RNA–Protein interactions for RNA: ENST00000533774.5

SVIP-205, Transcript of small VCP interacting protein, humanhuman

TSL 3

Gene SVIP, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-205ENST00000533774 ZNF416Q9BWM5 594 aa10.47□□□□□ -0.73
SVIP-205ENST00000533774 LINC00470Q9BZP3 86 aa10.47□□□□□ -0.73
SVIP-205ENST00000533774 PIF1Q9H611 641 aa10.47□□□□□ -0.73
SVIP-205ENST00000533774 SLC35A3Q9Y2D2 325 aa10.47□□□□□ -0.73
SVIP-205ENST00000533774 CACNG2Q9Y698 323 aa10.47□□□□□ -0.73
SVIP-205ENST00000533774 PLXNB1O43157 2135 aa10.46□□□□□ -0.73
SVIP-205ENST00000533774 PRAMEF27A3QJZ7 478 aa10.46□□□□□ -0.73
SVIP-205ENST00000533774 RPL36A-HNRNPH2H7BZ11 118 aa10.46□□□□□ -0.73
SVIP-205ENST00000533774 CRCPO75575 148 aa10.46□□□□□ -0.73
SVIP-205ENST00000533774 ZNF432O94892 652 aa10.46□□□□□ -0.73
SVIP-205ENST00000533774 GLRXP35754 106 aa10.46□□□□□ -0.73
SVIP-205ENST00000533774 ETF1P62495 437 aaKnown RBP10.46□□□□□ -0.73
SVIP-205ENST00000533774 HBA1P69905 142 aa10.46□□□□□ -0.73
SVIP-205ENST00000533774 KCNJ10P78508 379 aa10.46□□□□□ -0.73
SVIP-205ENST00000533774 LCN2P80188 198 aa10.46□□□□□ -0.73
SVIP-205ENST00000533774 BNIP2Q12982 314 aa10.46□□□□□ -0.73
SVIP-205ENST00000533774 HNRNPA0Q13151 305 aaKnown RBP10.46□□□□□ -0.73
SVIP-205ENST00000533774 SLC9A3R2Q15599 337 aa10.46□□□□□ -0.73
SVIP-205ENST00000533774 FXNQ16595 210 aa10.46□□□□□ -0.73
SVIP-205ENST00000533774 GALNTL6Q49A17 601 aa10.46□□□□□ -0.73
SVIP-205ENST00000533774 RBMS3Q6XE24 437 aaKnown RBP10.46□□□□□ -0.73
SVIP-205ENST00000533774 FRRS1Q6ZNA5 592 aa10.46□□□□□ -0.73
SVIP-205ENST00000533774 C6orf120Q7Z4R8 191 aa10.46□□□□□ -0.73
SVIP-205ENST00000533774 R3HCC1LQ7Z5L2 792 aaKnown RBP10.46□□□□□ -0.73
SVIP-205ENST00000533774 KDM8Q8N371 416 aa10.46□□□□□ -0.73
SVIP-205ENST00000533774 ARFGAP2Q8N6H7 521 aa10.46□□□□□ -0.73
SVIP-205ENST00000533774 KRTCAP2Q8N6L1 136 aa10.46□□□□□ -0.73
SVIP-205ENST00000533774 DEFB108BQ8NET1 73 aa10.46□□□□□ -0.73
SVIP-205ENST00000533774 BHLHE22Q8NFJ8 381 aaPredicted RBP10.46□□□□□ -0.73
SVIP-205ENST00000533774 WFDC12Q8WWY7 111 aa10.46□□□□□ -0.73
SVIP-205ENST00000533774 PMM1Q92871 262 aa10.46□□□□□ -0.73
SVIP-205ENST00000533774 TSPAN32Q96QS1 320 aa10.46□□□□□ -0.73
SVIP-205ENST00000533774 RAB17Q9H0T7 212 aa10.46□□□□□ -0.73
SVIP-205ENST00000533774 KCNF1Q9H3M0 494 aa10.46□□□□□ -0.73
SVIP-205ENST00000533774 ZMAT3Q9HA38 289 aaKnown RBP10.46□□□□□ -0.73
SVIP-205ENST00000533774 GPR35Q9HC97 309 aa10.46□□□□□ -0.73
SVIP-205ENST00000533774 EXOSC3Q9NQT5 275 aaKnown RBP10.46□□□□□ -0.73
SVIP-205ENST00000533774 FIS1Q9Y3D6 152 aa10.46□□□□□ -0.73
SVIP-205ENST00000533774 WIPI2Q9Y4P8 454 aa10.46□□□□□ -0.73
SVIP-205ENST00000533774 CLPTM1O96005 669 aa10.45□□□□□ -0.74
SVIP-205ENST00000533774 HLA-HP01893 362 aa10.45□□□□□ -0.74
SVIP-205ENST00000533774 C1QCP02747 245 aa10.45□□□□□ -0.74
SVIP-205ENST00000533774 GPIP06744 558 aa10.45□□□□□ -0.74
SVIP-205ENST00000533774 GSTA1P08263 222 aa10.45□□□□□ -0.74
SVIP-205ENST00000533774 OR12D1P0DN82 309 aa10.45□□□□□ -0.74
SVIP-205ENST00000533774 ZNF14P17017 642 aaPredicted RBP10.45□□□□□ -0.74
SVIP-205ENST00000533774 HTR3AP46098 478 aa10.45□□□□□ -0.74
SVIP-205ENST00000533774 SH3BGRP55822 239 aaPredicted RBP10.45□□□□□ -0.74
SVIP-205ENST00000533774 CCL8P80075 99 aa10.45□□□□□ -0.74
SVIP-205ENST00000533774 PTGR1Q14914 329 aa10.45□□□□□ -0.74
SVIP-205ENST00000533774 CEACAM16Q2WEN9 425 aa10.45□□□□□ -0.74
SVIP-205ENST00000533774 PHYHD1Q5SRE7 291 aa10.45□□□□□ -0.74
SVIP-205ENST00000533774 REP15Q6BDI9 236 aa10.45□□□□□ -0.74
SVIP-205ENST00000533774 TMEM225Q6GV28 225 aa10.45□□□□□ -0.74
SVIP-205ENST00000533774 WDFY1Q8IWB7 410 aa10.45□□□□□ -0.74
SVIP-205ENST00000533774 KIR3DL3Q8N743 410 aa10.45□□□□□ -0.74
SVIP-205ENST00000533774 IL17RDQ8NFM7 739 aa10.45□□□□□ -0.74
SVIP-205ENST00000533774 GTF3AQ92664 365 aaKnown RBP10.45□□□□□ -0.74
SVIP-205ENST00000533774 RAB8BQ92930 207 aa10.45□□□□□ -0.74
SVIP-205ENST00000533774 TMIGD2Q96BF3 282 aa10.45□□□□□ -0.74
SVIP-205ENST00000533774 COQ8BQ96D53 544 aa10.45□□□□□ -0.74
SVIP-205ENST00000533774 RAB39BQ96DA2 213 aa10.45□□□□□ -0.74
SVIP-205ENST00000533774 MMP27Q9H306 513 aa10.45□□□□□ -0.74
SVIP-205ENST00000533774 OR51I1Q9H343 314 aa10.45□□□□□ -0.74
SVIP-205ENST00000533774 ZNF385DQ9H6B1 395 aa10.45□□□□□ -0.74
SVIP-205ENST00000533774 MOV10Q9HCE1 1003 aaKnown RBP10.45□□□□□ -0.74
SVIP-205ENST00000533774 MMP26Q9NRE1 261 aa10.45□□□□□ -0.74
SVIP-205ENST00000533774 ADPRHL2Q9NX46 363 aa10.45□□□□□ -0.74
SVIP-205ENST00000533774 MMP24Q9Y5R2 645 aa10.45□□□□□ -0.74
SVIP-205ENST00000533774 SCN2BO60939 215 aa10.44□□□□□ -0.74
SVIP-205ENST00000533774 AK1P00568 194 aa10.44□□□□□ -0.74
SVIP-205ENST00000533774 SOAT1P35610 550 aa10.44□□□□□ -0.74
SVIP-205ENST00000533774 HPCAL1P37235 193 aa10.44□□□□□ -0.74
SVIP-205ENST00000533774 CAPZA2P47755 286 aa10.44□□□□□ -0.74
SVIP-205ENST00000533774 LAPTM4AQ15012 233 aa10.44□□□□□ -0.74
SVIP-205ENST00000533774 LSM12Q3MHD2 195 aaKnown RBP10.44□□□□□ -0.74
SVIP-205ENST00000533774 ZYG11AQ6WRX3 759 aa10.44□□□□□ -0.74
SVIP-205ENST00000533774 C16orf62Q7Z3J2 963 aa10.44□□□□□ -0.74
SVIP-205ENST00000533774 JAZF1Q86VZ6 243 aa10.44□□□□□ -0.74
SVIP-205ENST00000533774 GSPT2Q8IYD1 628 aaKnown RBP10.44□□□□□ -0.74
SVIP-205ENST00000533774 CLECL1Q8IZS7 167 aa10.44□□□□□ -0.74
SVIP-205ENST00000533774 SLC35G5Q96KT7 338 aa10.44□□□□□ -0.74
SVIP-205ENST00000533774 CCT8L2Q96SF2 557 aa10.44□□□□□ -0.74
SVIP-205ENST00000533774 CITED1Q99966 193 aa10.44□□□□□ -0.74
SVIP-205ENST00000533774 PLEK2Q9NYT0 353 aa10.44□□□□□ -0.74
SVIP-205ENST00000533774 ZNF224Q9NZL3 707 aa10.44□□□□□ -0.74
SVIP-205ENST00000533774 DUSP13Q9UII6 198 aa10.44□□□□□ -0.74
SVIP-205ENST00000533774 LEF1Q9UJU2 399 aaPredicted RBP10.44□□□□□ -0.74
SVIP-205ENST00000533774 NUP50Q9UKX7 468 aa10.44□□□□□ -0.74
SVIP-205ENST00000533774 WDR45Q9Y484 360 aa10.44□□□□□ -0.74
SVIP-205ENST00000533774 DUXAA6NLW8 204 aa10.43□□□□□ -0.74
SVIP-205ENST00000533774 TMEM233B4DJY2 109 aa10.43□□□□□ -0.74
SVIP-205ENST00000533774 CLDN34H7C241 214 aa10.43□□□□□ -0.74
SVIP-205ENST00000533774 CFLARO15519 480 aa10.43□□□□□ -0.74
SVIP-205ENST00000533774 FRS3O43559 492 aa10.43□□□□□ -0.74
SVIP-205ENST00000533774 CHRM4P08173 479 aa10.43□□□□□ -0.74
SVIP-205ENST00000533774 GATA3P23771 443 aa10.43□□□□□ -0.74
SVIP-205ENST00000533774 PCGF2P35227 344 aa10.43□□□□□ -0.74
SVIP-205ENST00000533774 RBMXP38159 391 aaKnown RBP10.43□□□□□ -0.74
SVIP-205ENST00000533774 CRYBB2P43320 205 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms