RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 CALCRP30988 508 aa8.41□□□□□ -1.06
SSBP3-215ENST00000533946 GYS2P54840 703 aa8.41□□□□□ -1.06
SSBP3-215ENST00000533946 CDH11P55287 796 aa8.41□□□□□ -1.06
SSBP3-215ENST00000533946 RIPPLY3P57055 190 aa8.41□□□□□ -1.06
SSBP3-215ENST00000533946 RGS8P57771 180 aaPredicted RBP8.41□□□□□ -1.06
SSBP3-215ENST00000533946 COPZ1P61923 177 aa8.41□□□□□ -1.06
SSBP3-215ENST00000533946 TXNL4AP83876 142 aaKnown RBP8.41□□□□□ -1.06
SSBP3-215ENST00000533946 ARF1P84077 181 aaKnown RBP8.41□□□□□ -1.06
SSBP3-215ENST00000533946 GNA13Q14344 377 aa8.41□□□□□ -1.06
SSBP3-215ENST00000533946 NRF1Q16656 503 aa8.41□□□□□ -1.06
SSBP3-215ENST00000533946 MST1LQ2TV78 715 aa8.41□□□□□ -1.06
SSBP3-215ENST00000533946 ELOA3BQ3SY89 546 aa8.41□□□□□ -1.06
SSBP3-215ENST00000533946 ALG10BQ5I7T1 473 aa8.41□□□□□ -1.06
SSBP3-215ENST00000533946 REP15Q6BDI9 236 aa8.41□□□□□ -1.06
SSBP3-215ENST00000533946 TMEM225Q6GV28 225 aa8.41□□□□□ -1.06
SSBP3-215ENST00000533946 C11orf71Q6IPW1 123 aa8.41□□□□□ -1.06
SSBP3-215ENST00000533946 C6orf89Q6UWU4 347 aa8.41□□□□□ -1.06
SSBP3-215ENST00000533946 LINC00114Q6XXX2 140 aa8.41□□□□□ -1.06
SSBP3-215ENST00000533946 NET1Q7Z628 596 aaPredicted RBP8.41□□□□□ -1.06
SSBP3-215ENST00000533946 SNX32Q86XE0 403 aa8.41□□□□□ -1.06
SSBP3-215ENST00000533946 CALHM3Q86XJ0 350 aa8.41□□□□□ -1.06
SSBP3-215ENST00000533946 TREML1Q86YW5 311 aa8.41□□□□□ -1.06
SSBP3-215ENST00000533946 ARMC8Q8IUR7 673 aa8.41□□□□□ -1.06
SSBP3-215ENST00000533946 LRRC75A-AS1Q8N1F1 130 aa8.41□□□□□ -1.06
SSBP3-215ENST00000533946 LSMEM1Q8N8F7 131 aa8.41□□□□□ -1.06
SSBP3-215ENST00000533946 HIPK4Q8NE63 616 aa8.41□□□□□ -1.06
SSBP3-215ENST00000533946 ELOA3Q8NG57 546 aa8.41□□□□□ -1.06
SSBP3-215ENST00000533946 MFSD8Q8NHS3 518 aa8.41□□□□□ -1.06
SSBP3-215ENST00000533946 TMEM171Q8WVE6 324 aa8.41□□□□□ -1.06
SSBP3-215ENST00000533946 BCL2L2Q92843 193 aaPredicted RBP8.41□□□□□ -1.06
SSBP3-215ENST00000533946 SLC38A4Q969I6 547 aa8.41□□□□□ -1.06
SSBP3-215ENST00000533946 PIGTQ969N2 578 aa8.41□□□□□ -1.06
SSBP3-215ENST00000533946 TMEM45BQ96B21 275 aa8.41□□□□□ -1.06
SSBP3-215ENST00000533946 ZHX1-C8orf76Q96EF9 292 aa8.41□□□□□ -1.06
SSBP3-215ENST00000533946 ZNF583Q96ND8 569 aa8.41□□□□□ -1.06
SSBP3-215ENST00000533946 MCHR1Q99705 422 aa8.41□□□□□ -1.06
SSBP3-215ENST00000533946 PRSS27Q9BQR3 290 aa8.41□□□□□ -1.06
SSBP3-215ENST00000533946 NAA11Q9BSU3 229 aaPredicted RBP8.41□□□□□ -1.06
SSBP3-215ENST00000533946 SLCO5A1Q9H2Y9 848 aa8.41□□□□□ -1.06
SSBP3-215ENST00000533946 ESRP2Q9H6T0 727 aaKnown RBP8.41□□□□□ -1.06
SSBP3-215ENST00000533946 TAS2R16Q9NYV7 291 aa8.41□□□□□ -1.06
SSBP3-215ENST00000533946 UPB1Q9UBR1 384 aa8.41□□□□□ -1.06
SSBP3-215ENST00000533946 LEF1Q9UJU2 399 aaPredicted RBP8.41□□□□□ -1.06
SSBP3-215ENST00000533946 MOKQ9UQ07 419 aa8.41□□□□□ -1.06
SSBP3-215ENST00000533946 SLC9A8Q9Y2E8 581 aa8.41□□□□□ -1.06
SSBP3-215ENST00000533946 SNX13Q9Y5W8 968 aa8.41□□□□□ -1.06
SSBP3-215ENST00000533946 MXRA5Q9NR99 2828 aa8.41□□□□□ -1.06
SSBP3-215ENST00000533946 A0A087WUJ7 227 aa8.4□□□□□ -1.06
SSBP3-215ENST00000533946 KPNA4O00629 521 aaPredicted RBP8.4□□□□□ -1.06
SSBP3-215ENST00000533946 GPR171O14626 319 aa8.4□□□□□ -1.06
SSBP3-215ENST00000533946 ANGPT2O15123 496 aa8.4□□□□□ -1.06
SSBP3-215ENST00000533946 EIF1BO60739 113 aaKnown RBP8.4□□□□□ -1.06
SSBP3-215ENST00000533946 FZD7O75084 574 aa8.4□□□□□ -1.06
SSBP3-215ENST00000533946 SERPINI2O75830 405 aa8.4□□□□□ -1.06
SSBP3-215ENST00000533946 AHSA1O95433 338 aa8.4□□□□□ -1.06
SSBP3-215ENST00000533946 IGFBP1P08833 259 aaPredicted RBP8.4□□□□□ -1.06
SSBP3-215ENST00000533946 PATE4P0C8F1 98 aa8.4□□□□□ -1.06
SSBP3-215ENST00000533946 PAX1P15863 534 aa8.4□□□□□ -1.06
SSBP3-215ENST00000533946 PCSK6P29122 969 aa8.4□□□□□ -1.06
SSBP3-215ENST00000533946 OR1E2P47887 323 aa8.4□□□□□ -1.06
SSBP3-215ENST00000533946 HNRNPA0Q13151 305 aaKnown RBP8.4□□□□□ -1.06
SSBP3-215ENST00000533946 CYP51A1Q16850 503 aa8.4□□□□□ -1.06
SSBP3-215ENST00000533946 TBRG1Q3YBR2 411 aa8.4□□□□□ -1.06
SSBP3-215ENST00000533946 ENTPD8Q5MY95 495 aa8.4□□□□□ -1.06
SSBP3-215ENST00000533946 SHEQ5VZ18 495 aa8.4□□□□□ -1.06
SSBP3-215ENST00000533946 CLEC9AQ6UXN8 241 aa8.4□□□□□ -1.06
SSBP3-215ENST00000533946 DNM1P46Q6ZS02 220 aa8.4□□□□□ -1.06
SSBP3-215ENST00000533946 PRIMA1Q86XR5 153 aa8.4□□□□□ -1.06
SSBP3-215ENST00000533946 NKAIN4Q8IVV8 208 aa8.4□□□□□ -1.06
SSBP3-215ENST00000533946 TMEM123Q8N131 208 aa8.4□□□□□ -1.06
SSBP3-215ENST00000533946 ZCCHC24Q8N2G6 241 aaKnown RBP8.4□□□□□ -1.06
SSBP3-215ENST00000533946 OR1K1Q8NGR3 316 aa8.4□□□□□ -1.06
SSBP3-215ENST00000533946 STK35Q8TDR2 534 aa8.4□□□□□ -1.06
SSBP3-215ENST00000533946 C10orf82Q8WW14 230 aa8.4□□□□□ -1.06
SSBP3-215ENST00000533946 NANOS1Q8WY41 292 aaKnown RBP8.4□□□□□ -1.06
SSBP3-215ENST00000533946 FBXW5Q969U6 566 aa8.4□□□□□ -1.06
SSBP3-215ENST00000533946 LRRC58Q96CX6 371 aa8.4□□□□□ -1.06
SSBP3-215ENST00000533946 MUCL1Q96DR8 90 aa8.4□□□□□ -1.06
SSBP3-215ENST00000533946 ZNF317Q96PQ6 595 aaPredicted RBP8.4□□□□□ -1.06
SSBP3-215ENST00000533946 OR2M2Q96R28 347 aa8.4□□□□□ -1.06
SSBP3-215ENST00000533946 RAD21L1Q9H4I0 556 aa8.4□□□□□ -1.06
SSBP3-215ENST00000533946 RABEP2Q9H5N1 569 aa8.4□□□□□ -1.06
SSBP3-215ENST00000533946 MEPEQ9NQ76 525 aaPredicted RBP8.4□□□□□ -1.06
SSBP3-215ENST00000533946 CMTM6Q9NX76 183 aa8.4□□□□□ -1.06
SSBP3-215ENST00000533946 ADAM21Q9UKJ8 722 aa8.4□□□□□ -1.06
SSBP3-215ENST00000533946 CHD3Q12873 2000 aaKnown RBP8.4□□□□□ -1.06
SSBP3-215ENST00000533946 TRAV36DV7A0A075B6V5 113 aa8.39□□□□□ -1.07
SSBP3-215ENST00000533946 IGHV4-30-2A0A087WSY4 118 aa8.39□□□□□ -1.07
SSBP3-215ENST00000533946 EVPLLA8MZ36 301 aa8.39□□□□□ -1.07
SSBP3-215ENST00000533946 INAFM1C9JVW0 142 aa8.39□□□□□ -1.07
SSBP3-215ENST00000533946 C11orf98E9PRG8 122 aa8.39□□□□□ -1.07
SSBP3-215ENST00000533946 M0R3G1 203 aa8.39□□□□□ -1.07
SSBP3-215ENST00000533946 PLPP3O14495 311 aa8.39□□□□□ -1.07
SSBP3-215ENST00000533946 PIP5K1CO60331 668 aa8.39□□□□□ -1.07
SSBP3-215ENST00000533946 VIMP08670 466 aaKnown RBP8.39□□□□□ -1.07
SSBP3-215ENST00000533946 MPGP29372 298 aa8.39□□□□□ -1.07
SSBP3-215ENST00000533946 PCGF2P35227 344 aa8.39□□□□□ -1.07
SSBP3-215ENST00000533946 RBMXP38159 391 aaKnown RBP8.39□□□□□ -1.07
SSBP3-215ENST00000533946 ARFIP2P53365 341 aa8.39□□□□□ -1.07
SSBP3-215ENST00000533946 SEC24CP53992 1094 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms