RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 SYT14P1Q58G82 188 aa11.32□□□□□ -0.6
BDNF-218ENST00000533246 TMEM164Q5U3C3 297 aa11.32□□□□□ -0.6
BDNF-218ENST00000533246 DPY19L4Q7Z388 723 aa11.32□□□□□ -0.6
BDNF-218ENST00000533246 OR51Q1Q8NH59 317 aa11.32□□□□□ -0.6
BDNF-218ENST00000533246 PFN4Q8NHR9 129 aa11.32□□□□□ -0.6
BDNF-218ENST00000533246 RBM24Q9BX46 236 aaKnown RBP11.32□□□□□ -0.6
BDNF-218ENST00000533246 OR52A5Q9H2C5 316 aa11.32□□□□□ -0.6
BDNF-218ENST00000533246 C6orf106Q9H6K1 298 aaPredicted RBP11.32□□□□□ -0.6
BDNF-218ENST00000533246 ZNF275Q9NSD4 429 aaPredicted RBP11.32□□□□□ -0.6
BDNF-218ENST00000533246 NEU3Q9UQ49 428 aa11.32□□□□□ -0.6
BDNF-218ENST00000533246 F5H5K5 113 aa11.32□□□□□ -0.6
BDNF-218ENST00000533246 C1QBP02746 253 aa11.32□□□□□ -0.6
BDNF-218ENST00000533246 AMY2AP04746 511 aa11.32□□□□□ -0.6
BDNF-218ENST00000533246 CHRM4P08173 479 aa11.32□□□□□ -0.6
BDNF-218ENST00000533246 OTX2P32243 289 aa11.32□□□□□ -0.6
BDNF-218ENST00000533246 BLOC1S1P78537 153 aa11.32□□□□□ -0.6
BDNF-218ENST00000533246 PCGF3Q3KNV8 242 aa11.32□□□□□ -0.6
BDNF-218ENST00000533246 FAM109BQ6ICB4 259 aaPredicted RBP11.32□□□□□ -0.6
BDNF-218ENST00000533246 C10orf111Q8N326 155 aa11.32□□□□□ -0.6
BDNF-218ENST00000533246 ZNF454Q8N9F8 522 aa11.32□□□□□ -0.6
BDNF-218ENST00000533246 OR2A1Q8NGT9 310 aa11.32□□□□□ -0.6
BDNF-218ENST00000533246 MEGF10Q96KG7 1140 aa11.32□□□□□ -0.6
BDNF-218ENST00000533246 PDCD1LG2Q9BQ51 273 aa11.32□□□□□ -0.6
BDNF-218ENST00000533246 HDAC8Q9BY41 377 aa11.32□□□□□ -0.6
BDNF-218ENST00000533246 NPIPA2E9PIF3 369 aa11.32□□□□□ -0.6
BDNF-218ENST00000533246 NPIPA3F8WFD2 350 aa11.32□□□□□ -0.6
BDNF-218ENST00000533246 SULT1C2O00338 296 aa11.32□□□□□ -0.6
BDNF-218ENST00000533246 MAN2B1O00754 1011 aa11.32□□□□□ -0.6
BDNF-218ENST00000533246 ZNF208O43345 1280 aa11.32□□□□□ -0.6
BDNF-218ENST00000533246 AKR1C4P17516 323 aa11.32□□□□□ -0.6
BDNF-218ENST00000533246 EMP2P54851 167 aa11.32□□□□□ -0.6
BDNF-218ENST00000533246 TMEM52BQ4KMG9 183 aa11.32□□□□□ -0.6
BDNF-218ENST00000533246 RHOUQ7L0Q8 258 aa11.32□□□□□ -0.6
BDNF-218ENST00000533246 OR13C3Q8NGS6 347 aa11.32□□□□□ -0.6
BDNF-218ENST00000533246 ATOH1Q92858 354 aaPredicted RBP11.32□□□□□ -0.6
BDNF-218ENST00000533246 ZG16BQ96DA0 208 aa11.32□□□□□ -0.6
BDNF-218ENST00000533246 CNRIP1Q96F85 164 aaPredicted RBP11.32□□□□□ -0.6
BDNF-218ENST00000533246 ST6GAL2Q96JF0 529 aa11.32□□□□□ -0.6
BDNF-218ENST00000533246 SGPP1Q9BX95 441 aa11.32□□□□□ -0.6
BDNF-218ENST00000533246 CHST8Q9H2A9 424 aa11.32□□□□□ -0.6
BDNF-218ENST00000533246 C19orf25Q9UFG5 118 aaPredicted RBP11.32□□□□□ -0.6
BDNF-218ENST00000533246 ADAM29Q9UKF5 820 aa11.32□□□□□ -0.6
BDNF-218ENST00000533246 KLK4Q9Y5K2 254 aa11.32□□□□□ -0.6
BDNF-218ENST00000533246 ROS1P08922 2347 aa11.32□□□□□ -0.6
BDNF-218ENST00000533246 G3V3Y1 287 aa11.32□□□□□ -0.6
BDNF-218ENST00000533246 ARPC1BO15143 372 aaKnown RBP11.32□□□□□ -0.6
BDNF-218ENST00000533246 MRPS14O60783 128 aaKnown RBP11.32□□□□□ -0.6
BDNF-218ENST00000533246 RP2O75695 350 aa11.32□□□□□ -0.6
BDNF-218ENST00000533246 GPX5O75715 221 aa11.32□□□□□ -0.6
BDNF-218ENST00000533246 PDE7AQ13946 482 aa11.32□□□□□ -0.6
