4A-208ENST00000534106 GTPBP8Q8N3Z3 284 aaPredicted RBP2.52□□□□□ -2.01
CHMP4A-208ENST00000534106 NRACQ8N912 160 aa2.52□□□□□ -2.01
CHMP4A-208ENST00000534106 OR7G2Q8NG99 324 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms