RNA–Protein interactions for RNA: ENST00000533730.5

CASP4-212, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 1,214 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-212ENST00000533730 AP3M1Q9Y2T2 418 aa6.88□□□□□ -1.31
CASP4-212ENST00000533730 ARL2BPQ9Y2Y0 163 aa6.88□□□□□ -1.31
CASP4-212ENST00000533730 LIPGQ9Y5X9 500 aa6.88□□□□□ -1.31
CASP4-212ENST00000533730 ESPL1Q14674 2120 aa6.88□□□□□ -1.31
CASP4-212ENST00000533730 EML6Q6ZMW3 1958 aa6.88□□□□□ -1.31
CASP4-212ENST00000533730 DSPPQ9NZW4 1301 aa6.87□□□□□ -1.31
CASP4-212ENST00000533730 TEX13CA0A0J9YWL9 993 aa6.87□□□□□ -1.31
CASP4-212ENST00000533730 CLEC18AA5D8T8 446 aa6.87□□□□□ -1.31
CASP4-212ENST00000533730 NPIPB13A6NJU9 1138 aa6.87□□□□□ -1.31
CASP4-212ENST00000533730 NPIPB5A8MRT5 1133 aa6.87□□□□□ -1.31
CASP4-212ENST00000533730 A8MV72 311 aaPredicted RBP6.87□□□□□ -1.31
CASP4-212ENST00000533730 AHRRA9YTQ3 701 aa6.87□□□□□ -1.31
CASP4-212ENST00000533730 NPIPB4C9JG80 1138 aa6.87□□□□□ -1.31
CASP4-212ENST00000533730 CCL21O00585 134 aa6.87□□□□□ -1.31
CASP4-212ENST00000533730 LRRTM2O43300 516 aa6.87□□□□□ -1.31
CASP4-212ENST00000533730 FCMRO60667 390 aa6.87□□□□□ -1.31
CASP4-212ENST00000533730 UGT2B17O75795 530 aa6.87□□□□□ -1.31
CASP4-212ENST00000533730 WISP2O76076 250 aa6.87□□□□□ -1.31
CASP4-212ENST00000533730 NUDT14O95848 222 aa6.87□□□□□ -1.31
CASP4-212ENST00000533730 BCHEP06276 602 aa6.87□□□□□ -1.31
CASP4-212ENST00000533730 DBIP07108 87 aaKnown RBP6.87□□□□□ -1.31
CASP4-212ENST00000533730 CHRM4P08173 479 aa6.87□□□□□ -1.31
CASP4-212ENST00000533730 TFPTP0C1Z6 253 aa6.87□□□□□ -1.31
CASP4-212ENST00000533730 ETS2P15036 469 aa6.87□□□□□ -1.31
CASP4-212ENST00000533730 CPN1P15169 458 aa6.87□□□□□ -1.31
CASP4-212ENST00000533730 ZNF17P17021 662 aa6.87□□□□□ -1.31
CASP4-212ENST00000533730 RPS4Y1P22090 263 aaKnown RBP6.87□□□□□ -1.31
CASP4-212ENST00000533730 PRDX6P30041 224 aa6.87□□□□□ -1.31
CASP4-212ENST00000533730 MSX2P35548 267 aaPredicted RBP6.87□□□□□ -1.31
CASP4-212ENST00000533730 RPS19P39019 145 aaKnown RBP6.87□□□□□ -1.31
CASP4-212ENST00000533730 EIF1P41567 113 aaKnown RBP6.87□□□□□ -1.31
CASP4-212ENST00000533730 SLC6A8P48029 635 aa6.87□□□□□ -1.31
CASP4-212ENST00000533730 EEFSECP57772 596 aaKnown RBP6.87□□□□□ -1.31
CASP4-212ENST00000533730 KCNJ10P78508 379 aa6.87□□□□□ -1.31
CASP4-212ENST00000533730 ZNF117Q03924 483 aa6.87□□□□□ -1.31
CASP4-212ENST00000533730 CRYZQ08257 329 aaKnown RBP6.87□□□□□ -1.31
CASP4-212ENST00000533730 RBBP4Q09028 425 aa6.87□□□□□ -1.31
CASP4-212ENST00000533730 FGFBP1Q14512 234 aa6.87□□□□□ -1.31
CASP4-212ENST00000533730 LARS2Q15031 903 aaKnown RBP6.87□□□□□ -1.31
CASP4-212ENST00000533730 CD226Q15762 336 aa6.87□□□□□ -1.31
CASP4-212ENST00000533730 BCL2A1Q16548 175 aa6.87□□□□□ -1.31
CASP4-212ENST00000533730 SYPL1Q16563 259 aa6.87□□□□□ -1.31
CASP4-212ENST00000533730 C3AR1Q16581 482 aa6.87□□□□□ -1.31
CASP4-212ENST00000533730 GXYLT1Q4G148 440 aa6.87□□□□□ -1.31
CASP4-212ENST00000533730 LIN52Q52LA3 116 aa6.87□□□□□ -1.31
CASP4-212ENST00000533730 EIPR1Q53HC9 387 aa6.87□□□□□ -1.31
CASP4-212ENST00000533730 GKAP1Q5VSY0 366 aaPredicted RBP6.87□□□□□ -1.31
CASP4-212ENST00000533730 RAET1LQ5VY80 246 aa6.87□□□□□ -1.31
CASP4-212ENST00000533730 REP15Q6BDI9 236 aa6.87□□□□□ -1.31
CASP4-212ENST00000533730 REEP3Q6NUK4 255 aa6.87□□□□□ -1.31
CASP4-212ENST00000533730 CLEC18BQ6UXF7 455 aa6.87□□□□□ -1.31
CASP4-212ENST00000533730 ARPINQ7Z6K5 226 aa6.87□□□□□ -1.31
CASP4-212ENST00000533730 PIGWQ7Z7B1 504 aa6.87□□□□□ -1.31
CASP4-212ENST00000533730 YRDCQ86U90 279 aaKnown RBP6.87□□□□□ -1.31
CASP4-212ENST00000533730 DOLPP1Q86YN1 238 aa6.87□□□□□ -1.31
CASP4-212ENST00000533730 MSRB3Q8IXL7 192 aa6.87□□□□□ -1.31
CASP4-212ENST00000533730 ZNF440Q8IYI8 595 aa6.87□□□□□ -1.31
CASP4-212ENST00000533730 ANKFN1Q8N957 763 aa6.87□□□□□ -1.31
CASP4-212ENST00000533730 GATSQ8NAP1 163 aa6.87□□□□□ -1.31
CASP4-212ENST00000533730 CLEC18CQ8NCF0 446 aa6.87□□□□□ -1.31
CASP4-212ENST00000533730 OR8J3Q8NGG0 315 aa6.87□□□□□ -1.31
CASP4-212ENST00000533730 OR5W2Q8NH69 310 aa6.87□□□□□ -1.31
CASP4-212ENST00000533730 BBS10Q8TAM1 723 aa6.87□□□□□ -1.31
CASP4-212ENST00000533730 SLC38A5Q8WUX1 472 aa6.87□□□□□ -1.31
CASP4-212ENST00000533730 INTS12Q96CB8 462 aaKnown RBP6.87□□□□□ -1.31
CASP4-212ENST00000533730 LRRC58Q96CX6 371 aa6.87□□□□□ -1.31
CASP4-212ENST00000533730 ARSGQ96EG1 525 aa6.87□□□□□ -1.31
CASP4-212ENST00000533730 TIMP4Q99727 224 aa6.87□□□□□ -1.31
CASP4-212ENST00000533730 NPAS1Q99742 590 aa6.87□□□□□ -1.31
CASP4-212ENST00000533730 THUMPD3Q9BV44 507 aaKnown RBP6.87□□□□□ -1.31
CASP4-212ENST00000533730 RTN4RQ9BZR6 473 aa6.87□□□□□ -1.31
CASP4-212ENST00000533730 LAT2Q9GZY6 243 aa6.87□□□□□ -1.31
CASP4-212ENST00000533730 SAP30LQ9HAJ7 183 aa6.87□□□□□ -1.31
CASP4-212ENST00000533730 BCL2L10Q9HD36 194 aa6.87□□□□□ -1.31
CASP4-212ENST00000533730 EXOSC3Q9NQT5 275 aaKnown RBP6.87□□□□□ -1.31
CASP4-212ENST00000533730 KCNE5Q9UJ90 142 aa6.87□□□□□ -1.31
CASP4-212ENST00000533730 IFT52Q9Y366 437 aa6.87□□□□□ -1.31
CASP4-212ENST00000533730 L3MBTL1Q9Y468 752 aa6.87□□□□□ -1.31
CASP4-212ENST00000533730 NINQ8N4C6 2090 aa6.87□□□□□ -1.31
CASP4-212ENST00000533730 NPIPA5A0A0B4J1W7 369 aa6.86□□□□□ -1.31
CASP4-212ENST00000533730 LOC100653049A0A140TA62 436 aa6.86□□□□□ -1.31
CASP4-212ENST00000533730 PRORSD1PA6NEY8 169 aa6.86□□□□□ -1.31
CASP4-212ENST00000533730 NPIPA7E9PJI5 369 aa6.86□□□□□ -1.31
CASP4-212ENST00000533730 FBP2O00757 339 aa6.86□□□□□ -1.31
CASP4-212ENST00000533730 NDUFAB1O14561 156 aa6.86□□□□□ -1.31
CASP4-212ENST00000533730 SPRY2O43597 315 aa6.86□□□□□ -1.31
CASP4-212ENST00000533730 ZIC3O60481 467 aa6.86□□□□□ -1.31
CASP4-212ENST00000533730 SHOX2O60902 331 aaPredicted RBP6.86□□□□□ -1.31
CASP4-212ENST00000533730 KRT34O76011 436 aa6.86□□□□□ -1.31
CASP4-212ENST00000533730 FAM107AO95990 144 aa6.86□□□□□ -1.31
CASP4-212ENST00000533730 NPIPA8P0DM63 369 aa6.86□□□□□ -1.31
CASP4-212ENST00000533730 COX4I1P13073 169 aa6.86□□□□□ -1.31
CASP4-212ENST00000533730 UQCRBP14927 111 aa6.86□□□□□ -1.31
CASP4-212ENST00000533730 IL7RP16871 459 aa6.86□□□□□ -1.31
CASP4-212ENST00000533730 PGCP20142 388 aa6.86□□□□□ -1.31
CASP4-212ENST00000533730 HOXA5P20719 270 aa6.86□□□□□ -1.31
CASP4-212ENST00000533730 ME2P23368 584 aa6.86□□□□□ -1.31
CASP4-212ENST00000533730 GATA3P23771 443 aa6.86□□□□□ -1.31
CASP4-212ENST00000533730 ELK4P28324 431 aa6.86□□□□□ -1.31
CASP4-212ENST00000533730 SMSP52788 366 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 117.5 ms