BDNF-218ENST00000533246 COL28A1Q2UY09 1125 aa11.32□□□□□ -0.6
BDNF-218ENST00000533246 TMEM65Q6PI78 240 aa11.32□□□□□ -0.6
BDNF-218ENST00000533246 ARL14Q8N4G2 192 aa11.32□□□□□ -0.6
BDNF-218ENST00000533246 OR7G2Q8NG99 324 aa11.32□□□□□ -0.6
BDNF-218ENST00000533246 ACOT12Q8WYK0 555 aa11.32□□□□□ -0.6
BDNF-218ENST00000533246 ELMOD3Q96FG2 381 aa11.32□□□□□ -0.6
BDNF-218ENST00000533246 SLC35A4Q96G79 324 aa11.32□□□□□ -0.6
BDNF-218ENST00000533246 PGAM5Q96HS1 289 aa11.32□□□□□ -0.6
BDNF-218ENST00000533246 SLC6A18Q96N87 628 aa11.32□□□□□ -0.6
BDNF-218ENST00000533246 OR5B2Q96R09 309 aa11.32□□□□□ -0.6
BDNF-218ENST00000533246 ZMAT3Q9HA38 289 aaKnown RBP11.32□□□□□ -0.6
BDNF-218ENST00000533246 ACAD8Q9UKU7 415 aa11.32□□□□□ -0.6
BDNF-218ENST00000533246 IGHV3-20A0A0C4DH32 117 aa11.31□□□□□ -0.6
BDNF-218ENST00000533246 F5H0A9 414 aaPredicted RBP11.31□□□□□ -0.6
BDNF-218ENST00000533246 CREBL2O60519 120 aaPredicted RBP11.31□□□□□ -0.6
BDNF-218ENST00000533246 GATBO75879 557 aaKnown RBP11.31□□□□□ -0.6
BDNF-218ENST00000533246 SCGNO76038 276 aa11.31□□□□□ -0.6
BDNF-218ENST00000533246 CBX7O95931 251 aa11.31□□□□□ -0.6
BDNF-218ENST00000533246 SRYQ05066 204 aa11.31□□□□□ -0.6
BDNF-218ENST00000533246 KCNAB1Q14722 419 aa11.31□□□□□ -0.6
BDNF-218ENST00000533246 SLC18B1Q6NT16 456 aa11.31□□□□□ -0.6
BDNF-218ENST00000533246 DUS3LQ96G46 650 aaKnown RBP11.31□□□□□ -0.6
BDNF-218ENST00000533246 Q96M85 177 aa11.31□□□□□ -0.6
BDNF-218ENST00000533246 PRDM9Q9NQV7 894 aa11.31□□□□□ -0.6
BDNF-218ENST00000533246 METTL15A6NJ78 407 aa11.31□□□□□ -0.6
BDNF-218ENST00000533246 ARPC5O15511 151 aa11.31□□□□□ -0.6
BDNF-218ENST00000533246 FGF17O60258 216 aa11.31□□□□□ -0.6
BDNF-218ENST00000533246 ZNF217O75362 1048 aa11.31□□□□□ -0.6
BDNF-218ENST00000533246 SIX6O95475 246 aa11.31□□□□□ -0.6
BDNF-218ENST00000533246 C1QCP02747 245 aa11.31□□□□□ -0.6
BDNF-218ENST00000533246 SCG5P05408 212 aa11.31□□□□□ -0.6
BDNF-218ENST00000533246 HOXB3P14651 431 aaPredicted RBP11.31□□□□□ -0.6
BDNF-218ENST00000533246 JUNBP17275 347 aaPredicted RBP11.31□□□□□ -0.6
BDNF-218ENST00000533246 PTAFRP25105 342 aa11.31□□□□□ -0.6
BDNF-218ENST00000533246 S100GP29377 79 aa11.31□□□□□ -0.6
BDNF-218ENST00000533246 FOXK2Q01167 660 aa11.31□□□□□ -0.6
BDNF-218ENST00000533246 SPOCK1Q08629 439 aa11.31□□□□□ -0.6
BDNF-218ENST00000533246 KANSL1Q7Z3B3 1105 aa11.31□□□□□ -0.6
BDNF-218ENST00000533246 UCN3Q969E3 161 aa11.31□□□□□ -0.6
BDNF-218ENST00000533246 POM121Q96HA1 1249 aa11.31□□□□□ -0.6
BDNF-218ENST00000533246 PAPOLGQ9BWT3 736 aaKnown RBP11.31□□□□□ -0.6
BDNF-218ENST00000533246 UBQLN4Q9NRR5 601 aa11.31□□□□□ -0.6
BDNF-218ENST00000533246 TMEFF2Q9UIK5 374 aaPredicted RBP11.31□□□□□ -0.6
BDNF-218ENST00000533246 KCNE3Q9Y6H6 103 aa11.31□□□□□ -0.6
BDNF-218ENST00000533246 CDHR4A6H8M9 788 aa11.31□□□□□ -0.6
BDNF-218ENST00000533246 LINC01565O15544 149 aa11.31□□□□□ -0.6
BDNF-218ENST00000533246 IL1AP01583 271 aa11.31□□□□□ -0.6
BDNF-218ENST00000533246 ZNF43P17038 809 aa11.31□□□□□ -0.6
BDNF-218ENST00000533246 SLC2A5P22732 501 aa11.31□□□□□ -0.6
BDNF-218ENST00000533246 PRPS1P60891 318 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms